Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g19985 Beta vulgaris HOM05D003330 ORTHO05D003805 0.0e+00 1365.5 688 100.0
EL10Ac6g13981 Beta vulgaris HOM05D003330 ORTHO05D003805 5.7e-90 336.3 205 84.4
EL10Ac4g09084 Beta vulgaris HOM05D003330 ORTHO05D003805 4.2e-77 293.5 186 78.5
EL10Ac3g06289 Beta vulgaris HOM05D003330 ORTHO05D003805 2.6e-66 257.7 201 69.7
AUR62001147 Chenopodium quinoa HOM05D003330 ORTHO05D003805 3.5e-55 220.7 187 61.0
AUR62016529 Chenopodium quinoa HOM05D003330 ORTHO05D003805 1.0e-54 219.2 187 60.4
Sc17g0002010 Simmondsia chinensis HOM05D003330 ORTHO05D003805 1.7e-54 218.4 186 59.7
Ah.08g214460 Amaranthus hybridus HOM05D003330 ORTHO05D003805 2.2e-54 218.0 186 57.0
Hund18440 Selenicereus undatus HOM05D003330 ORTHO05D003805 1.2e-52 212.2 186 56.5
Hund05586 Selenicereus undatus HOM05D003330 ORTHO05D003805 4.7e-52 210.3 186 57.5
FAN27G2838 Fragaria x ananassa HOM05D003330 ORTHO05D003805 3.0e-51 207.6 193 56.0
FAN15G2534 Fragaria x ananassa HOM05D003330 ORTHO05D003805 2.6e-50 204.5 186 56.5
FAN24G2302 Fragaria x ananassa HOM05D003330 ORTHO05D003805 2.6e-50 204.5 193 55.4
FvH4_2g18370 Fragaria vesca HOM05D003330 ORTHO05D003805 3.4e-50 204.1 193 55.4
Prupe.8G196500 Prunus persica HOM05D003330 ORTHO05D003805 8.3e-49 199.5 187 54.5
RcHm_v2.0_Chr6g0283751 Rosa chinensis HOM05D003330 ORTHO05D003805 1.1e-48 199.1 199 52.8
Gohir.A07G198600 Gossypium hirsutum HOM05D003330 ORTHO05D003805 3.1e-48 197.6 189 56.1
Haze_03351 Corylus avellana HOM05D003330 ORTHO05D003805 4.1e-48 197.2 201 51.2
Duzib211G0662 Durio zibethinus HOM05D003330 ORTHO05D003805 5.4e-48 196.8 189 55.0
Ciclev10020030m.g Citrus clementina HOM05D003330 ORTHO05D003805 9.1e-48 196.1 201 52.7
EL10Ac7g17933 Beta vulgaris HOM05D003330 ORTHO05D003805 1.6e-47 195.3 186 54.8
Cpa.g.sc8.124 Carica papaya HOM05D003330 ORTHO05D003805 3.5e-47 194.1 198 52.5
Cfa010402 Carpinus fangiana HOM05D003330 ORTHO05D003805 4.5e-47 193.7 198 52.0
Gorai.001G231000 Gossypium raimondii HOM05D003330 ORTHO05D003805 4.5e-47 193.7 189 55.6
CSS0049579 Camellia sinensis var. sinensis HOM05D003330 ORTHO05D003805 2.3e-46 191.4 195 53.3
MD10G1157600 Malus domestica HOM05D003330 ORTHO05D003805 5.0e-46 190.3 197 50.8
CSS0011751 Camellia sinensis var. sinensis HOM05D003330 ORTHO05D003805 6.6e-46 189.9 198 52.5
QL09p049903 Quercus lobata HOM05D003330 ORTHO05D003805 1.1e-45 189.1 196 51.5
Ah.08g214760 Amaranthus hybridus HOM05D003330 ORTHO05D003805 1.5e-45 188.7 186 52.2
EL10Ac6g13228 Beta vulgaris HOM05D003330 ORTHO05D003805 1.5e-45 188.7 187 54.0
Duzib138G0157 Durio zibethinus HOM05D003330 ORTHO05D003805 1.5e-45 188.7 188 53.7
Gohir.D07G205000 Gossypium hirsutum HOM05D003330 ORTHO05D003805 1.5e-45 188.7 189 55.0
Thecc.01G216800 Theobroma cacao HOM05D003330 ORTHO05D003805 1.9e-45 188.3 195 53.3
Actinidia23391 Actinidia chinensis HOM05D003330 ORTHO05D003805 5.5e-45 186.8 201 49.8
Potri.014G195000 Populus trichocarpa HOM05D003330 ORTHO05D003805 2.8e-44 184.5 198 51.0
Actinidia30042 Actinidia chinensis HOM05D003330 ORTHO05D003805 4.7e-44 183.7 201 49.8
Dinv14525 Davidia involucrata HOM05D003330 ORTHO05D003805 1.0e-43 182.6 201 49.8
CSS0043597 Camellia sinensis var. sinensis HOM05D003330 ORTHO05D003805 1.4e-43 182.2 201 50.2
Glyma.08G347400 Glycine max HOM05D003330 ORTHO05D003805 1.4e-43 182.2 197 49.2
TWI75G0253 Tripterygium wilfordii HOM05D003330 ORTHO05D003805 1.4e-43 182.2 216 45.4
Cc01_g16540 Coffea canephora HOM05D003330 ORTHO05D003805 2.3e-43 181.4 200 49.0
Glyma.18G158900 Glycine max HOM05D003330 ORTHO05D003805 2.3e-43 181.4 197 48.2
Sabra02G0188100 Salix brachista HOM05D003330 ORTHO05D003805 2.3e-43 181.4 187 50.8
vmacro02791 Vaccinium macrocarpon HOM05D003330 ORTHO05D003805 3.0e-43 181.0 200 49.5
VMungo1383G0348 Vigna mungo HOM05D003330 ORTHO05D003805 5.2e-43 180.3 197 49.2
Lalb_Chr03g0041371 Lupinus albus HOM05D003330 ORTHO05D003805 8.9e-43 179.5 198 48.5
Rhsim01G0251100 Rhododendron simsii HOM05D003330 ORTHO05D003805 8.9e-43 179.5 200 50.0
CiPaw.14G040100 Carya illinoinensis HOM05D003330 ORTHO05D003805 1.2e-42 179.1 198 49.0
Lalb_Chr19g0125901 Lupinus albus HOM05D003330 ORTHO05D003805 1.2e-42 179.1 198 48.5
MD05G1169300 Malus domestica HOM05D003330 ORTHO05D003805 1.2e-42 179.1 197 49.2
Rhsim13G0049900 Rhododendron simsii HOM05D003330 ORTHO05D003805 1.2e-42 179.1 200 49.0
Medtr7g055700 Medicago truncatula HOM05D003330 ORTHO05D003805 1.5e-42 178.7 198 49.5
Dinv19152 Davidia involucrata HOM05D003330 ORTHO05D003805 2.0e-42 178.3 203 50.7
Dinv28843 Davidia involucrata HOM05D003330 ORTHO05D003805 2.0e-42 178.3 203 50.2
Actinidia09460 Actinidia chinensis HOM05D003330 ORTHO05D003805 4.4e-42 177.2 202 50.5
AUR62001148 Chenopodium quinoa HOM05D003330 ORTHO05D003805 4.4e-42 177.2 188 50.5
Phvul.008G132600 Phaseolus vulgaris HOM05D003330 ORTHO05D003805 4.4e-42 177.2 197 48.2
CiPaw.13G050400 Carya illinoinensis HOM05D003330 ORTHO05D003805 7.5e-42 176.4 198 49.5
Hma1.2p1_0149F.1_g066530 Hydrangea macrophylla HOM05D003330 ORTHO05D003805 9.8e-42 176.0 200 48.5
Psat3g149760 Pisum sativum HOM05D003330 ORTHO05D003805 1.7e-41 175.3 198 49.0
vmacro14723 Vaccinium macrocarpon HOM05D003330 ORTHO05D003805 1.7e-41 175.3 200 49.5
Gohir.A11G140200 Gossypium hirsutum HOM05D003330 ORTHO05D003805 2.2e-41 174.9 187 51.3
Manes.12G049200 Manihot esculenta HOM05D003330 ORTHO05D003805 2.2e-41 174.9 188 51.6
COL.COLO4_16110 Corchorus olitorius HOM05D003330 ORTHO05D003805 3.7e-41 174.1 189 50.8
THA.LOC104818979 Tarenaya hassleriana HOM05D003330 ORTHO05D003805 4.9e-41 173.7 227 48.5
VMungo0331G0963 Vigna mungo HOM05D003330 ORTHO05D003805 4.9e-41 173.7 195 48.2
Hma1.2p1_0226F.1_g095240 Hydrangea macrophylla HOM05D003330 ORTHO05D003805 6.3e-41 173.3 197 51.8
THA.LOC104822486 Tarenaya hassleriana HOM05D003330 ORTHO05D003805 6.3e-41 173.3 201 48.3
PGR083G2466 Punica granatum HOM05D003330 ORTHO05D003805 1.4e-40 172.2 209 49.8
TPR.G29158 Trifolium pratense HOM05D003330 ORTHO05D003805 1.4e-40 172.2 198 48.0
TWI36G0434 Tripterygium wilfordii HOM05D003330 ORTHO05D003805 1.4e-40 172.2 212 45.3
Thhalv10020678m.g Eutrema salsugineum HOM05D003330 ORTHO05D003805 1.8e-40 171.8 200 52.5
Medtr8g016030 Medicago truncatula HOM05D003330 ORTHO05D003805 1.8e-40 171.8 189 49.7
CANSAT01G2062 Cannabis sativa HOM05D003330 ORTHO05D003805 5.4e-40 170.2 199 46.2
Ca_07508_v3 Cicer arietinum L. HOM05D003330 ORTHO05D003805 5.4e-40 170.2 199 47.7
Solyc06g083230.3 Solanum lycopersicum HOM05D003330 ORTHO05D003805 5.4e-40 170.2 186 50.0
MSTRG.18828 Avicennia marina HOM05D003330 ORTHO05D003805 1.2e-39 169.1 204 48.0
Sopen06g034620 Solanum pennellii HOM05D003330 ORTHO05D003805 1.2e-39 169.1 186 49.5
HanXRQChr01g0015341 Helianthus annuus HOM05D003330 ORTHO05D003805 1.6e-39 168.7 200 46.5
Lj3g0017252 Lotus japonicus HOM05D003330 ORTHO05D003805 1.6e-39 168.7 191 49.7
Peaxi162Scf01312g00058 Petunia axillaris HOM05D003330 ORTHO05D003805 2.7e-39 167.9 187 50.3
Potri.002G247100 Populus trichocarpa HOM05D003330 ORTHO05D003805 2.7e-39 167.9 187 49.7
AUR62016528 Chenopodium quinoa HOM05D003330 ORTHO05D003805 3.5e-39 167.5 188 49.5
PGSC0003DMG400020105 Solanum tuberosum HOM05D003330 ORTHO05D003805 4.5e-39 167.2 187 49.2
Eucgr.H00758 Eucalyptus grandis HOM05D003330 ORTHO05D003805 5.9e-39 166.8 266 41.7
Lj2C1122T12 Lonicera japonica HOM05D003330 ORTHO05D003805 5.9e-39 166.8 200 49.0
AT3G07270 Arabidopsis thaliana HOM05D003330 ORTHO05D003805 7.8e-39 166.4 189 50.8
CsaV3_1G041250 Cucumis sativus L. HOM05D003330 ORTHO05D003805 7.8e-39 166.4 192 45.8
arahy.Tifrunner.gnm1.ann1.K4VXRT Arachis hypogaea HOM05D003330 ORTHO05D003805 1.0e-38 166.0 198 46.0
ECA248G3375 Erigeron canadensis HOM05D003330 ORTHO05D003805 1.0e-38 166.0 200 47.0
Nitab4.5_0002671g0010 Nicotiana tabacum HOM05D003330 ORTHO05D003805 1.0e-38 166.0 198 48.0
Nitab4.5_0003020g0100 Nicotiana tabacum HOM05D003330 ORTHO05D003805 1.0e-38 166.0 187 49.7
VMungo0331G0017 Vigna mungo HOM05D003330 ORTHO05D003805 1.0e-38 166.0 208 46.6
Peaxi162Scf01312g00009 Petunia axillaris HOM05D003330 ORTHO05D003805 1.3e-38 165.6 187 49.7
Oeu023105.2 Olea europaea HOM05D003330 ORTHO05D003805 1.7e-38 165.2 201 47.8
Glyma.03G085500 Glycine max HOM05D003330 ORTHO05D003805 2.3e-38 164.9 203 44.8
TPR.G31568 Trifolium pratense HOM05D003330 ORTHO05D003805 2.9e-38 164.5 189 46.0
Atru.chr6.1444 Acer truncatum HOM05D003330 ORTHO05D003805 3.9e-38 164.1 189 47.1
CAN.G874.15 Capsicum annuum HOM05D003330 ORTHO05D003805 3.9e-38 164.1 180 51.7
Nn3g20070 Nelumbo nucifera HOM05D003330 ORTHO05D003805 3.9e-38 164.1 200 47.0
Sp3g06200 Schrenkiella parvula HOM05D003330 ORTHO05D003805 3.9e-38 164.1 189 49.2
Glyma.16G089300 Glycine max HOM05D003330 ORTHO05D003805 5.0e-38 163.7 188 47.3
arahy.Tifrunner.gnm1.ann1.T9C3HB Arachis hypogaea HOM05D003330 ORTHO05D003805 6.6e-38 163.3 198 45.5
CsaV3_7G026240 Cucumis sativus L. HOM05D003330 ORTHO05D003805 8.6e-38 162.9 192 45.8
ClCG09G008720 Citrullus lanatus HOM05D003330 ORTHO05D003805 1.1e-37 162.5 191 45.5
MELO3C021071.2 Cucumis melo HOM05D003330 ORTHO05D003805 1.1e-37 162.5 192 46.4
Ca_23216_v3 Cicer arietinum L. HOM05D003330 ORTHO05D003805 1.5e-37 162.2 189 46.0
Carub.0003s0680 Capsella rubella HOM05D003330 ORTHO05D003805 1.9e-37 161.8 189 50.3
Medtr8g012570 Medicago truncatula HOM05D003330 ORTHO05D003805 1.9e-37 161.8 188 45.7
Atru.chr1.3019 Acer truncatum HOM05D003330 ORTHO05D003805 2.5e-37 161.4 202 43.6
Psat4g204360 Pisum sativum HOM05D003330 ORTHO05D003805 2.5e-37 161.4 199 44.7
Aa31LG5G17840 Aethionema arabicum HOM05D003330 ORTHO05D003805 3.3e-37 161.0 193 46.1
Sed0021953 Sechium edule HOM05D003330 ORTHO05D003805 7.3e-37 159.8 196 46.4
BcaC05g29852 Brassica carinata HOM05D003330 ORTHO05D003805 9.5e-37 159.5 186 51.1
CARHR081920 Cardamine hirsuta HOM05D003330 ORTHO05D003805 9.5e-37 159.5 200 47.0
AL3G18570 Arabidopsis lyrata HOM05D003330 ORTHO05D003805 1.6e-36 158.7 189 50.3
C05p60090 Brassica napus HOM05D003330 ORTHO05D003805 2.1e-36 158.3 186 50.5
BolC5t34662H Brassica oleracea HOM05D003330 ORTHO05D003805 2.1e-36 158.3 186 50.5
BraA01t04390Z Brassica rapa HOM05D003330 ORTHO05D003805 2.1e-36 158.3 224 44.2
Lsat_1_v5_gn_9_17281 Lactuca sativa HOM05D003330 ORTHO05D003805 2.8e-36 157.9 193 44.6
BcaB07g30035 Brassica carinata HOM05D003330 ORTHO05D003805 3.6e-36 157.5 186 48.9
Glyma.03G085100 Glycine max HOM05D003330 ORTHO05D003805 3.6e-36 157.5 194 46.4
Sed0013413 Sechium edule HOM05D003330 ORTHO05D003805 4.7e-36 157.1 193 46.1
BNapus_Darmor_BZH_scaffold_109p00160 Brassica napus HOM05D003330 ORTHO05D003805 6.1e-36 156.8 194 46.9
Nitab4.5_0000403g0090 Nicotiana tabacum HOM05D003330 ORTHO05D003805 1.8e-35 155.2 204 44.1
A02p37600 Brassica napus HOM05D003330 ORTHO05D003805 3.1e-35 154.5 212 43.9
Sp2g18970 Schrenkiella parvula HOM05D003330 ORTHO05D003805 3.1e-35 154.5 187 50.3
SalBow3G1870 Salvia bowleyana HOM05D003330 ORTHO05D003805 6.8e-35 153.3 202 41.6
BcaC05g29742 Brassica carinata HOM05D003330 ORTHO05D003805 1.5e-34 152.1 197 47.7
Psat0s4107g0040 Pisum sativum HOM05D003330 ORTHO05D003805 2.6e-34 151.4 194 45.9
BcaC03g17663 Brassica carinata HOM05D003330 ORTHO05D003805 4.4e-34 150.6 186 47.8
A05p40970 Brassica napus HOM05D003330 ORTHO05D003805 5.8e-34 150.2 203 45.8
BolC2t11730H Brassica oleracea HOM05D003330 ORTHO05D003805 5.8e-34 150.2 183 48.1
Peaxi162Scf00487g00619 Petunia axillaris HOM05D003330 ORTHO05D003805 7.5e-34 149.8 189 45.5
TAR636G1967 Trochodendron aralioides HOM05D003330 ORTHO05D003805 7.5e-34 149.8 211 44.5
EL10Ac5g11651 Beta vulgaris HOM05D003330 ORTHO05D003805 9.8e-34 149.4 186 47.8
BolC1t05562H Brassica oleracea HOM05D003330 ORTHO05D003805 2.2e-33 148.3 194 43.8
Thhalv10004230m.g Eutrema salsugineum HOM05D003330 ORTHO05D003805 6.4e-33 146.7 205 45.4
Migut.N00638 Erythranthe guttata HOM05D003330 ORTHO05D003805 1.9e-32 145.2 191 47.6
BraA02t08744Z Brassica rapa HOM05D003330 ORTHO05D003805 3.2e-32 144.4 214 43.9
C02p56690 Brassica napus HOM05D003330 ORTHO05D003805 5.4e-32 143.7 187 47.1
CDE05G3099 Ceratophyllum demersum HOM05D003330 ORTHO05D003805 5.4e-32 143.7 201 40.8
Phvul.010G022900 Phaseolus vulgaris HOM05D003330 ORTHO05D003805 9.2e-32 142.9 194 43.3
TAR365G0843 Trochodendron aralioides HOM05D003330 ORTHO05D003805 9.2e-32 142.9 209 40.7
BcaB04g21319 Brassica carinata HOM05D003330 ORTHO05D003805 2.0e-31 141.7 183 45.4
Aqoxy5G00019 Aquilegia oxysepala HOM05D003330 ORTHO05D003805 4.6e-31 140.6 210 39.5
unitig_0.g1214 Utricularia gibba HOM05D003330 ORTHO05D003805 2.3e-30 138.3 201 43.3
Aqoxy4G02436 Aquilegia oxysepala HOM05D003330 ORTHO05D003805 5.0e-30 137.1 210 39.0
Zm00001eb067370 Zea mays HOM05D003330 ORTHO05D003805 5.0e-30 137.1 186 46.2
Lsat_1_v5_gn_5_177621 Lactuca sativa HOM05D003330 ORTHO05D003805 1.9e-29 135.2 199 41.2
MBI07_g27660_MAGBIO Magnolia biondii HOM05D003330 ORTHO05D003805 3.6e-28 131.0 206 39.8
PSO017G6109 Papaver somniferum HOM05D003330 ORTHO05D003805 3.1e-27 127.9 217 35.0
PSO063G6993 Papaver somniferum HOM05D003330 ORTHO05D003805 5.2e-27 127.1 222 35.1
Actinidia23766 Actinidia chinensis HOM05D003330 ORTHO05D003805 1.5e-26 125.6 121 56.2
ATR0561G197 Amborella trichopoda HOM05D003330 ORTHO05D003805 4.4e-26 124.0 240 33.8
HPP92_011785 Vanilla planifolia HOM05D003330 ORTHO05D003805 5.8e-26 123.6 202 37.1
PSO210G4671 Papaver somniferum HOM05D003330 ORTHO05D003805 1.3e-25 122.5 204 35.3
SGA_v2.0_scaffold77G25273 Striga asiatica HOM05D003330 ORTHO05D003805 2.2e-25 121.7 186 41.4
Zm00001eb432940 Zea mays HOM05D003330 ORTHO05D003805 2.2e-25 121.7 192 42.7
HPP92_013633 Vanilla planifolia HOM05D003330 ORTHO05D003805 4.9e-25 120.6 189 38.6
Nn1g07549 Nelumbo nucifera HOM05D003330 ORTHO05D003805 2.4e-24 118.2 192 41.1
SHI03884 Sapria himalayana HOM05D003330 ORTHO05D003805 1.7e-22 112.1 211 37.0
A05p40950 Brassica napus HOM05D003330 ORTHO05D003805 5.1e-22 110.5 150 45.3
CDE05G3534 Ceratophyllum demersum HOM05D003330 ORTHO05D003805 6.2e-20 103.6 130 46.2
arahy.Tifrunner.gnm1.ann1.VPSC2F Arachis hypogaea HOM05D003330 ORTHO05D003805 1.4e-19 102.4 170 39.4
C05p60080 Brassica napus HOM05D003330 ORTHO05D003805 9.9e-18 96.3 120 48.3
BolC5t34661H Brassica oleracea HOM05D003330 ORTHO05D003805 9.9e-18 96.3 120 48.3
SEGI_24025 Sequoiadendron giganteum HOM05D003330 ORTHO05D003805 6.4e-17 93.6 229 32.8
BcaB04g21299 Brassica carinata HOM05D003330 ORTHO05D003805 1.1e-16 92.8 92 52.2
Lj1g0012576 Lotus japonicus HOM05D003330 ORTHO05D003805 1.6e-15 89.0 127 44.1
Gohir.D08G057950 Gossypium hirsutum HOM05D003330 ORTHO05D003805 1.3e-14 85.9 179 32.4
EL10Ac8g19851 Beta vulgaris HOM05D001621 ORTHO05D016684 1.5e-13 82.4 69 69.6
Manes.13G051100 Manihot esculenta HOM05D003330 ORTHO05D003805 2.5e-13 81.6 60 61.7
VMungo0331G1861 Vigna mungo HOM05D003330 ORTHO05D003805 3.4e-10 71.2 42 71.4
SMO364G0593 Selaginella moellendorffii HOM05D003330 ORTHO05D003805 4.4e-10 70.9 188 31.4
BcaC05g29740 Brassica carinata HOM05D003330 ORTHO05D003805 7.1e-08 63.5 42 66.7
Gorai.004G059200 Gossypium raimondii HOM05D003330 ORTHO05D003805 9.3e-08 63.2 44 63.6
Pp3c11_25080 Physcomitrium patens HOM05D003330 ORTHO05D003805 1.2e-07 62.8 236 28.0
BcaC05g29738 Brassica carinata HOM05D003330 ORTHO05D003805 7.8e-07 60.1 42 69.0
AagrBONN_evm.TU.Sc2ySwM_228.1207 Anthoceros agrestis HOM05D003330 ORTHO05D003805 1.0e-06 59.7 132 32.6
Cfa023672 Carpinus fangiana HOM05D003330 ORTHO05D003805 2.3e-06 58.5 160 30.0
Pp3c7_8060 Physcomitrium patens HOM05D003330 ORTHO05D003805 3.0e-06 58.2 131 34.4
TPR.G29156 Trifolium pratense HOM05D003330 ORTHO05D003805 6.6e-06 57.0 95 42.1


User provided reference genes

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