Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20211 Beta vulgaris HOM05D004898 ORTHO05D005574 0.0e+00 1087.8 549 100.0
AUR62012806 Chenopodium quinoa HOM05D004898 ORTHO05D005574 5.1e-267 924.1 531 85.9
Hund23404 Selenicereus undatus HOM05D004898 ORTHO05D005574 1.8e-235 819.3 532 77.8
Dinv07411 Davidia involucrata HOM05D004898 ORTHO05D005574 7.4e-234 813.9 528 77.3
MD05G1358600 Malus domestica HOM05D004898 ORTHO05D005574 1.6e-233 812.8 519 78.0
FvH4_3g00891 Fragaria vesca HOM05D004898 ORTHO05D005574 6.3e-233 810.8 530 76.2
FAN21G2703 Fragaria x ananassa HOM05D004898 ORTHO05D005574 1.8e-232 809.3 530 76.0
Oeu052872.1 Olea europaea HOM05D004898 ORTHO05D005574 1.2e-231 806.6 524 78.2
TWI38G1092 Tripterygium wilfordii HOM05D004898 ORTHO05D005574 3.4e-231 805.1 528 76.7
Prupe.4G009500 Prunus persica HOM05D004898 ORTHO05D005574 3.8e-230 801.6 525 76.8
Potri.006G013900 Populus trichocarpa HOM05D004898 ORTHO05D005574 6.5e-230 800.8 519 77.8
Rhsim13G0144800 Rhododendron simsii HOM05D004898 ORTHO05D005574 8.5e-230 800.4 523 75.3
Sabra06G0009800 Salix brachista HOM05D004898 ORTHO05D005574 1.9e-229 799.3 526 75.7
Eucgr.E03924 Eucalyptus grandis HOM05D004898 ORTHO05D005574 3.6e-228 795.0 523 76.9
Sc05g0009650 Simmondsia chinensis HOM05D004898 ORTHO05D005574 1.0e-227 793.5 530 76.2
Atru.chr1.2413_Atru.chr1.2414 Acer truncatum HOM05D004898 ORTHO05D005574 1.4e-227 793.1 526 75.7
RcHm_v2.0_Chr5g0001371 Rosa chinensis HOM05D004898 ORTHO05D005574 1.4e-227 793.1 530 74.5
Manes.08G069675 Manihot esculenta HOM05D004898 ORTHO05D005574 5.1e-227 791.2 530 74.7
BcaC03g16972 Brassica carinata HOM05D004898 ORTHO05D005574 2.5e-226 788.9 530 74.5
C02p48760 Brassica napus HOM05D004898 ORTHO05D005574 2.5e-226 788.9 530 74.5
BolC2t10970H Brassica oleracea HOM05D004898 ORTHO05D005574 2.5e-226 788.9 530 74.5
Ciclev10014770m.g Citrus clementina HOM05D004898 ORTHO05D005574 3.3e-226 788.5 533 73.9
A02p31430 Brassica napus HOM05D004898 ORTHO05D005574 4.3e-226 788.1 530 74.5
AL8G10410 Arabidopsis lyrata HOM05D004898 ORTHO05D005574 6.3e-225 784.3 524 75.0
CANSAT56G0760 Cannabis sativa HOM05D004898 ORTHO05D005574 1.4e-224 783.1 533 72.6
Carub.0008s0022 Capsella rubella HOM05D004898 ORTHO05D005574 1.4e-224 783.1 525 74.7
Thhalv10000848m.g Eutrema salsugineum HOM05D004898 ORTHO05D005574 3.1e-224 781.9 526 74.5
CARHR173790 Cardamine hirsuta HOM05D004898 ORTHO05D005574 4.1e-224 781.6 523 75.3
A09p23110 Brassica napus HOM05D004898 ORTHO05D005574 1.2e-223 780.0 531 74.2
Sp2g12290 Schrenkiella parvula HOM05D004898 ORTHO05D005574 2.0e-223 779.2 523 74.8
BcaC06g31373 Brassica carinata HOM05D004898 ORTHO05D005574 7.7e-223 777.3 525 73.7
ECA240G2526 Erigeron canadensis HOM05D004898 ORTHO05D005574 7.7e-223 777.3 492 78.7
AT5G47560 Arabidopsis thaliana HOM05D004898 ORTHO05D005574 1.0e-222 776.9 524 75.0
BraA02t08145Z Brassica rapa HOM05D004898 ORTHO05D005574 1.0e-222 776.9 528 73.9
BcaC04g21615 Brassica carinata HOM05D004898 ORTHO05D005574 1.7e-222 776.2 532 73.9
BolC9t55848H Brassica oleracea HOM05D004898 ORTHO05D005574 1.7e-222 776.2 532 73.9
BraA09t37914Z Brassica rapa HOM05D004898 ORTHO05D005574 1.7e-222 776.2 531 73.8
Actinidia39792 Actinidia chinensis HOM05D004898 ORTHO05D005574 2.2e-222 775.8 523 73.0
THA.LOC104806731 Tarenaya hassleriana HOM05D004898 ORTHO05D005574 2.9e-222 775.4 520 75.4
C09p29850 Brassica napus HOM05D004898 ORTHO05D005574 8.5e-222 773.9 532 73.7
BolC7t43662H Brassica oleracea HOM05D004898 ORTHO05D005574 8.5e-222 773.9 525 73.3
Nn1g03284 Nelumbo nucifera HOM05D004898 ORTHO05D005574 1.4e-221 773.1 532 73.9
A06p44970 Brassica napus HOM05D004898 ORTHO05D005574 1.9e-221 772.7 525 73.3
C07p31210 Brassica napus HOM05D004898 ORTHO05D005574 1.9e-221 772.7 529 72.8
CAN.G1186.45 Capsicum annuum HOM05D004898 ORTHO05D005574 1.9e-221 772.7 531 72.5
SGA_v2.0_scaffold7G03752 Striga asiatica HOM05D004898 ORTHO05D005574 3.6e-220 768.5 518 74.5
Peaxi162Scf00352g00047 Petunia axillaris HOM05D004898 ORTHO05D005574 6.1e-220 767.7 508 75.0
QL05p069311 Quercus lobata HOM05D004898 ORTHO05D005574 3.9e-219 765.0 533 72.4
BraA06t27368Z Brassica rapa HOM05D004898 ORTHO05D005574 8.8e-219 763.8 519 73.4
Cc09_g00800 Coffea canephora HOM05D004898 ORTHO05D005574 1.1e-218 763.5 465 80.6
Lj1A1241T64 Lonicera japonica HOM05D004898 ORTHO05D005574 2.0e-218 762.7 523 74.2
GSVIVG01003326001 Vitis vinifera HOM05D004898 ORTHO05D005574 2.0e-218 762.7 461 81.3
Aa31LG9G5480 Aethionema arabicum HOM05D004898 ORTHO05D005574 2.6e-218 762.3 517 74.5
Cfa000089 Carpinus fangiana HOM05D004898 ORTHO05D005574 2.2e-217 759.2 523 71.3
MBI19_g06154_MAGBIO Magnolia biondii HOM05D004898 ORTHO05D005574 2.2e-217 759.2 537 70.6
Solyc11g012360.2 Solanum lycopersicum HOM05D004898 ORTHO05D005574 3.7e-217 758.4 541 71.2
Thecc.06G234600 Theobroma cacao HOM05D004898 ORTHO05D005574 3.7e-217 758.4 521 73.7
Lsat_1_v5_gn_7_13740 Lactuca sativa HOM05D004898 ORTHO05D005574 4.8e-217 758.1 512 75.0
RcHm_v2.0_Chr5g0001361 Rosa chinensis HOM05D004898 ORTHO05D005574 1.4e-216 756.5 532 70.9
BcaC06g34240 Brassica carinata HOM05D004898 ORTHO05D005574 4.1e-216 755.0 513 73.1
Prupe.4G009400 Prunus persica HOM05D004898 ORTHO05D005574 7.0e-216 754.2 521 72.4
Cfa000090 Carpinus fangiana HOM05D004898 ORTHO05D005574 2.0e-215 752.7 514 73.2
CiPaw.09G103400 Carya illinoinensis HOM05D004898 ORTHO05D005574 2.6e-215 752.3 523 70.9
FvH4_3g00890 Fragaria vesca HOM05D004898 ORTHO05D005574 2.9e-214 748.8 536 70.5
MD10G1333000 Malus domestica HOM05D004898 ORTHO05D005574 2.5e-213 745.7 522 71.1
PSO541G1832 Papaver somniferum HOM05D004898 ORTHO05D005574 4.2e-213 745.0 533 70.9
FAN21G0575 Fragaria x ananassa HOM05D004898 ORTHO05D005574 7.2e-213 744.2 536 70.1
CSS0045138 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 1.2e-212 743.4 525 70.7
Duzib160G0749 Durio zibethinus HOM05D004898 ORTHO05D005574 1.6e-212 743.0 530 71.1
Gohir.D06G160500 Gossypium hirsutum HOM05D004898 ORTHO05D005574 2.3e-211 739.2 517 70.8
FAN25G1838 Fragaria x ananassa HOM05D004898 ORTHO05D005574 5.2e-211 738.0 520 72.7
Gohir.A06G153700 Gossypium hirsutum HOM05D004898 ORTHO05D005574 4.4e-210 734.9 517 70.4
HanXRQChr05g0129101 Helianthus annuus HOM05D004898 ORTHO05D005574 5.7e-210 734.6 527 70.6
Haze_06951 Corylus avellana HOM05D004898 ORTHO05D005574 1.3e-209 733.4 516 71.3
CsaV3_1G017190 Cucumis sativus L. HOM05D004898 ORTHO05D005574 1.1e-208 730.3 532 69.5
Sed0020280 Sechium edule HOM05D004898 ORTHO05D005574 1.4e-208 729.9 532 69.7
ClCG01G010280 Citrullus lanatus HOM05D004898 ORTHO05D005574 1.8e-208 729.6 531 69.9
Gorai.010G187200 Gossypium raimondii HOM05D004898 ORTHO05D005574 1.8e-208 729.6 515 70.3
PSO675G0622 Papaver somniferum HOM05D004898 ORTHO05D005574 2.4e-208 729.2 504 72.8
PGSC0003DMG400013282 Solanum tuberosum HOM05D004898 ORTHO05D005574 3.1e-208 728.8 478 75.7
Sopen11g007110 Solanum pennellii HOM05D004898 ORTHO05D005574 5.3e-208 728.0 478 75.1
MELO3C025563.2 Cucumis melo HOM05D004898 ORTHO05D005574 5.9e-207 724.5 532 68.8
HPP92_022800 Vanilla planifolia HOM05D004898 ORTHO05D005574 5.9e-207 724.5 519 68.6
PGR042G1052 Punica granatum HOM05D004898 ORTHO05D005574 1.0e-206 723.8 518 71.0
DCAR_030865 Daucus carota HOM05D004898 ORTHO05D005574 2.2e-206 722.6 518 70.1
Gohir.D10G008600 Gossypium hirsutum HOM05D004898 ORTHO05D005574 5.0e-206 721.5 526 69.0
Nitab4.5_0000143g0160 Nicotiana tabacum HOM05D004898 ORTHO05D005574 1.2e-204 716.8 502 71.3
GSVIVG01006080001 Vitis vinifera HOM05D004898 ORTHO05D005574 2.1e-204 716.1 434 81.8
Gohir.A10G008900 Gossypium hirsutum HOM05D004898 ORTHO05D005574 2.7e-204 715.7 529 68.6
Glyma.09G010700 Glycine max HOM05D004898 ORTHO05D005574 2.7e-199 699.1 529 66.0
Glyma.15G115200 Glycine max HOM05D004898 ORTHO05D005574 1.0e-198 697.2 531 65.5
arahy.Tifrunner.gnm1.ann1.L2E3EJ Arachis hypogaea HOM05D004898 ORTHO05D005574 2.2e-198 696.0 544 65.6
arahy.Tifrunner.gnm1.ann1.5M9JPT Arachis hypogaea HOM05D004898 ORTHO05D005574 1.1e-197 693.7 520 67.7
Medtr4g133230 Medicago truncatula HOM05D004898 ORTHO05D005574 1.1e-197 693.7 531 65.0
Gorai.011G009400 Gossypium raimondii HOM05D004898 ORTHO05D005574 4.2e-197 691.8 526 67.5
VMungo0540G1349 Vigna mungo HOM05D004898 ORTHO05D005574 4.2e-197 691.8 531 65.5
Lj4g0027564 Lotus japonicus HOM05D004898 ORTHO05D005574 1.6e-196 689.9 536 64.4
arahy.Tifrunner.gnm1.ann1.GM6TB3 Arachis hypogaea HOM05D004898 ORTHO05D005574 3.6e-196 688.7 524 66.0
arahy.Tifrunner.gnm1.ann1.ZF0ICG Arachis hypogaea HOM05D004898 ORTHO05D005574 1.0e-195 687.2 524 65.8
Psat4g004680 Pisum sativum HOM05D004898 ORTHO05D005574 4.0e-195 685.3 542 63.8
Lj6g0016962 Lotus japonicus HOM05D004898 ORTHO05D005574 7.5e-194 681.0 525 65.0
COL.COLO4_31899 Corchorus olitorius HOM05D004898 ORTHO05D005574 1.3e-193 680.2 545 65.0
Psat1g175640 Pisum sativum HOM05D004898 ORTHO05D005574 2.4e-192 676.0 520 64.4
Medtr2g026030 Medicago truncatula HOM05D004898 ORTHO05D005574 4.1e-192 675.2 527 64.1
unitig_748.g7600 Utricularia gibba HOM05D004898 ORTHO05D005574 1.2e-191 673.7 464 70.9
Actinidia34018 Actinidia chinensis HOM05D004898 ORTHO05D005574 2.0e-191 672.9 453 74.0
Lalb_Chr18g0057021 Lupinus albus HOM05D004898 ORTHO05D005574 2.0e-191 672.9 529 63.1
Phvul.006G142700 Phaseolus vulgaris HOM05D004898 ORTHO05D005574 5.0e-190 668.3 461 70.7
Os09g0484900 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 3.6e-188 662.1 535 60.6
Zm00001eb158920 Zea mays HOM05D004898 ORTHO05D005574 8.9e-179 630.9 530 59.2
SalBow8G1501 Salvia bowleyana HOM05D004898 ORTHO05D005574 3.7e-177 625.5 428 72.9
Zm00001eb316570 Zea mays HOM05D004898 ORTHO05D005574 1.9e-176 623.2 523 58.3
Os08g0503700 Oryza sativa ssp. japonica HOM05D004898 ORTHO05D005574 2.0e-175 619.8 483 61.7
vmacro03635 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 1.7e-174 616.7 392 76.0
AUR62021848 Chenopodium quinoa HOM05D004898 ORTHO05D005574 5.0e-174 615.1 360 83.9
VMungo0540G0197 Vigna mungo HOM05D004898 ORTHO05D005574 1.5e-173 613.6 516 61.4
Aqoxy4G02191 Aquilegia oxysepala HOM05D004898 ORTHO05D005574 6.8e-171 604.7 385 77.1
CSS0031856 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 2.3e-163 579.7 387 73.1
TPR.G30453 Trifolium pratense HOM05D004898 ORTHO05D005574 1.7e-161 573.5 525 57.1
Ca_00729_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 2.9e-161 572.8 461 62.0
TPR.G30452 Trifolium pratense HOM05D004898 ORTHO05D005574 6.6e-158 561.6 529 57.3
TPR.G5945 Trifolium pratense HOM05D004898 ORTHO05D005574 5.4e-152 542.0 392 67.6
Ca_21041_v3 Cicer arietinum L. HOM05D004898 ORTHO05D005574 5.1e-150 535.4 388 66.8
Migut.M01405 Erythranthe guttata HOM05D004898 ORTHO05D005574 1.3e-148 530.8 321 80.4
MD10G1332900 Malus domestica HOM05D004898 ORTHO05D005574 2.4e-144 516.5 362 70.4
SEGI_04913 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 3.7e-132 476.1 326 69.6
SMO118G0209 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 6.4e-129 465.3 472 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1091 Anthoceros agrestis HOM05D004898 ORTHO05D005574 1.0e-126 458.0 487 48.3
SMO270G0136 Selaginella moellendorffii HOM05D004898 ORTHO05D005574 1.3e-121 441.0 455 48.8
Pp3c15_15560 Physcomitrium patens HOM05D004898 ORTHO05D005574 5.5e-112 409.1 537 41.7
Mapoly0082s0008 Marchantia polymorpha HOM05D004898 ORTHO05D005574 3.4e-106 389.8 504 39.9
Eucgr.L01902 Eucalyptus grandis HOM05D004898 ORTHO05D005574 1.5e-101 374.4 223 83.0
Nitab4.5_0003626g0040 Nicotiana tabacum HOM05D004898 ORTHO05D005574 4.5e-90 336.3 245 71.0
BcaC06g31368 Brassica carinata HOM05D004898 ORTHO05D005574 2.8e-76 290.4 193 72.5
FAN22G1464 Fragaria x ananassa HOM05D004898 ORTHO05D005574 1.7e-65 254.6 206 63.6
BcaC06g31369 Brassica carinata HOM05D004898 ORTHO05D005574 2.5e-64 250.8 164 76.2
Glyma.07G265900 Glycine max HOM05D004898 ORTHO05D005574 1.6e-63 248.1 185 66.5
Glyma.09G010800 Glycine max HOM05D004898 ORTHO05D005574 4.4e-53 213.4 171 60.8
TPR.G39985 Trifolium pratense HOM05D004898 ORTHO05D005574 5.8e-45 186.4 160 56.9
vmacro03636 Vaccinium macrocarpon HOM05D004898 ORTHO05D005574 6.0e-42 176.4 135 65.9
CSS0039577 Camellia sinensis var. sinensis HOM05D004898 ORTHO05D005574 3.6e-39 167.2 137 63.5
MD10G1332700 Malus domestica HOM05D004898 ORTHO05D005574 3.6e-39 167.2 163 57.1
TPR.G16605 Trifolium pratense HOM05D004898 ORTHO05D005574 4.9e-36 156.8 132 61.4
CiPaw.02G047500 Carya illinoinensis HOM05D004898 ORTHO05D005574 3.6e-31 140.6 97 67.0
Oeu026504.1 Olea europaea HOM05D004898 ORTHO05D005574 1.8e-30 138.3 149 51.0
SEGI_30483 Sequoiadendron giganteum HOM05D004898 ORTHO05D005574 3.2e-27 127.5 145 52.4
Cfa025410 Carpinus fangiana HOM05D004898 ORTHO05D005574 9.9e-21 105.9 490 24.3
Cre06.g251650 Chlamydomonas reinhardtii HOM05D004898 ORTHO05D005574 9.9e-21 105.9 479 25.1
TPR.G14633 Trifolium pratense HOM05D004898 ORTHO05D005574 9.9e-21 105.9 71 70.4
MD10G1333600 Malus domestica HOM05D004898 ORTHO05D005574 5.5e-19 100.1 74 67.6
SEGI_07134 Sequoiadendron giganteum HOM05D001687 ORTHO05D001608 7.6e-13 79.7 67 56.7
SEGI_26459 Sequoiadendron giganteum HOM05D000824 ORTHO05D001608 7.6e-13 79.7 67 56.7
VMungo1383G2427 Vigna mungo HOM05D035140 ORTHO05D005574 3.0e-09 67.8 46 69.6
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 1.6e-07 62.0 46 60.9
Zm00001eb361420 Zea mays HOM05D032919 ORTHO05D005574 3.7e-07 60.8 43 62.8
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 1.4e-06 58.9 46 58.7


User provided reference genes

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