Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 2.9e-143 511.9 263 100.0
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.4e-49 200.7 189 58.7
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.6e-37 160.6 194 49.5
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 3.1e-36 156.4 176 53.4
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 2.0e-35 153.7 197 50.3
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 9.9e-35 151.4 101 75.2
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 9.9e-35 151.4 189 48.7
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 1.3e-34 151.0 190 50.5
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 1.7e-34 150.6 101 74.3
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 2.2e-34 150.2 100 75.0
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 2.2e-34 150.2 111 67.6
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 4.9e-34 149.1 110 66.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 4.9e-34 149.1 101 71.3
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 4.9e-34 149.1 105 69.5
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 4.9e-34 149.1 101 72.3
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.9e-34 149.1 111 66.7
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 4.9e-34 149.1 111 65.8
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 8.4e-34 148.3 153 54.9
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 8.4e-34 148.3 127 57.5
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.1e-33 147.9 107 72.0
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.4e-33 147.5 154 54.5
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 1.9e-33 147.1 112 66.1
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 2.4e-33 146.7 112 66.1
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 3.2e-33 146.4 153 54.2
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 3.2e-33 146.4 114 65.8
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 5.4e-33 145.6 100 72.0
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 5.4e-33 145.6 100 72.0
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 5.4e-33 145.6 100 72.0
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 5.4e-33 145.6 102 67.6
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 1.2e-32 144.4 164 47.0
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 1.2e-32 144.4 101 71.3
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 2.7e-32 143.3 112 67.0
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 2.7e-32 143.3 158 48.7
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.7e-32 143.3 101 70.3
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 3.5e-32 142.9 104 68.3
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 4.6e-32 142.5 153 52.3
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 6.0e-32 142.1 146 50.0
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 7.8e-32 141.7 101 69.3
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 1.0e-31 141.4 187 43.9
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 1.7e-31 140.6 185 44.3
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 2.3e-31 140.2 185 44.3
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 2.3e-31 140.2 102 67.6
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 2.3e-31 140.2 109 64.2
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 2.3e-31 140.2 185 45.4
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 3.0e-31 139.8 107 64.5
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 3.0e-31 139.8 185 44.3
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 3.0e-31 139.8 179 46.4
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 3.9e-31 139.4 101 67.3
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 5.1e-31 139.0 105 67.6
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 5.1e-31 139.0 93 76.3
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 5.1e-31 139.0 101 68.3
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 5.1e-31 139.0 168 48.2
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 6.6e-31 138.7 104 68.3
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.6e-31 138.7 106 66.0
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 6.6e-31 138.7 106 66.0
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 6.6e-31 138.7 124 57.3
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 8.7e-31 138.3 101 66.3
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 8.7e-31 138.3 101 66.3
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 8.7e-31 138.3 105 66.7
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 8.7e-31 138.3 101 67.3
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 8.7e-31 138.3 101 71.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 1.1e-30 137.9 104 65.4
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.1e-30 137.9 101 68.3
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 1.5e-30 137.5 98 67.3
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.5e-30 137.5 101 68.3
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 2.5e-30 136.7 101 65.3
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 2.5e-30 136.7 101 67.3
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 5.6e-30 135.6 90 71.1
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 7.3e-30 135.2 101 63.4
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 9.6e-30 134.8 100 67.0
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 1.2e-29 134.4 114 57.9
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.6e-29 134.0 101 64.4
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.6e-29 134.0 105 61.0
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 3.6e-29 132.9 181 43.1
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 4.7e-29 132.5 176 42.6
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 6.2e-29 132.1 200 43.0
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 8.1e-29 131.7 135 52.6
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 1.1e-28 131.3 108 63.9
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.4e-28 131.0 94 67.0
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 3.1e-28 129.8 106 59.4
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 3.1e-28 129.8 105 58.1
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.2e-28 129.0 101 65.3
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 5.2e-28 129.0 101 65.3
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 2.0e-27 127.1 99 61.6
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 2.0e-27 127.1 91 65.9
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 3.4e-27 126.3 92 69.6
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 9.9e-27 124.8 141 52.5
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 7.1e-25 118.6 117 47.9
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 2.7e-24 116.7 100 59.0
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 6.0e-24 115.5 97 61.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 7.8e-24 115.2 72 77.8
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.0e-23 114.8 92 64.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 3.0e-23 113.2 85 68.2
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 3.0e-23 113.2 123 48.8
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 1.3e-21 107.8 76 71.1
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.8e-20 104.0 125 52.8
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 5.3e-20 102.4 88 60.2
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 3.4e-19 99.8 103 55.3
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 6.4e-18 95.5 73 61.6
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 6.4e-18 95.5 109 41.3
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 3.2e-17 93.2 81 46.9
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 6.0e-16 89.0 60 70.0
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-13 80.1 81 46.9
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 3.8e-10 69.7 53 66.0
AUR62012832 Chenopodium quinoa HOM05D007365 ORTHO05D009309 1.0e-07 61.6 66 50.0
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.8e-07 60.8 40 70.0
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 6.7e-07 58.9 46 65.2


User provided reference genes

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