Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 0.0e+00 1162.9 571 100.0
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 1.5e-250 869.4 570 74.4
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 1.0e-246 856.7 571 74.4
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 2.2e-244 849.0 566 71.2
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 2.2e-244 849.0 564 71.1
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 5.9e-242 840.9 565 70.4
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 2.9e-241 838.6 566 70.3
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 1.1e-240 836.6 561 71.1
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.2e-239 833.2 565 70.3
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 7.9e-239 830.5 566 69.8
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 3.0e-238 828.6 567 70.0
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.1e-237 826.6 564 70.4
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 5.7e-237 824.3 568 69.0
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 5.7e-237 824.3 564 69.3
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 9.7e-237 823.5 567 69.1
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 1.7e-236 822.8 565 70.6
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 1.8e-235 819.3 568 68.7
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 2.4e-235 818.9 568 68.7
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.2e-234 816.6 563 70.3
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 2.6e-234 815.5 566 68.0
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 3.5e-234 815.1 567 69.0
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 7.7e-234 813.9 565 69.0
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 1.0e-233 813.5 564 68.8
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.3e-233 813.1 565 67.6
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 8.5e-233 810.4 564 67.2
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 1.9e-232 809.3 567 68.1
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 1.9e-232 809.3 566 67.1
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 3.2e-232 808.5 572 66.8
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 5.5e-232 807.7 566 66.4
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 7.2e-232 807.4 565 69.0
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.6e-231 806.2 565 68.7
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 1.4e-230 803.1 568 71.5
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 3.7e-228 795.0 567 67.9
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 4.8e-228 794.7 563 67.1
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 1.4e-227 793.1 583 65.9
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 9.1e-227 790.4 525 72.2
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 1.7e-225 786.2 601 63.9
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 2.2e-225 785.8 565 65.1
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 8.5e-225 783.9 527 75.1
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 1.1e-224 783.5 567 66.1
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.5e-224 783.1 616 63.3
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 2.5e-224 782.3 566 65.7
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 3.6e-223 778.5 539 69.6
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 1.8e-222 776.2 565 64.8
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 1.8e-222 776.2 565 65.3
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 3.0e-222 775.4 565 66.0
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 6.8e-222 774.2 527 74.2
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 1.2e-221 773.5 565 64.4
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 4.4e-221 771.5 565 65.0
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 1.3e-220 770.0 568 65.1
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 2.8e-220 768.8 564 65.4
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.4e-219 766.5 567 66.3
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 3.1e-219 765.4 566 64.7
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.1e-219 765.0 564 67.4
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 2.0e-218 762.7 568 64.3
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 4.5e-218 761.5 562 65.7
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.3e-217 760.0 565 65.3
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 5.0e-217 758.1 539 67.2
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 1.0e-214 750.4 525 68.8
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.5e-213 746.5 565 63.4
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.8e-211 739.6 570 63.2
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 3.1e-211 738.8 570 63.0
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 5.4e-211 738.0 570 62.6
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 1.2e-210 736.9 571 62.3
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 7.7e-210 734.2 565 62.8
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 1.3e-209 733.4 539 65.3
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 3.8e-209 731.9 565 62.5
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 1.6e-207 726.5 530 65.8
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 4.7e-207 724.9 572 64.2
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 3.0e-206 722.2 532 67.5
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 1.8e-203 713.0 570 62.5
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 2.4e-203 712.6 503 66.6
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 5.4e-203 711.4 524 66.6
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 4.0e-198 695.3 564 61.0
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 4.4e-197 691.8 527 63.8
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 4.1e-195 685.3 591 59.2
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 8.9e-190 667.5 459 69.1
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 8.9e-190 667.5 538 60.8
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 2.6e-189 666.0 564 56.4
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 8.3e-188 661.0 458 68.1
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 8.6e-185 651.0 459 67.3
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.4e-182 643.7 479 67.0
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 1.9e-176 623.2 495 63.4
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 1.2e-173 614.0 684 49.6
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 3.2e-171 605.9 598 54.7
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 1.6e-167 593.6 566 51.2
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 5.8e-165 585.1 594 51.2
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 2.4e-155 553.1 480 57.9
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 1.6e-151 540.4 535 49.5
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 4.5e-141 505.8 409 61.4
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 2.5e-123 446.8 305 67.9
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 6.5e-116 422.2 597 40.4
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 1.7e-111 407.5 319 63.6
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 3.7e-111 406.4 275 66.2
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 1.8e-110 404.1 316 62.7
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.4e-105 387.9 719 34.5
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 4.0e-105 386.3 414 50.2
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 5.2e-105 386.0 340 54.4
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.7e-103 380.9 308 58.4
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 3.6e-98 363.2 588 33.5
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 1.6e-85 321.2 262 60.7
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 2.7e-85 320.5 268 60.1
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 3.5e-85 320.1 278 57.2
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.3e-83 313.5 250 62.8
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 2.2e-79 300.8 245 56.7
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 7.8e-77 292.4 209 65.6
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 1.3e-63 248.4 193 60.1
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 9.2e-62 242.3 156 74.4
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 3.1e-57 227.3 183 61.2
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 3.4e-56 223.8 691 27.6
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 1.3e-55 221.9 210 53.3
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 6.4e-55 219.5 144 69.4
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 9.3e-46 189.1 185 51.9
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 1.3e-42 178.7 170 56.5
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 3.1e-41 174.1 182 52.2
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 2.7e-37 161.0 144 56.9
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 5.3e-33 146.7 95 69.5
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 4.5e-32 143.7 86 75.6
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 6.7e-28 129.8 148 50.0
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 3.7e-18 97.4 59 79.7
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 6.3e-18 96.7 117 43.6
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 1.1e-11 75.9 62 58.1
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 2.6e-11 74.7 79 49.4
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 4.8e-10 70.5 53 64.2


User provided reference genes

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