Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20347 Beta vulgaris HOM05D006332 ORTHO05D008421 6.5e-252 873.6 456 100.0
AUR62016979 Chenopodium quinoa HOM05D006332 ORTHO05D008421 6.9e-201 704.1 426 84.7
AUR62014792 Chenopodium quinoa HOM05D006332 ORTHO05D008421 1.1e-195 686.8 435 82.8
Actinidia01892 Actinidia chinensis HOM05D006332 ORTHO05D008421 1.0e-175 620.5 433 72.7
GSVIVG01002030001 Vitis vinifera HOM05D006332 ORTHO05D008421 1.3e-172 610.1 431 71.9
Lj1C1207T6 Lonicera japonica HOM05D006332 ORTHO05D008421 2.3e-172 609.4 430 71.4
Dinv07538 Davidia involucrata HOM05D006332 ORTHO05D008421 8.2e-170 600.9 431 70.8
Cc02_g13080 Coffea canephora HOM05D006332 ORTHO05D008421 1.8e-169 599.7 429 71.6
TAR629G2846 Trochodendron aralioides HOM05D006332 ORTHO05D008421 2.4e-169 599.4 426 71.4
Cpa.g.sc27.66 Carica papaya HOM05D006332 ORTHO05D008421 4.1e-169 598.6 427 70.7
PGR004G2698 Punica granatum HOM05D006332 ORTHO05D008421 3.8e-167 592.0 438 68.5
Gohir.D06G130900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 8.5e-167 590.9 430 69.3
Thecc.06G190700 Theobroma cacao HOM05D006332 ORTHO05D008421 1.9e-166 589.7 430 69.3
Oeu053924.1 Olea europaea HOM05D006332 ORTHO05D008421 4.2e-166 588.6 436 69.7
Potri.004G040500 Populus trichocarpa HOM05D006332 ORTHO05D008421 7.2e-166 587.8 431 69.8
Hma1.2p1_0881F.1_g231970 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 2.7e-165 585.9 430 69.5
Solyc10g008990.4 Solanum lycopersicum HOM05D006332 ORTHO05D008421 3.6e-165 585.5 433 69.7
Gohir.A06G126100 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.6e-165 585.1 431 68.4
CiPaw.09G057500 Carya illinoinensis HOM05D006332 ORTHO05D008421 6.1e-165 584.7 430 69.5
Prupe.4G044000 Prunus persica HOM05D006332 ORTHO05D008421 6.1e-165 584.7 428 69.4
Duzib160G0593 Durio zibethinus HOM05D006332 ORTHO05D008421 7.9e-165 584.3 430 69.3
PSO063G3883 Papaver somniferum HOM05D006332 ORTHO05D008421 1.0e-164 583.9 430 68.8
Lj4g0020818 Lotus japonicus HOM05D006332 ORTHO05D008421 1.3e-164 583.6 420 69.3
Manes.16G025600 Manihot esculenta HOM05D006332 ORTHO05D008421 1.3e-164 583.6 432 69.7
Aqoxy1G02544 Aquilegia oxysepala HOM05D006332 ORTHO05D008421 3.0e-164 582.4 431 68.4
Duzib235G1125 Durio zibethinus HOM05D006332 ORTHO05D008421 3.0e-164 582.4 430 69.1
CANSAT35G2021 Cannabis sativa HOM05D006332 ORTHO05D008421 5.1e-164 581.6 429 68.8
HanXRQChr04g0124141 Helianthus annuus HOM05D006332 ORTHO05D008421 6.7e-164 581.3 426 69.5
MSTRG.13186 Avicennia marina HOM05D006332 ORTHO05D008421 1.5e-163 580.1 432 69.7
Gorai.010G152800 Gossypium raimondii HOM05D006332 ORTHO05D008421 1.5e-163 580.1 423 69.5
CSS0022240 Camellia sinensis var. sinensis HOM05D006332 ORTHO05D008421 1.9e-163 579.7 436 69.5
Glyma.13G181100 Glycine max HOM05D006332 ORTHO05D008421 1.9e-163 579.7 431 69.4
Medtr4g088960 Medicago truncatula HOM05D006332 ORTHO05D008421 4.3e-163 578.6 420 69.0
PGSC0003DMG400022831 Solanum tuberosum HOM05D006332 ORTHO05D008421 4.3e-163 578.6 436 68.3
arahy.Tifrunner.gnm1.ann1.I941VF Arachis hypogaea HOM05D006332 ORTHO05D008421 1.3e-162 577.0 428 68.5
Phvul.002G227700 Phaseolus vulgaris HOM05D006332 ORTHO05D008421 1.3e-162 577.0 423 68.3
MD10G1296600 Malus domestica HOM05D006332 ORTHO05D008421 1.6e-162 576.6 434 68.0
Psat7g112800 Pisum sativum HOM05D006332 ORTHO05D008421 1.6e-162 576.6 420 69.0
COL.COLO4_31500 Corchorus olitorius HOM05D006332 ORTHO05D008421 2.2e-162 576.2 451 66.7
PSO782G1256 Papaver somniferum HOM05D006332 ORTHO05D008421 2.2e-162 576.2 430 68.1
ClCG03G005920 Citrullus lanatus HOM05D006332 ORTHO05D008421 4.8e-162 575.1 432 68.1
arahy.Tifrunner.gnm1.ann1.5TP18E Arachis hypogaea HOM05D006332 ORTHO05D008421 6.3e-162 574.7 426 68.5
FAN16G1437 Fragaria x ananassa HOM05D006332 ORTHO05D008421 8.2e-162 574.3 427 68.9
Ca_18532_v3 Cicer arietinum L. HOM05D006332 ORTHO05D008421 4.1e-161 572.0 420 67.9
CsaV3_1G012160 Cucumis sativus L. HOM05D006332 ORTHO05D008421 5.3e-161 571.6 432 67.6
Sed0003237 Sechium edule HOM05D006332 ORTHO05D008421 5.3e-161 571.6 431 67.1
MELO3C002589.2 Cucumis melo HOM05D006332 ORTHO05D008421 6.9e-161 571.2 433 67.2
Gorai.011G026200 Gossypium raimondii HOM05D006332 ORTHO05D008421 9.1e-161 570.9 426 66.7
TPR.G12057 Trifolium pratense HOM05D006332 ORTHO05D008421 1.5e-160 570.1 423 68.1
FvH4_3g04870 Fragaria vesca HOM05D006332 ORTHO05D008421 2.6e-160 569.3 438 67.4
TWI38G1702 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 2.6e-160 569.3 434 67.5
Migut.H01511 Erythranthe guttata HOM05D006332 ORTHO05D008421 3.4e-160 568.9 432 69.2
Gohir.A10G024200 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.5e-160 568.5 426 66.4
THA.LOC104817534 Tarenaya hassleriana HOM05D006332 ORTHO05D008421 4.5e-160 568.5 428 68.5
Gohir.D10G024900 Gossypium hirsutum HOM05D006332 ORTHO05D008421 5.9e-160 568.2 426 66.4
Haze_06500 Corylus avellana HOM05D006332 ORTHO05D008421 7.7e-160 567.8 439 67.0
FAN21G2488 Fragaria x ananassa HOM05D003523 ORTHO05D004493 1.0e-159 567.4 429 68.1
Glyma.07G195200 Glycine max HOM05D006332 ORTHO05D008421 1.7e-159 566.6 422 69.4
Eucgr.D00641 Eucalyptus grandis HOM05D006332 ORTHO05D008421 2.2e-159 566.2 428 68.7
RcHm_v2.0_Chr5g0008031 Rosa chinensis HOM05D006332 ORTHO05D008421 2.2e-159 566.2 427 67.7
VMungo0251G1219 Vigna mungo HOM05D006332 ORTHO05D008421 5.0e-159 565.1 423 66.9
Lalb_Chr16g0383661 Lupinus albus HOM05D006332 ORTHO05D008421 8.5e-159 564.3 426 67.8
QL05p039635 Quercus lobata HOM05D006332 ORTHO05D008421 8.5e-159 564.3 438 66.0
FAN11G2101 Fragaria x ananassa HOM05D003523 ORTHO05D004493 2.5e-158 562.8 438 66.4
MD05G1316100 Malus domestica HOM05D006332 ORTHO05D008421 1.8e-156 556.6 437 65.4
ATR0680G340 Amborella trichopoda HOM05D006332 ORTHO05D008421 3.0e-156 555.8 429 67.4
ECA236G3091 Erigeron canadensis HOM05D006332 ORTHO05D008421 6.7e-156 554.7 434 66.6
HanXRQChr01g0003951 Helianthus annuus HOM05D006332 ORTHO05D008421 2.6e-155 552.7 423 65.5
TWI63G1670 Tripterygium wilfordii HOM05D006332 ORTHO05D008421 4.4e-155 552.0 454 63.2
AT2G47960 Arabidopsis thaliana HOM05D006332 ORTHO05D008421 1.3e-154 550.4 426 66.9
Sp4g29880 Schrenkiella parvula HOM05D006332 ORTHO05D008421 4.8e-154 548.5 426 65.0
AL4G47550 Arabidopsis lyrata HOM05D006332 ORTHO05D008421 8.2e-154 547.7 426 66.4
Nn6g34413 Nelumbo nucifera HOM05D006332 ORTHO05D008421 1.8e-153 546.6 430 63.5
Thhalv10018568m.g Eutrema salsugineum HOM05D006332 ORTHO05D008421 3.1e-153 545.8 427 66.0
Carub.0004s3069 Capsella rubella HOM05D006332 ORTHO05D008421 4.1e-153 545.4 427 65.8
Nitab4.5_0003942g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.6e-152 542.7 437 66.1
HPP92_001753 Vanilla planifolia HOM05D006332 ORTHO05D008421 3.4e-152 542.3 436 62.8
Peaxi162Scf00530g00823 Petunia axillaris HOM05D006332 ORTHO05D008421 1.3e-151 540.4 431 65.9
C04p00010 Brassica napus HOM05D004682 ORTHO05D006197 2.2e-151 539.7 425 64.9
BolC4t21648H Brassica oleracea HOM05D004682 ORTHO05D006197 2.2e-151 539.7 425 64.9
BcaC02g12534 Brassica carinata HOM05D006332 ORTHO05D008421 2.9e-151 539.3 424 65.1
A05p00090 Brassica napus HOM05D004682 ORTHO05D006197 6.5e-151 538.1 425 64.5
BraA05t19005Z Brassica rapa HOM05D004682 ORTHO05D006197 6.5e-151 538.1 425 64.5
CDE08G0172 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.1e-149 533.1 432 63.2
Sabra04G0025000 Salix brachista HOM05D006332 ORTHO05D008421 2.1e-149 533.1 490 60.0
Ciclev10015324m.g Citrus clementina HOM05D006332 ORTHO05D008421 2.7e-149 532.7 434 64.3
Hund21245 Selenicereus undatus HOM05D006332 ORTHO05D008421 1.0e-148 530.8 428 68.5
ECA248G3961 Erigeron canadensis HOM05D006332 ORTHO05D008421 1.1e-147 527.3 429 62.7
Zm00001eb044550 Zea mays HOM05D006332 ORTHO05D008421 7.4e-147 524.6 435 62.1
BcaB02g08727 Brassica carinata HOM05D006332 ORTHO05D008421 2.8e-146 522.7 429 62.7
Lsat_1_v5_gn_7_19001 Lactuca sativa HOM05D006332 ORTHO05D008421 2.2e-143 513.1 425 63.3
Nn1g04020 Nelumbo nucifera HOM05D006332 ORTHO05D008421 2.5e-142 509.6 362 70.2
MBI17_g03748_MAGBIO Magnolia biondii HOM05D006332 ORTHO05D008421 2.0e-139 500.0 423 62.2
CARHR143350 Cardamine hirsuta HOM05D006332 ORTHO05D008421 4.4e-139 498.8 376 67.8
Hma1.2p1_0126F.1_g059220 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 1.4e-137 493.8 447 59.3
SGA_v2.0_scaffold49G18281 Striga asiatica HOM05D006332 ORTHO05D008421 4.1e-137 492.3 453 59.4
Aa31LG1G29380 Aethionema arabicum HOM05D006332 ORTHO05D008421 7.7e-136 488.0 426 61.0
Cfa000416 Carpinus fangiana HOM05D006332 ORTHO05D008421 1.2e-133 480.7 365 66.6
Hma1.2p1_0881F.1_g231960 Hydrangea macrophylla HOM05D006332 ORTHO05D008421 3.6e-133 479.2 344 71.8
Sc24g0000810 Simmondsia chinensis HOM05D006332 ORTHO05D008421 8.8e-132 474.6 601 48.1
DCAR_004087 Daucus carota HOM05D006332 ORTHO05D008421 1.2e-131 474.2 347 71.5
Lsat_1_v5_gn_1_127821 Lactuca sativa HOM05D006332 ORTHO05D008421 1.8e-129 466.8 427 58.3
unitig_8.g3355 Utricularia gibba HOM05D006332 ORTHO05D008421 4.2e-126 455.7 448 57.1
Duzib192G0908 Durio zibethinus HOM05D006332 ORTHO05D008421 9.8e-123 444.5 363 63.9
Nitab4.5_0009738g0010 Nicotiana tabacum HOM05D006332 ORTHO05D008421 2.7e-120 436.4 355 64.5
SMO364G0571 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 4.7e-117 425.6 422 52.1
Mapoly0122s0006 Marchantia polymorpha HOM05D006332 ORTHO05D008421 8.0e-117 424.9 419 50.6
Pp3c1_28670 Physcomitrium patens HOM05D006332 ORTHO05D008421 1.0e-116 424.5 419 52.7
AagrBONN_evm.TU.Sc2ySwM_344.1820 Anthoceros agrestis HOM05D006332 ORTHO05D008421 3.0e-116 422.9 417 50.6
CAN.G413.15 Capsicum annuum HOM05D006332 ORTHO05D008421 2.2e-114 416.8 329 65.3
Atru.chr10.1934 Acer truncatum HOM05D006332 ORTHO05D008421 7.0e-113 411.8 287 73.2
SMO364G0067 Selaginella moellendorffii HOM05D006332 ORTHO05D008421 1.0e-87 328.2 314 52.2
CBR_g24248 Chara braunii HOM05D006332 ORTHO05D008421 3.0e-87 326.6 439 41.0
Gohir.A10G024325 Gossypium hirsutum HOM05D006332 ORTHO05D008421 4.8e-77 292.7 200 73.5
SHI01800 Sapria himalayana HOM05D006332 ORTHO05D008421 9.3e-73 278.5 280 56.8
Nitab4.5_0009738g0020 Nicotiana tabacum HOM05D006332 ORTHO05D008421 4.0e-68 263.1 335 46.6
Sopen10g004770 Solanum pennellii HOM05D006332 ORTHO05D008421 5.3e-68 262.7 210 64.3
Gohir.A10G024350 Gossypium hirsutum HOM05D006332 ORTHO05D008421 3.1e-44 183.7 155 58.7
PRCOL_00003805 Prasinoderma coloniale HOM05D006332 ORTHO05D008421 1.3e-42 178.3 406 33.3
SHI01798 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-35 155.2 205 45.4
Ciclev10009862m.g Citrus clementina HOM05D006332 ORTHO05D008421 1.3e-29 135.2 103 67.0
Atru.chr10.1933 Acer truncatum HOM05D006332 ORTHO05D008421 1.3e-26 125.2 111 54.1
TPR.G24681 Trifolium pratense HOM05D006332 ORTHO05D001923 8.5e-18 95.9 62 67.7
PSO017G7020 Papaver somniferum HOM05D006332 ORTHO05D000676 7.2e-17 92.8 106 44.3
PSO170G5489 Papaver somniferum HOM05D006332 ORTHO05D008421 2.1e-16 91.3 91 49.5
Nitab4.5_0009738g0030 Nicotiana tabacum HOM05D006332 ORTHO05D008421 3.7e-13 80.5 91 53.8
CDE02G4141 Ceratophyllum demersum HOM05D006332 ORTHO05D008421 2.1e-08 64.7 48 60.4
Os10g0498800 Oryza sativa ssp. japonica HOM05D006332 ORTHO05D008421 2.8e-08 64.3 56 55.4
Cpa.g.sc777.3 Carica papaya HOM05D006332 ORTHO05D034078 5.7e-06 56.6 36 77.8


User provided reference genes

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