Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 4.5e-258 894.0 439 100.0
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 2.4e-219 765.4 375 99.7
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 5.6e-216 754.2 376 97.9
EL10Ac8g20299 Beta vulgaris HOM05D008347 ORTHO05D006373 7.6e-189 664.1 319 100.0
AUR62037050 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.9e-158 561.2 383 72.8
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 9.0e-158 560.8 279 99.3
EL10Ac1g01483 Beta vulgaris HOM05D008347 ORTHO05D006373 7.1e-155 551.2 375 76.3
AUR62039428 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.1e-126 455.7 365 63.0
AUR62040645 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.3e-126 455.3 366 62.8
EL10Ac8g20300 Beta vulgaris HOM05D008347 ORTHO05D006373 1.2e-120 437.6 327 75.5
AUR62034037 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.8e-110 403.7 306 67.0
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.3e-108 396.7 366 56.8
AUR62028334 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.0e-105 387.9 365 56.2
AUR62006881 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.7e-100 370.5 330 55.5
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.3e-92 344.4 368 48.1
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.0e-92 343.2 342 49.7
AUR62010222 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.5e-88 328.6 365 50.1
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 2.9e-87 326.6 282 53.2
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.1e-86 322.8 322 49.1
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 1.8e-81 307.4 286 51.4
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.0e-80 303.9 350 46.3
EL10Ac1g01468 Beta vulgaris HOM05D008347 ORTHO05D006373 6.6e-76 288.9 275 49.8
AUR62040955 Chenopodium quinoa HOM05D008347 ORTHO05D006373 6.6e-76 288.9 265 52.8
EL10Ac5g11801 Beta vulgaris HOM05D008347 ORTHO05D006373 3.6e-74 283.1 355 42.5
EL10Ac3g07052 Beta vulgaris HOM05D008347 ORTHO05D006373 5.2e-73 279.3 275 49.5
AUR62008764 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.2e-71 273.9 201 64.2
EL10Ac8g19218 Beta vulgaris HOM05D008347 ORTHO05D006373 3.8e-71 273.1 307 45.3
AUR62026149 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.4e-63 245.4 192 65.6
AUR62043228 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.3e-60 237.3 190 64.7
AUR62021930 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.1e-57 228.4 277 42.2
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.3e-52 210.7 128 73.4
AUR62040460 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.8e-50 203.0 134 74.6
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 1.0e-47 195.3 336 33.6
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 5.5e-46 189.5 326 32.5
AUR62024102 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.1e-45 187.6 295 35.6
AUR62035164 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.1e-44 183.0 295 34.6
EL10Ac1g01891 Beta vulgaris HOM05D008347 ORTHO05D006373 6.2e-42 176.0 295 33.9
Ca_06761_v3 Cicer arietinum L. HOM05D008347 ORTHO05D006373 5.0e-39 166.4 334 31.1
VMungo1383G0244 Vigna mungo HOM05D008347 ORTHO05D006373 4.6e-37 159.8 292 32.9
AUR62026561 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.2e-30 136.0 178 46.1
EL10Ac4g09233 Beta vulgaris HOM05D012416 ORTHO05D006373 2.5e-27 127.5 278 28.8
Hund11135 Selenicereus undatus HOM05D014069 ORTHO05D000105 3.3e-27 127.1 290 31.4
AUR62026562 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.1e-25 119.0 134 44.0
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.1e-25 119.0 248 31.9
VMungo1127G2249 Vigna mungo HOM05D008347 ORTHO05D006373 1.0e-23 115.5 251 31.5
AUR62028259 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.2e-23 114.4 75 69.3
EL10Ac3g07114 Beta vulgaris HOM05D009952 ORTHO05D011763 2.9e-23 114.0 307 28.0
EL10Ac3g05933 Beta vulgaris HOM05D009952 ORTHO05D011763 3.8e-23 113.6 307 28.0
TPR.G14519 Trifolium pratense HOM05D014681 ORTHO05D006373 6.5e-23 112.8 354 25.1
VMungo0331G0159 Vigna mungo HOM05D008347 ORTHO05D006373 1.4e-22 111.7 280 29.3
Hund25675 Selenicereus undatus HOM05D014069 ORTHO05D017114 1.9e-22 111.3 352 27.0
EL10Ac1g01624 Beta vulgaris HOM05D008347 ORTHO05D006373 9.4e-22 109.0 236 30.9
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.1e-21 106.3 256 29.3
AUR62043954 Chenopodium quinoa HOM05D005385 ORTHO05D006768 1.4e-20 105.1 263 28.9
EL10Ac5g11398 Beta vulgaris HOM05D009952 ORTHO05D011763 1.1e-19 102.1 302 26.8
EL10Ac5g10852 Beta vulgaris HOM05D009952 ORTHO05D011763 1.5e-19 101.7 296 26.0
AUR62025216 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.6e-19 100.9 256 28.9
AUR62034621 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.6e-19 100.9 256 28.9
AUR62042040 Chenopodium quinoa HOM05D012416 ORTHO05D000016 2.6e-19 100.9 256 28.9
AUR62044466 Chenopodium quinoa HOM05D012416 ORTHO05D006373 2.6e-19 100.9 256 28.9
AUR62044448 Chenopodium quinoa HOM05D005322 ORTHO05D011763 4.4e-19 100.1 300 27.3
AUR62038304 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.7e-19 99.8 223 31.4
Ah.10g025060 Amaranthus hybridus HOM05D020495 ORTHO05D017251 7.4e-19 99.4 231 27.7
TPR.G29272 Trifolium pratense HOM05D020749 ORTHO05D006373 1.7e-18 98.2 260 25.0
TPR.G36100 Trifolium pratense HOM05D014681 ORTHO05D006373 3.7e-18 97.1 234 24.4
EL10Ac4g08685 Beta vulgaris HOM05D015602 ORTHO05D006373 4.8e-18 96.7 278 27.3
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.1e-17 95.5 224 29.0
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 1.1e-17 95.5 224 29.0
THA.LOC104819104 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 1.1e-17 95.5 333 28.5
AUR62028249 Chenopodium quinoa HOM05D012416 ORTHO05D000016 1.4e-17 95.1 306 27.1
AUR62034995 Chenopodium quinoa HOM05D000107 ORTHO05D011763 2.4e-17 94.4 310 25.5
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 3.1e-17 94.0 278 26.6
EL10As4g23418 Beta vulgaris HOM05D015602 ORTHO05D006373 3.1e-17 94.0 278 26.6
BcaB04g17676 Brassica carinata HOM05D009356 ORTHO05D010353 5.3e-17 93.2 238 29.0
Hund21319 Selenicereus undatus HOM05D014069 ORTHO05D017114 2.9e-15 87.4 239 28.9
AUR62044346 Chenopodium quinoa HOM05D012416 ORTHO05D006373 6.5e-15 86.3 172 30.2
BcaB08g35272 Brassica carinata HOM05D009356 ORTHO05D010353 1.1e-14 85.5 218 28.9
Hund02849 Selenicereus undatus HOM05D007290 ORTHO05D017114 1.1e-14 85.5 147 36.7
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 2.5e-14 84.3 222 27.9
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 3.2e-14 84.0 222 27.9
EL10Ac3g06674 Beta vulgaris HOM05D009474 ORTHO05D006373 3.2e-14 84.0 244 29.1
EL10Ac4g08425 Beta vulgaris HOM05D009474 ORTHO05D006373 5.5e-14 83.2 244 28.7
THA.LOC104825741 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 5.5e-14 83.2 354 23.7
HanXRQChr05g0135901 Helianthus annuus HOM05D018814 ORTHO05D020816 7.2e-14 82.8 275 28.4
Ah.15g098220 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.6e-13 81.6 289 26.3
BcaC03g14879 Brassica carinata HOM05D009356 ORTHO05D010353 1.6e-13 81.6 287 27.2
Ah.11g039660 Amaranthus hybridus HOM05D009952 ORTHO05D011763 2.1e-13 81.3 264 26.1
TPR.G14054 Trifolium pratense HOM05D014681 ORTHO05D006373 2.1e-13 81.3 268 25.0
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 2.7e-13 80.9 294 27.2
Ah.13g068710 Amaranthus hybridus HOM05D009952 ORTHO05D011763 4.7e-13 80.1 265 26.4
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 6.1e-13 79.7 244 27.0
EL10Ac3g06648 Beta vulgaris HOM05D009474 ORTHO05D006373 8.0e-13 79.3 210 30.0
EL10Ac5g11109 Beta vulgaris HOM05D009474 ORTHO05D006373 8.0e-13 79.3 244 27.9
EL10Ac2g03104 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-12 79.0 246 28.5
EL10Ac4g08745 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-12 79.0 244 27.9
AUR62012996 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.0e-12 79.0 198 27.3
EL10Ac1g01682 Beta vulgaris HOM05D009474 ORTHO05D006373 1.4e-12 78.6 244 27.9
EL10Ac8g19408 Beta vulgaris HOM05D009474 ORTHO05D006373 1.4e-12 78.6 244 27.0
EL10Ac2g03310 Beta vulgaris HOM05D009474 ORTHO05D006373 1.8e-12 78.2 246 28.0
EL10Ac9g20913 Beta vulgaris HOM05D009474 ORTHO05D006373 1.8e-12 78.2 244 27.9
EL10As24g24232 Beta vulgaris HOM05D009474 ORTHO05D006373 1.8e-12 78.2 244 27.9
EL10Ac6g14023 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-12 77.8 244 27.9
EL10Ac6g14024 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-12 77.8 244 27.9
EL10Ac7g16650 Beta vulgaris HOM05D009474 ORTHO05D006373 2.3e-12 77.8 244 28.3
EL10Ac5g12647 Beta vulgaris HOM05D009474 ORTHO05D006373 4.0e-12 77.0 239 28.5
EL10Ac2g03375 Beta vulgaris HOM05D015602 ORTHO05D006373 6.7e-12 76.3 235 27.7
EL10Ac9g20896 Beta vulgaris HOM05D009474 ORTHO05D006373 6.7e-12 76.3 210 29.5
AL3G44170 Arabidopsis lyrata HOM05D024197 ORTHO05D006373 1.1e-11 75.5 278 24.5
AUR62042837 Chenopodium quinoa HOM05D005322 ORTHO05D011763 1.5e-11 75.1 289 23.9
Ah.15g097870 Amaranthus hybridus HOM05D033670 ORTHO05D030990 2.6e-11 74.3 121 32.2
Ah.15g097930 Amaranthus hybridus HOM05D033670 ORTHO05D030990 2.6e-11 74.3 121 32.2
Ah.15g098330 Amaranthus hybridus HOM05D033670 ORTHO05D030990 2.6e-11 74.3 121 32.2
EL10Ac8g19716 Beta vulgaris HOM05D009474 ORTHO05D006373 2.6e-11 74.3 244 27.5
Ah.07g198370 Amaranthus hybridus HOM05D009559 ORTHO05D006373 5.7e-11 73.2 234 25.2
EL10Ac5g11532 Beta vulgaris HOM05D009474 ORTHO05D006373 5.7e-11 73.2 179 29.1
SGA_v2.0_scaffold47G17589 Striga asiatica HOM05D008515 ORTHO05D009562 5.7e-11 73.2 211 27.0
THA.LOC104820475 Tarenaya hassleriana HOM05D008347 ORTHO05D006373 7.5e-11 72.8 302 22.2
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 1.3e-10 72.0 223 26.0
BcaC05g27052 Brassica carinata HOM05D009356 ORTHO05D010353 1.3e-10 72.0 159 27.0
Aa31LG4G12890 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.8e-10 70.9 280 22.5
Aa31sc154G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.8e-10 70.9 280 22.5
Aa31sc482G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.8e-10 70.9 280 22.5
Medtr4g036480 Medicago truncatula HOM05D002808 ORTHO05D003135 3.7e-10 70.5 248 26.2
EL10Ac4g08488 Beta vulgaris HOM05D009474 ORTHO05D006373 4.8e-10 70.1 189 27.0
EL10Ac4g08475 Beta vulgaris HOM05D009474 ORTHO05D006373 6.3e-10 69.7 247 26.7
BcaC05g28711 Brassica carinata HOM05D009356 ORTHO05D010353 6.3e-10 69.7 168 30.4
SGA_v2.0_scaffold458G51936 Striga asiatica HOM05D008515 ORTHO05D009562 6.3e-10 69.7 316 24.1
Ah.01g012380 Amaranthus hybridus HOM05D009474 ORTHO05D006373 8.2e-10 69.3 256 26.6
TPR.G20500 Trifolium pratense HOM05D014681 ORTHO05D006373 8.2e-10 69.3 115 32.2
Ah.12g065270 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.1e-09 68.9 254 24.4
Aa31LG10G9000 Aethionema arabicum HOM05D007652 ORTHO05D002482 1.8e-09 68.2 164 25.0
Aa31LG6G10130 Aethionema arabicum HOM05D007652 ORTHO05D002482 1.8e-09 68.2 286 22.7
Ah.03g142790 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.8e-09 68.2 196 26.5
AUR62038402 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.3e-09 66.6 141 29.1
Hund24804 Selenicereus undatus HOM05D008347 ORTHO05D010196 1.6e-08 65.1 128 33.6
Lsat_1_v5_gn_6_61681 Lactuca sativa HOM05D025918 ORTHO05D029968 2.0e-08 64.7 191 25.7
SpUn0005_0080 Schrenkiella parvula HOM05D007883 ORTHO05D010332 2.7e-08 64.3 233 24.5
SGA_v2.0_scaffold18G08387 Striga asiatica HOM05D008515 ORTHO05D009562 1.3e-07 62.0 199 23.1
SGA_v2.0_scaffold41G15793 Striga asiatica HOM05D008553 ORTHO05D009562 2.2e-07 61.2 121 27.3
SGA_v2.0_scaffold448G51780 Striga asiatica HOM05D008515 ORTHO05D009562 2.9e-07 60.8 199 23.1
SGA_v2.0_scaffold235G43682 Striga asiatica HOM05D008515 ORTHO05D009562 8.5e-07 59.3 188 23.4
Ah.01g009990 Amaranthus hybridus HOM05D009559 ORTHO05D006373 1.9e-06 58.2 133 25.6
EL10Ac6g14112 Beta vulgaris HOM05D009474 ORTHO05D006373 3.2e-06 57.4 160 26.2
HanXRQChr04g0109951 Helianthus annuus HOM05D010611 ORTHO05D011573 3.2e-06 57.4 168 26.2
Sp7g10380 Schrenkiella parvula HOM05D009356 ORTHO05D011005 3.2e-06 57.4 134 28.4
EL10Ac5g11120 Beta vulgaris HOM05D015602 ORTHO05D006373 4.2e-06 57.0 149 29.5
SGA_v2.0_scaffold2G00816 Striga asiatica HOM05D022151 ORTHO05D026195 5.5e-06 56.6 209 26.8
SGA_v2.0_scaffold21G09321 Striga asiatica HOM05D008515 ORTHO05D009562 9.4e-06 55.8 138 24.6


User provided reference genes

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