Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20395 Beta vulgaris HOM05D007285 ORTHO05D009224 2.7e-50 201.8 112 100.0
AUR62017028 Chenopodium quinoa HOM05D007285 ORTHO05D009224 2.2e-47 192.2 112 95.5
Ah.09g237440 Amaranthus hybridus HOM05D007285 ORTHO05D009224 6.7e-41 170.6 112 81.2
Hund23773 Selenicereus undatus HOM05D007285 ORTHO05D009224 2.7e-34 148.7 112 74.1
Rhsim02G0132100 Rhododendron simsii HOM05D007285 ORTHO05D009224 6.9e-30 134.0 104 71.2
Prupe.4G049200 Prunus persica HOM05D007285 ORTHO05D009224 2.0e-29 132.5 107 67.3
RcHm_v2.0_Chr5g0008721 Rosa chinensis HOM05D007285 ORTHO05D009224 2.0e-29 132.5 107 66.4
COL.COLO4_31450 Corchorus olitorius HOM05D007285 ORTHO05D009224 2.6e-29 132.1 103 70.9
Actinidia07587 Actinidia chinensis HOM05D007285 ORTHO05D009224 3.4e-29 131.7 103 72.8
Hma1.2p1_0208F.1_g088230 Hydrangea macrophylla HOM05D007285 ORTHO05D009224 4.5e-29 131.3 104 69.2
Atru.chr10.1858 Acer truncatum HOM05D007285 ORTHO05D009224 1.0e-28 130.2 112 63.4
Gohir.D06G133300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.0e-28 130.2 103 68.9
Nitab4.5_0005745g0020 Nicotiana tabacum HOM05D007285 ORTHO05D009224 1.3e-28 129.8 112 65.2
Gorai.010G155100 Gossypium raimondii HOM05D007285 ORTHO05D009224 1.7e-28 129.4 103 68.9
Thecc.06G185100 Theobroma cacao HOM05D007285 ORTHO05D009224 1.7e-28 129.4 105 69.5
Ciclev10017252m.g Citrus clementina HOM05D007285 ORTHO05D009224 2.2e-28 129.0 103 68.9
Sopen02g022850 Solanum pennellii HOM05D007285 ORTHO05D009224 3.8e-28 128.3 109 65.1
Solyc02g078010.4 Solanum lycopersicum HOM05D007285 ORTHO05D009224 5.0e-28 127.9 109 65.1
CAN.G529.14 Capsicum annuum HOM05D007285 ORTHO05D009224 1.1e-27 126.7 104 67.3
Gohir.A06G129300 Gossypium hirsutum HOM05D007285 ORTHO05D009224 1.1e-27 126.7 103 68.0
Potri.004G045400 Populus trichocarpa HOM05D007285 ORTHO05D009224 1.1e-27 126.7 100 66.0
Actinidia26129 Actinidia chinensis HOM05D007285 ORTHO05D009224 1.4e-27 126.3 103 69.9
FAN16G1611 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.4e-27 126.3 101 66.3
FAN21G1653 Fragaria x ananassa HOM05D007285 ORTHO05D009224 1.4e-27 126.3 101 66.3
Ca_18554_v3 Cicer arietinum L. HOM05D007285 ORTHO05D009224 1.9e-27 125.9 104 67.3
CiPaw.09G061300 Carya illinoinensis HOM05D007285 ORTHO05D009224 2.5e-27 125.6 113 64.6
Cc02_g13540 Coffea canephora HOM05D007285 ORTHO05D009224 2.5e-27 125.6 102 67.6
MD00G1116000 Malus domestica HOM05D007285 ORTHO05D009224 2.5e-27 125.6 107 63.6
Dinv40575 Davidia involucrata HOM05D007285 ORTHO05D009224 7.2e-27 124.0 109 64.2
FvH4_3g08990 Fragaria vesca HOM05D007285 ORTHO05D009224 7.2e-27 124.0 101 65.3
Sc05g0007570 Simmondsia chinensis HOM05D007285 ORTHO05D009224 7.2e-27 124.0 113 65.5
Lj4g0016922 Lotus japonicus HOM05D007285 ORTHO05D009224 9.4e-27 123.6 113 64.6
Lalb_Chr15g0089751 Lupinus albus HOM05D007285 ORTHO05D009224 9.4e-27 123.6 99 68.7
MD10G1292600 Malus domestica HOM05D007285 ORTHO05D009224 9.4e-27 123.6 105 63.8
THA.LOC104820545 Tarenaya hassleriana HOM05D007285 ORTHO05D009224 2.1e-26 122.5 103 64.1
FAN25G3510 Fragaria x ananassa HOM05D007285 ORTHO05D009224 2.7e-26 122.1 105 63.8
PGR042G2867 Punica granatum HOM05D007285 ORTHO05D009224 2.7e-26 122.1 111 60.4
Glyma.07G198400 Glycine max HOM05D007285 ORTHO05D009224 4.7e-26 121.3 100 70.0
Peaxi162Scf00623g00519 Petunia axillaris HOM05D007285 ORTHO05D009224 6.1e-26 120.9 104 64.4
Phvul.002G229600 Phaseolus vulgaris HOM05D007285 ORTHO05D009224 6.1e-26 120.9 114 61.4
CSS0032734 Camellia sinensis var. sinensis HOM05D007285 ORTHO05D009224 8.0e-26 120.6 105 65.7
arahy.Tifrunner.gnm1.ann1.J7N80D Arachis hypogaea HOM05D007285 ORTHO05D009224 1.0e-25 120.2 113 61.9
arahy.Tifrunner.gnm1.ann1.VSLT1W Arachis hypogaea HOM05D007285 ORTHO05D009224 1.0e-25 120.2 113 61.9
CsaV3_1G012400 Cucumis sativus L. HOM05D007285 ORTHO05D009224 1.4e-25 119.8 103 66.0
SalBow8G5072 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.8e-25 119.4 104 64.4
Sed0014393 Sechium edule HOM05D007285 ORTHO05D009224 1.8e-25 119.4 112 62.5
DCAR_008032 Daucus carota HOM05D007285 ORTHO05D009224 2.3e-25 119.0 102 63.7
Migut.M01131 Erythranthe guttata HOM05D007285 ORTHO05D009224 3.9e-25 118.2 103 63.1
ClCG03G008150 Citrullus lanatus HOM05D007285 ORTHO05D009224 6.7e-25 117.5 103 66.0
TWI63G1057 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 8.8e-25 117.1 106 59.4
Manes.17G046800 Manihot esculenta HOM05D007285 ORTHO05D009224 1.1e-24 116.7 96 66.7
VMungo0251G0987 Vigna mungo HOM05D007285 ORTHO05D009224 1.1e-24 116.7 112 59.8
Medtr4g088680 Medicago truncatula HOM05D007285 ORTHO05D009224 2.6e-24 115.5 98 65.3
Lsat_1_v5_gn_4_52261 Lactuca sativa HOM05D007285 ORTHO05D009224 3.3e-24 115.2 113 61.9
Glyma.13G178000 Glycine max HOM05D007285 ORTHO05D009224 4.4e-24 114.8 100 66.0
MSTRG.7339 Avicennia marina HOM05D007285 ORTHO05D009224 5.7e-24 114.4 99 64.6
Dinv17325 Davidia involucrata HOM05D007285 ORTHO05D009224 7.4e-24 114.0 103 64.1
PSO541G0778 Papaver somniferum HOM05D007285 ORTHO05D009224 9.7e-24 113.6 103 62.1
TWI38G2229 Tripterygium wilfordii HOM05D007285 ORTHO05D009224 9.7e-24 113.6 106 57.5
Aa31LG6G10160 Aethionema arabicum HOM05D007285 ORTHO05D009224 1.3e-23 113.2 106 58.5
Eucgr.E03264 Eucalyptus grandis HOM05D007285 ORTHO05D009224 1.3e-23 113.2 111 58.6
Sed0001788 Sechium edule HOM05D007285 ORTHO05D009224 1.3e-23 113.2 103 62.1
SGA_v2.0_scaffold100G29692 Striga asiatica HOM05D007285 ORTHO05D009224 1.3e-23 113.2 104 62.5
TAR626G1757 Trochodendron aralioides HOM05D007285 ORTHO05D009224 1.3e-23 113.2 112 57.1
BolC3t19748H Brassica oleracea HOM05D007285 ORTHO05D009224 1.7e-23 112.8 103 61.2
TPR.G16329 Trifolium pratense HOM05D007285 ORTHO05D009224 1.7e-23 112.8 102 62.7
CARHR027740 Cardamine hirsuta HOM05D007285 ORTHO05D009224 2.8e-23 112.1 103 59.2
HanXRQChr14g0435131 Helianthus annuus HOM05D007285 ORTHO05D009224 2.8e-23 112.1 99 62.6
Carub.0001s2669 Capsella rubella HOM05D007285 ORTHO05D009224 3.7e-23 111.7 103 55.3
CANSAT35G0751 Cannabis sativa HOM05D007285 ORTHO05D009224 1.4e-22 109.8 101 62.4
Psat7g114520 Pisum sativum HOM05D007285 ORTHO05D009224 1.8e-22 109.4 102 61.8
unitig_27.g24965 Utricularia gibba HOM05D007285 ORTHO05D009224 1.8e-22 109.4 99 59.6
C05p27060 Brassica napus HOM05D007285 ORTHO05D009224 3.1e-22 108.6 107 56.1
A09p37820 Brassica napus HOM05D007285 ORTHO05D009224 5.3e-22 107.8 107 55.1
BraA09t39294Z Brassica rapa HOM05D007285 ORTHO05D009224 5.3e-22 107.8 107 55.1
Nn1g04136 Nelumbo nucifera HOM05D007285 ORTHO05D009224 5.3e-22 107.8 101 59.4
BcaB07g32433 Brassica carinata HOM05D007285 ORTHO05D009224 7.0e-22 107.5 103 56.3
AL1G41800 Arabidopsis lyrata HOM05D007285 ORTHO05D009224 9.1e-22 107.1 103 56.3
AT1G28250 Arabidopsis thaliana HOM05D007285 ORTHO05D009224 1.2e-21 106.7 103 56.3
BcaC05g26830 Brassica carinata HOM05D007285 ORTHO05D009224 1.2e-21 106.7 107 54.2
Thhalv10009792m.g Eutrema salsugineum HOM05D007285 ORTHO05D009224 3.5e-21 105.1 112 56.2
Sabra04G0028300 Salix brachista HOM05D007285 ORTHO05D009224 1.9e-19 99.4 152 42.1
BcaC01g00030 Brassica carinata HOM05D007285 ORTHO05D009224 3.2e-19 98.6 129 48.8
CDE01G0551 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 9.4e-19 97.1 93 54.8
BolC5t31425H Brassica oleracea HOM05D007285 ORTHO05D009224 1.2e-18 96.7 125 46.4
HPP92_007016 Vanilla planifolia HOM05D007285 ORTHO05D009224 1.6e-18 96.3 92 59.8
Haze_06424 Corylus avellana HOM05D007285 ORTHO05D009224 4.7e-18 94.7 82 65.9
PGSC0003DMG401029703 Solanum tuberosum HOM05D007285 ORTHO05D009224 6.1e-18 94.4 97 58.8
QL05p041285 Quercus lobata HOM05D007285 ORTHO05D009224 8.0e-18 94.0 79 64.6
vmacro15913 Vaccinium macrocarpon HOM05D007285 ORTHO05D009224 3.3e-16 88.6 80 63.8
ATR0763G085 Amborella trichopoda HOM05D007285 ORTHO05D009224 1.7e-15 86.3 107 48.6
Zm00001eb305570 Zea mays HOM05D007285 ORTHO05D009224 2.8e-15 85.5 102 50.0
BcaB03g12118 Brassica carinata HOM05D007285 ORTHO05D009224 4.8e-15 84.7 82 57.3
SEGI_38595 Sequoiadendron giganteum HOM05D007285 ORTHO05D009224 1.1e-14 83.6 98 49.0
DCAR_004065 Daucus carota HOM05D007285 ORTHO05D009224 1.4e-14 83.2 83 60.2
ECA234G4273 Erigeron canadensis HOM05D007285 ORTHO05D009224 2.4e-14 82.4 83 56.6
MELO3C002614.2 Cucumis melo HOM05D007285 ORTHO05D009224 2.7e-13 79.0 60 70.0
SalBow8G3155 Salvia bowleyana HOM05D007285 ORTHO05D009224 1.3e-12 76.6 71 60.6
Pp3c8_510 Physcomitrium patens HOM05D007285 ORTHO05D009224 2.2e-12 75.9 103 46.6
Mapoly0007s0165 Marchantia polymorpha HOM05D007285 ORTHO05D009224 6.5e-12 74.3 95 49.5
C03p74970 Brassica napus HOM05D007285 ORTHO05D009224 3.6e-10 68.6 110 42.7
Os07g0299600 Oryza sativa ssp. japonica HOM05D007285 ORTHO05D009224 4.7e-10 68.2 75 53.3
CDE12G0235 Ceratophyllum demersum HOM05D007285 ORTHO05D009224 1.8e-09 66.2 93 45.2
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 5.4e-06 54.7 100 40.0


User provided reference genes

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