Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g19949 Beta vulgaris HOM05D003891 ORTHO05D031685 7.2e-44 180.3 96 100.0
EL10Ac3g06525 Beta vulgaris HOM05D003891 ORTHO05D004802 5.0e-29 131.0 94 80.9
EL10Ac5g11707 Beta vulgaris HOM05D003891 ORTHO05D004802 1.3e-16 89.7 55 81.8
EL10Ac9g21550 Beta vulgaris HOM05D003891 ORTHO05D004802 2.9e-16 88.6 48 89.6
EL10Ac3g06456 Beta vulgaris HOM05D003891 ORTHO05D004802 1.6e-14 82.8 47 87.2
AUR62010186 Chenopodium quinoa HOM05D003891 ORTHO05D004802 1.6e-14 82.8 49 81.6
AUR62013187 Chenopodium quinoa HOM05D003891 ORTHO05D004802 1.6e-14 82.8 49 81.6
Hund00096 Selenicereus undatus HOM05D003891 ORTHO05D004802 1.3e-13 79.7 49 79.6
MD10G1142600 Malus domestica HOM05D003891 ORTHO05D004802 1.7e-13 79.3 49 79.6
Lalb_Chr03g0033131 Lupinus albus HOM05D003891 ORTHO05D004802 2.3e-13 79.0 49 81.6
Lalb_Chr19g0131341 Lupinus albus HOM05D003891 ORTHO05D004802 2.3e-13 79.0 49 81.6
MD05G1141200 Malus domestica HOM05D003891 ORTHO05D004802 2.3e-13 79.0 49 77.6
Eucgr.H04996 Eucalyptus grandis HOM05D003891 ORTHO05D004802 3.9e-13 78.2 49 79.6
GSVIVG01023862001 Vitis vinifera HOM05D003891 ORTHO05D004802 3.9e-13 78.2 49 79.6
EL10Ac4g09108 Beta vulgaris HOM05D003891 ORTHO05D004802 5.1e-13 77.8 45 86.7
Glyma.09G154000 Glycine max HOM05D003891 ORTHO05D004802 5.1e-13 77.8 49 79.6
Phvul.004G127600 Phaseolus vulgaris HOM05D003891 ORTHO05D004802 6.6e-13 77.4 49 79.6
Sopen01g054380 Solanum pennellii HOM05D003891 ORTHO05D031685 6.6e-13 77.4 80 55.0
VMungo0464G1760 Vigna mungo HOM05D003891 ORTHO05D004802 6.6e-13 77.4 49 79.6
Lj5C171T9 Lonicera japonica HOM05D003891 ORTHO05D004802 8.6e-13 77.0 49 73.5
Aqoxy6G01549 Aquilegia oxysepala HOM05D003891 ORTHO05D004802 1.1e-12 76.6 49 79.6
CiPaw.06G114500 Carya illinoinensis HOM05D003891 ORTHO05D004802 1.1e-12 76.6 49 79.6
Manes.15G113400 Manihot esculenta HOM05D003891 ORTHO05D004802 1.1e-12 76.6 49 77.6
Medtr6g060550 Medicago truncatula HOM05D003891 ORTHO05D004802 1.1e-12 76.6 49 75.5
Psat6g112760 Pisum sativum HOM05D003891 ORTHO05D004802 1.1e-12 76.6 49 77.6
Sabra04G0139800 Salix brachista HOM05D003891 ORTHO05D004802 1.5e-12 76.3 49 75.5
Actinidia26326 Actinidia chinensis HOM05D003891 ORTHO05D004802 1.9e-12 75.9 49 73.5
Prupe.8G181200 Prunus persica HOM05D003891 ORTHO05D004802 1.9e-12 75.9 49 77.6
Atru.chr5.3571 Acer truncatum HOM05D003891 ORTHO05D004802 2.5e-12 75.5 55 67.3
arahy.Tifrunner.gnm1.ann1.BD83WD Arachis hypogaea HOM05D003891 ORTHO05D004802 2.5e-12 75.5 49 77.6
arahy.Tifrunner.gnm1.ann1.HVI0X6 Arachis hypogaea HOM05D003891 ORTHO05D004802 2.5e-12 75.5 49 77.6
CANSAT25G0951 Cannabis sativa HOM05D003891 ORTHO05D004802 2.5e-12 75.5 49 75.5
RcHm_v2.0_Chr6g0281141 Rosa chinensis HOM05D003891 ORTHO05D004802 2.5e-12 75.5 49 75.5
Sc08g0002090 Simmondsia chinensis HOM05D003891 ORTHO05D004802 2.5e-12 75.5 47 78.7
TPR.G16614 Trifolium pratense HOM05D003891 ORTHO05D004802 2.5e-12 75.5 49 77.6
CARHR107450 Cardamine hirsuta HOM05D003891 ORTHO05D004802 3.3e-12 75.1 49 77.6
ECA233G4850 Erigeron canadensis HOM05D003891 ORTHO05D004802 3.3e-12 75.1 49 73.5
FAN24G0882 Fragaria x ananassa HOM05D003891 ORTHO05D004802 3.3e-12 75.1 48 77.1
Ah.01g017670 Amaranthus hybridus HOM05D003891 ORTHO05D004802 4.3e-12 74.7 49 75.5
Oeu009503.1 Olea europaea HOM05D003891 ORTHO05D004802 4.3e-12 74.7 49 73.5
Potri.009G169000 Populus trichocarpa HOM05D003891 ORTHO05D004802 4.3e-12 74.7 49 75.5
Sabra09G0131200 Salix brachista HOM05D000037 ORTHO05D004802 4.3e-12 74.7 49 75.5
Solyc01g112270.1 Solanum lycopersicum HOM05D003891 ORTHO05D004802 4.3e-12 74.7 78 55.1
TWI75G0797 Tripterygium wilfordii HOM05D003891 ORTHO05D004802 4.3e-12 74.7 49 75.5
FvH4_2g16941 Fragaria vesca HOM05D003891 ORTHO05D004802 5.6e-12 74.3 49 73.5
Lj9A408G77 Lonicera japonica HOM05D003891 ORTHO05D004802 5.6e-12 74.3 48 75.0
Solyc10g074590.2 Solanum lycopersicum HOM05D003891 ORTHO05D004802 5.6e-12 74.3 49 73.5
Sopen10g027080 Solanum pennellii HOM05D003891 ORTHO05D004802 5.6e-12 74.3 49 73.5
PGSC0003DMG400014681 Solanum tuberosum HOM05D003891 ORTHO05D004802 5.6e-12 74.3 49 71.4
TPR.G10657 Trifolium pratense HOM05D003891 ORTHO05D004802 5.6e-12 74.3 49 73.5
HanXRQChr16g0515191 Helianthus annuus HOM05D003891 ORTHO05D004802 7.3e-12 73.9 47 76.6
Lalb_Chr21g0311871 Lupinus albus HOM05D003891 ORTHO05D004802 7.3e-12 73.9 49 73.5
Peaxi162Scf00374g00733 Petunia axillaris HOM05D003891 ORTHO05D004802 7.3e-12 73.9 49 73.5
Potri.004G207700 Populus trichocarpa HOM05D003891 ORTHO05D004802 7.3e-12 73.9 49 75.5
CSS0031527 Camellia sinensis var. sinensis HOM05D003891 ORTHO05D004802 9.6e-12 73.6 49 73.5
Ca_25233_v3 Cicer arietinum L. HOM05D003891 ORTHO05D004802 9.6e-12 73.6 49 73.5
MELO3C015700.2 Cucumis melo HOM05D003891 ORTHO05D004802 9.6e-12 73.6 49 73.5
Cpa.g.sc232.5 Carica papaya HOM05D003891 ORTHO05D004802 1.2e-11 73.2 49 75.5
Dinv41863 Davidia involucrata HOM05D003891 ORTHO05D004802 1.2e-11 73.2 55 65.5
Lalb_Chr21g0311861 Lupinus albus HOM05D003891 ORTHO05D004802 1.2e-11 73.2 49 71.4
Medtr1g076730 Medicago truncatula HOM05D003891 ORTHO05D004802 1.2e-11 73.2 49 73.5
Peaxi162Scf00362g00144 Petunia axillaris HOM05D003891 ORTHO05D004802 1.2e-11 73.2 49 71.4
ATR0605G040 Amborella trichopoda HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 71.4
AL3G50210 Arabidopsis lyrata HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 75.5
AL3G50220 Arabidopsis lyrata HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 75.5
AT2G17340 Arabidopsis thaliana HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 75.5
Carub.0003s3137 Capsella rubella HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 75.5
CAN.G234.2 Capsicum annuum HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 73.5
CiPaw.05G094100 Carya illinoinensis HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 73.5
Ca_09894_v3 Cicer arietinum L. HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 73.5
ClCG02G003290 Citrullus lanatus HOM05D003891 ORTHO05D004802 1.6e-11 72.8 48 77.1
Cc09_g10890 Coffea canephora HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 71.4
CsaV3_7G002080 Cucumis sativus L. HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 73.5
FAN27G1799 Fragaria x ananassa HOM05D003891 ORTHO05D004802 1.6e-11 72.8 48 75.0
Sed0019069 Sechium edule HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 73.5
PGSC0003DMG400016830 Solanum tuberosum HOM05D003891 ORTHO05D004802 1.6e-11 72.8 49 73.5
Carub.0003s3134 Capsella rubella HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 73.5
Carub.0003s3136 Capsella rubella HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 73.5
CARHR243690 Cardamine hirsuta HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 75.5
Dinv14180 Davidia involucrata HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 69.4
Migut.B00004 Erythranthe guttata HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 69.4
MBI01_g17246_MAGBIO Magnolia biondii HOM05D003891 ORTHO05D004802 2.1e-11 72.4 48 75.0
Psat1g106000 Pisum sativum HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 73.5
Psat3g195440 Pisum sativum HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 73.5
QL11p056607 Quercus lobata HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 75.5
THA.LOC104807410 Tarenaya hassleriana HOM05D003891 ORTHO05D004802 2.1e-11 72.4 49 75.5
CDE10G0412 Ceratophyllum demersum HOM05D003891 ORTHO05D004802 2.8e-11 72.0 49 67.3
Ca_09895_v3 Cicer arietinum L. HOM05D003891 ORTHO05D004802 2.8e-11 72.0 48 75.0
Lsat_1_v5_gn_8_120640 Lactuca sativa HOM05D003891 ORTHO05D004802 2.8e-11 72.0 49 71.4
Nitab4.5_0001700g0070 Nicotiana tabacum HOM05D003891 ORTHO05D004802 2.8e-11 72.0 49 71.4
MSTRG.19945 Avicennia marina HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 67.3
BcaNung00603 Brassica carinata HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 73.5
Carub.0007s0494 Capsella rubella HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 73.5
Ciclev10028695m.g Citrus clementina HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 71.4
Thhalv10025517m.g Eutrema salsugineum HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 73.5
Hma1.2p1_0271F.1_g108710 Hydrangea macrophylla HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 71.4
Nitab4.5_0005657g0030 Nicotiana tabacum HOM05D003891 ORTHO05D004802 3.6e-11 71.6 70 57.1
Sp7g33150 Schrenkiella parvula HOM05D003891 ORTHO05D004802 3.6e-11 71.6 49 73.5
Aa31LG8G14670 Aethionema arabicum HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 73.5
AT2G17320 Arabidopsis thaliana HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 73.5
CAN.G1645.6 Capsicum annuum HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 67.3
Duzib132G1166 Durio zibethinus HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 73.5
Glyma.20G212400 Glycine max HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 73.5
Glyma.20G212500 Glycine max HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 73.5
TAR628G0887 Trochodendron aralioides HOM05D003891 ORTHO05D004802 4.7e-11 71.2 49 73.5
C01p03550 Brassica napus HOM05D003891 ORTHO05D004802 6.2e-11 70.9 49 71.4
BolC1t00344H Brassica oleracea HOM05D003891 ORTHO05D004802 6.2e-11 70.9 49 71.4
unitig_21.g20520 Utricularia gibba HOM05D003891 ORTHO05D004802 6.2e-11 70.9 49 69.4
vmacro10882 Vaccinium macrocarpon HOM05D003891 ORTHO05D004802 6.2e-11 70.9 49 69.4
AL7G15800 Arabidopsis lyrata HOM05D003891 ORTHO05D004802 8.1e-11 70.5 49 71.4
A01p03200 Brassica napus HOM05D003891 ORTHO05D004802 8.1e-11 70.5 49 71.4
BraA01t00305Z Brassica rapa HOM05D003891 ORTHO05D004802 8.1e-11 70.5 49 71.4
Cfa005391 Carpinus fangiana HOM05D003891 ORTHO05D004802 8.1e-11 70.5 48 72.9
Haze_01964 Corylus avellana HOM05D003891 ORTHO05D004802 8.1e-11 70.5 49 71.4
Medtr1g076720 Medicago truncatula HOM05D003891 ORTHO05D004802 8.1e-11 70.5 47 74.5
Rhsim05G0044600 Rhododendron simsii HOM05D003891 ORTHO05D004802 8.1e-11 70.5 49 67.3
Thecc.02G147300 Theobroma cacao HOM05D003891 ORTHO05D004802 8.1e-11 70.5 49 75.5
BraA06t26341Z Brassica rapa HOM05D003891 ORTHO05D004802 1.1e-10 70.1 49 71.4
COL.COLO4_37644 Corchorus olitorius HOM05D003891 ORTHO05D004802 1.1e-10 70.1 48 75.0
Gohir.D13G057500 Gossypium hirsutum HOM05D003891 ORTHO05D004802 1.1e-10 70.1 49 73.5
Lj2g0023729 Lotus japonicus HOM05D003891 ORTHO05D004802 1.1e-10 70.1 49 69.4
Sp3g30660 Schrenkiella parvula HOM05D003891 ORTHO05D004802 1.1e-10 70.1 49 71.4
AT4G35360 Arabidopsis thaliana HOM05D003891 ORTHO05D004802 1.4e-10 69.7 49 71.4
Duzib052G0081 Durio zibethinus HOM05D003891 ORTHO05D004802 1.4e-10 69.7 48 75.0
Thhalv10022748m.g Eutrema salsugineum HOM05D003891 ORTHO05D004802 1.4e-10 69.7 49 71.4
arahy.Tifrunner.gnm1.ann1.QM8NH2 Arachis hypogaea HOM05D003891 ORTHO05D004802 1.8e-10 69.3 55 61.8
Gohir.A13G064300 Gossypium hirsutum HOM05D003891 ORTHO05D004802 1.8e-10 69.3 49 73.5
BcaC01g02934 Brassica carinata HOM05D003891 ORTHO05D004802 2.4e-10 68.9 49 69.4
A06p34080 Brassica napus HOM05D003891 ORTHO05D004802 2.4e-10 68.9 49 69.4
C03p58170 Brassica napus HOM05D003891 ORTHO05D004802 2.4e-10 68.9 49 69.4
BolC3t18087H Brassica oleracea HOM05D003891 ORTHO05D004802 2.4e-10 68.9 49 69.4
Gorai.013G064800 Gossypium raimondii HOM05D003891 ORTHO05D004802 2.4e-10 68.9 49 73.5
Phvul.007G111800 Phaseolus vulgaris HOM05D003891 ORTHO05D004802 3.1e-10 68.6 49 69.4
HPP92_015472 Vanilla planifolia HOM05D003891 ORTHO05D004802 3.1e-10 68.6 49 67.3
VMungo0720G0968 Vigna mungo HOM05D003891 ORTHO05D004802 3.1e-10 68.6 49 69.4
Aa31LG2G14970 Aethionema arabicum HOM05D003891 ORTHO05D004802 4.0e-10 68.2 49 63.3
PGR042G1041 Punica granatum HOM05D003891 ORTHO05D004802 4.0e-10 68.2 47 72.3
MD16G1233000 Malus domestica HOM05D003891 ORTHO05D004802 5.2e-10 67.8 41 78.0
Nn6g31645 Nelumbo nucifera HOM05D003891 ORTHO05D004802 5.2e-10 67.8 49 69.4
PSO210G7370 Papaver somniferum HOM05D003891 ORTHO05D004802 5.2e-10 67.8 49 67.3
PSO761G0136 Papaver somniferum HOM05D003891 ORTHO05D004802 5.2e-10 67.8 49 67.3
Sed0009963 Sechium edule HOM05D003891 ORTHO05D004802 8.9e-10 67.0 49 69.4
arahy.Tifrunner.gnm1.ann1.94LQT9 Arachis hypogaea HOM05D003891 ORTHO05D004802 1.2e-09 66.6 48 66.7
BcaB08g34723 Brassica carinata HOM05D003891 ORTHO05D004802 1.2e-09 66.6 49 67.3
SalBow1G5213 Salvia bowleyana HOM05D003891 ORTHO05D004802 1.2e-09 66.6 49 65.3
Lj5g0000118 Lotus japonicus HOM05D003891 ORTHO05D004802 1.5e-09 66.2 76 50.0
SHI49653 Sapria himalayana HOM05D000023 ORTHO05D000014 1.5e-09 66.2 48 70.8
SGA_v2.0_scaffold32G13353 Striga asiatica HOM05D003891 ORTHO05D004802 1.5e-09 66.2 49 63.3
Zm00001eb381870 Zea mays HOM05D003891 ORTHO05D004802 2.6e-09 65.5 48 66.7
Os06g0325500 Oryza sativa ssp. japonica HOM05D003891 ORTHO05D004802 3.4e-09 65.1 49 65.3
ATR0605G170 Amborella trichopoda HOM05D003891 ORTHO05D004802 5.8e-09 64.3 47 61.7
MD16G1142900 Malus domestica HOM05D003891 ORTHO05D004802 7.6e-09 63.9 41 73.2
EL10Ac1g01724 Beta vulgaris HOM05D003891 ORTHO05D004802 2.2e-08 62.4 67 56.7
CARHR119570 Cardamine hirsuta HOM05D003891 ORTHO05D031685 3.8e-08 61.6 48 62.5
Mapoly0021s0096 Marchantia polymorpha HOM05D003891 ORTHO05D004802 3.2e-07 58.5 49 53.1
Pp3c16_25870 Physcomitrium patens HOM05D003891 ORTHO05D004802 3.2e-07 58.5 49 53.1
SMO352G0076 Selaginella moellendorffii HOM05D003891 ORTHO05D004802 1.6e-06 56.2 49 57.1
AagrBONN_evm.TU.Sc2ySwM_368.2236 Anthoceros agrestis HOM05D003891 ORTHO05D004802 2.1e-06 55.8 58 50.0


User provided reference genes

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