Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g19706 Beta vulgaris HOM05D001966 ORTHO05D010588 2.7e-94 348.6 171 100.0
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 1.9e-55 219.5 148 77.0
arahy.Tifrunner.gnm1.ann1.FN7561 Arachis hypogaea HOM05D001966 ORTHO05D007227 5.8e-28 128.3 112 68.8
EL10As6g23662 Beta vulgaris HOM05D001325 ORTHO05D001540 1.3e-24 117.1 70 82.9
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 1.8e-24 116.7 139 56.1
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 9.6e-23 110.9 66 83.3
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 2.1e-22 109.8 65 87.7
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.4e-18 97.1 101 59.4
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 1.2e-17 94.0 94 58.5
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 1.6e-17 93.6 132 47.0
LjContig00489g0013211 Lotus japonicus HOM05D001966 ORTHO05D007227 3.9e-16 89.0 101 53.5
arahy.Tifrunner.gnm1.ann1.KZKE62 Arachis hypogaea HOM05D001966 ORTHO05D007227 2.5e-15 86.3 78 66.7
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 8.2e-14 81.3 106 50.9
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 8.2e-14 81.3 106 50.9
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 4.1e-13 79.0 111 48.6
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 4.5e-12 75.5 94 50.0
SalBow1G8704 Salvia bowleyana HOM05D001966 ORTHO05D007227 4.5e-12 75.5 167 37.1
arahy.Tifrunner.gnm1.ann1.3QB7SN Arachis hypogaea HOM05D001966 ORTHO05D007227 5.8e-12 75.1 88 56.8
Sopen06g018470 Solanum pennellii HOM05D001966 ORTHO05D007227 1.0e-11 74.3 42 83.3
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 1.3e-11 73.9 45 77.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.6e-09 67.0 76 56.6
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 4.6e-09 65.5 69 55.1
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 4.6e-09 65.5 69 55.1
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 4.6e-09 65.5 69 55.1
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 4.6e-09 65.5 69 55.1
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 4.6e-09 65.5 69 55.1
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 6.1e-09 65.1 67 55.2
arahy.Tifrunner.gnm1.ann1.JURL6Q Arachis hypogaea HOM05D001966 ORTHO05D007227 1.0e-08 64.3 35 82.9
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 1.8e-08 63.5 58 56.9
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 3.3e-07 59.3 32 87.5
DCAR_004607 Daucus carota HOM05D001244 ORTHO05D001076 7.4e-07 58.2 37 86.5
Gohir.1Z049782 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.8e-06 56.2 102 43.1
Gohir.A04G039285 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.8e-06 56.2 102 43.1
Gohir.A05G323732 Gossypium hirsutum HOM05D001966 ORTHO05D007227 2.8e-06 56.2 102 43.1
BraSC58t46453Z Brassica rapa HOM05D001966 ORTHO05D010588 3.7e-06 55.8 33 78.8
Gohir.A13G086695 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.8e-06 55.5 101 43.6
SGA_v2.0_scaffold893G53700 Striga asiatica HOM05D009726 ORTHO05D010588 4.8e-06 55.5 33 78.8


User provided reference genes

Program Settings