Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 4.6e-68 261.2 136 100.0
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 3.9e-59 231.5 136 86.8
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 6.4e-46 187.6 136 71.3
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 6.2e-41 171.0 135 68.1
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 3.5e-36 155.2 161 55.9
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 5.8e-31 137.9 140 57.9
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.1e-29 133.7 116 62.9
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 1.3e-27 126.7 138 55.1
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 6.7e-27 124.4 141 51.8
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 8.7e-27 124.0 135 54.8
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 1.5e-26 123.2 127 55.1
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 9.7e-26 120.6 127 55.9
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 9.7e-26 120.6 127 55.9
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 1.6e-25 119.8 138 52.9
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 4.8e-25 118.2 138 54.3
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 1.4e-24 116.7 127 54.3
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 1.5e-23 113.2 127 50.4
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 2.0e-23 112.8 130 53.8
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.4e-23 112.1 141 52.5
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.7e-22 109.8 114 55.3
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 2.9e-22 109.0 141 51.8
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 2.9e-22 109.0 132 52.3
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.8e-22 108.6 117 53.8
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 5.0e-22 108.2 143 50.3
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 1.1e-21 107.1 138 50.0
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.5e-21 105.9 138 48.6
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.2e-21 105.5 128 50.0
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 3.2e-21 105.5 116 59.5
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 7.2e-21 104.4 138 50.7
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 9.4e-21 104.0 139 49.6
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 1.2e-20 103.6 137 48.2
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 4.6e-20 101.7 128 48.4
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 1.4e-19 100.1 136 44.9
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 2.3e-19 99.4 139 46.8
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 3.0e-19 99.0 128 49.2
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 6.7e-19 97.8 140 45.7
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 8.8e-19 97.4 137 48.9
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.5e-18 96.7 137 51.1
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 2.5e-18 95.9 128 48.4
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 3.3e-18 95.5 137 46.7
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 3.3e-18 95.5 135 48.1
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 3.3e-18 95.5 138 43.5
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 3.3e-18 95.5 140 47.9
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 7.4e-18 94.4 141 44.7
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 1.3e-17 93.6 141 44.7
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.3e-17 93.6 121 45.5
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 3.7e-17 92.0 88 55.7
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 3.7e-17 92.0 128 43.0
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 3.7e-17 92.0 128 44.5
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 4.8e-17 91.7 111 48.6
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 4.8e-17 91.7 111 48.6
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 4.8e-17 91.7 100 55.0
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 4.8e-17 91.7 140 45.7
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 6.3e-17 91.3 140 45.0
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 1.1e-16 90.5 133 43.6
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 1.4e-16 90.1 129 42.6
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 1.4e-16 90.1 116 44.8
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 1.4e-16 90.1 127 42.5
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 1.8e-16 89.7 127 45.7
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 2.4e-16 89.4 126 46.0
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 2.4e-16 89.4 125 46.4
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 3.1e-16 89.0 126 42.9
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 5.3e-16 88.2 139 46.8
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.9e-16 87.8 125 43.2
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 9.1e-16 87.4 115 49.6
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 1.5e-15 86.7 133 42.9
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 4.5e-15 85.1 134 41.0
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 5.9e-15 84.7 136 39.7
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 7.7e-15 84.3 135 43.7
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 1.3e-14 83.6 128 44.5
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 5.0e-14 81.6 127 39.4
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 5.0e-14 81.6 126 42.9
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 6.5e-14 81.3 137 41.6
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 6.5e-14 81.3 133 40.6
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 6.5e-14 81.3 112 48.2
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 2.5e-13 79.3 130 43.8
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 2.5e-13 79.3 130 44.6
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 3.2e-13 79.0 126 42.1
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 1.2e-12 77.0 133 39.8
PSO782G0796 Papaver somniferum HOM05D000509 ORTHO05D006393 1.6e-12 76.6 129 40.3
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 1.6e-12 76.6 126 42.1
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.6e-12 75.5 133 42.9
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.6e-12 75.5 136 41.9
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.6e-12 75.5 136 41.9
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 4.7e-12 75.1 127 40.9
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 4.7e-12 75.1 129 41.1
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 6.1e-12 74.7 133 42.9
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 6.1e-12 74.7 101 45.5
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 1.0e-11 73.9 74 48.6
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 1.0e-11 73.9 138 38.4
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 3.0e-11 72.4 117 41.0
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 3.0e-11 72.4 117 41.0
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 3.0e-11 72.4 120 40.8
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 3.9e-11 72.0 144 39.6
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 6.7e-11 71.2 150 40.0
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 6.7e-11 71.2 158 37.3
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.1e-10 70.5 122 36.9
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 1.5e-10 70.1 115 43.5
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 4.4e-10 68.6 74 47.3
A04p01140 Brassica napus HOM05D000509 ORTHO05D006393 5.7e-10 68.2 117 38.5
BraA04t15830Z Brassica rapa HOM05D000509 ORTHO05D006393 5.7e-10 68.2 117 38.5
Aa31LG1G27330 Aethionema arabicum HOM05D000509 ORTHO05D006393 7.4e-10 67.8 74 45.9
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 1.3e-09 67.0 79 46.8
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.7e-09 66.6 100 42.0
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 1.7e-09 66.6 120 40.8
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 1.7e-09 66.6 127 35.4
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 3.7e-09 65.5 75 44.0
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 3.7e-09 65.5 75 44.0
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 4.8e-09 65.1 75 44.0
CARHR171710 Cardamine hirsuta HOM05D000509 ORTHO05D006393 6.3e-09 64.7 75 42.7
Sc09g0004100 Simmondsia chinensis HOM05D000509 ORTHO05D006393 6.3e-09 64.7 87 40.2
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 1.1e-08 63.9 145 41.4
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 1.8e-08 63.2 112 38.4
FAN01G0359 Fragaria x ananassa HOM05D000509 ORTHO05D006393 4.1e-08 62.0 135 37.0
ATR0680G086 Amborella trichopoda HOM05D000509 ORTHO05D006393 5.3e-08 61.6 99 42.4
PSO339G4277 Papaver somniferum HOM05D000509 ORTHO05D006393 5.3e-08 61.6 128 35.9
Aa31LG5G5170 Aethionema arabicum HOM05D000509 ORTHO05D006393 9.1e-08 60.8 100 45.0
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 2.0e-07 59.7 143 40.6
DCAR_015993 Daucus carota HOM05D000509 ORTHO05D006393 2.6e-07 59.3 94 43.6
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 3.4e-07 58.9 104 44.2
Aqoxy7G00306 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 4.5e-07 58.5 87 42.5
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 5.9e-07 58.2 117 37.6
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 5.9e-07 58.2 117 37.6
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 5.9e-07 58.2 79 41.8
PSO063G2671 Papaver somniferum HOM05D000509 ORTHO05D006393 1.0e-06 57.4 128 36.7
Potri.006G202400 Populus trichocarpa HOM05D000509 ORTHO05D006393 1.7e-06 56.6 87 46.0
BolC4t24686H Brassica oleracea HOM05D000509 ORTHO05D006393 2.9e-06 55.8 118 36.4
Peaxi162Scf00020g00322 Petunia axillaris HOM05D000509 ORTHO05D006393 2.9e-06 55.8 79 44.3
AT3G61370 Arabidopsis thaliana HOM05D000509 ORTHO05D006393 3.8e-06 55.5 117 35.9
QL11p053603 Quercus lobata HOM05D000509 ORTHO05D006393 3.8e-06 55.5 66 43.9
Medtr8g095650 Medicago truncatula HOM05D000509 ORTHO05D006393 8.5e-06 54.3 101 38.6


User provided reference genes

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