Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g19673 Beta vulgaris HOM05D007598 ORTHO05D009632 4.1e-93 344.7 176 100.0
AUR62030196 Chenopodium quinoa HOM05D007598 ORTHO05D009632 4.2e-21 105.5 71 74.6
AUR62002748 Chenopodium quinoa HOM05D007598 ORTHO05D009632 5.4e-21 105.1 71 74.6
Nitab4.5_0000420g0040 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.1e-20 103.2 68 73.5
CiPaw.10G091200 Carya illinoinensis HOM05D007598 ORTHO05D009632 2.7e-20 102.8 68 69.1
Cc00_g10360 Coffea canephora HOM05D007598 ORTHO05D009632 1.3e-19 100.5 69 72.5
DCAR_027909 Daucus carota HOM05D007598 ORTHO05D009632 1.7e-19 100.1 58 82.8
Ah.14g086510 Amaranthus hybridus HOM05D007598 ORTHO05D009632 1.1e-18 97.4 82 67.1
Lalb_Chr20g0117881 Lupinus albus HOM05D007598 ORTHO05D009632 1.1e-18 97.4 69 69.6
CSS0006536 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.5e-18 97.1 70 72.9
CAN.G702.32 Capsicum annuum HOM05D007598 ORTHO05D009632 1.5e-18 97.1 65 70.8
Actinidia39580 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.9e-18 96.7 66 74.2
Nitab4.5_0006887g0010 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.5e-18 96.3 69 71.0
Rhsim02G0159000 Rhododendron simsii HOM05D007598 ORTHO05D009632 2.5e-18 96.3 87 58.6
Sed0007826 Sechium edule HOM05D007598 ORTHO05D009632 2.5e-18 96.3 72 65.3
PGSC0003DMG400021093 Solanum tuberosum HOM05D007598 ORTHO05D009632 2.5e-18 96.3 65 70.8
Dinv32243 Davidia involucrata HOM05D007598 ORTHO05D009632 4.3e-18 95.5 66 71.2
Aa31LG10G6810 Aethionema arabicum HOM05D007598 ORTHO05D009632 9.6e-18 94.4 74 68.9
Cfa000936 Carpinus fangiana HOM05D007598 ORTHO05D009632 1.3e-17 94.0 64 71.9
MELO3C007128.2 Cucumis melo HOM05D007598 ORTHO05D009632 1.3e-17 94.0 78 64.1
CSS0035986 Camellia sinensis var. sinensis HOM05D007598 ORTHO05D009632 1.6e-17 93.6 71 70.4
Psat1g188680 Pisum sativum HOM05D007598 ORTHO05D009632 1.6e-17 93.6 66 65.2
Glyma.13G218700 Glycine max HOM05D007598 ORTHO05D009632 2.1e-17 93.2 64 73.4
Thecc.06G149600 Theobroma cacao HOM05D007598 ORTHO05D009632 2.1e-17 93.2 66 68.2
ClCG01G024670 Citrullus lanatus HOM05D007598 ORTHO05D009632 4.8e-17 92.0 82 59.8
FvH4_3g05470 Fragaria vesca HOM05D007598 ORTHO05D009632 4.8e-17 92.0 58 75.9
FAN11G3574 Fragaria x ananassa HOM05D007598 ORTHO05D009632 4.8e-17 92.0 58 75.9
Carub.0004s1626 Capsella rubella HOM05D007598 ORTHO05D009632 6.2e-17 91.7 77 62.3
CsaV3_6G051780 Cucumis sativus L. HOM05D007598 ORTHO05D009632 8.1e-17 91.3 78 61.5
Sc05g0006160 Simmondsia chinensis HOM05D007598 ORTHO05D009632 8.1e-17 91.3 64 71.9
HanXRQChr04g0114301 Helianthus annuus HOM05D007598 ORTHO05D009632 1.1e-16 90.9 58 75.9
Phvul.006G165400 Phaseolus vulgaris HOM05D007598 ORTHO05D009632 1.1e-16 90.9 66 68.2
Solyc02g070470.1 Solanum lycopersicum HOM05D007598 ORTHO05D009632 1.1e-16 90.9 70 65.7
Sopen02g019560 Solanum pennellii HOM05D007598 ORTHO05D009632 1.1e-16 90.9 68 64.7
Actinidia07703 Actinidia chinensis HOM05D007598 ORTHO05D009632 1.4e-16 90.5 67 68.7
Aqoxy7G00246 Aquilegia oxysepala HOM05D007598 ORTHO05D009632 1.4e-16 90.5 66 66.7
FAN16G2639 Fragaria x ananassa HOM05D007598 ORTHO05D009632 1.4e-16 90.5 58 75.9
FAN21G2813 Fragaria x ananassa HOM05D007598 ORTHO05D009632 1.4e-16 90.5 58 75.9
Gohir.D10G042400 Gossypium hirsutum HOM05D007598 ORTHO05D009632 1.4e-16 90.5 64 68.8
Manes.17G070801 Manihot esculenta HOM05D007598 ORTHO05D009632 1.4e-16 90.5 61 73.8
Potri.011G084300 Populus trichocarpa HOM05D007598 ORTHO05D009632 1.4e-16 90.5 58 75.9
Medtr2g019240 Medicago truncatula HOM05D007598 ORTHO05D009632 1.8e-16 90.1 61 70.5
arahy.Tifrunner.gnm1.ann1.A3G0A3 Arachis hypogaea HOM05D007598 ORTHO05D009632 2.4e-16 89.7 69 65.2
arahy.Tifrunner.gnm1.ann1.KTXA2U Arachis hypogaea HOM05D007598 ORTHO05D009632 2.4e-16 89.7 69 65.2
HanXRQChr15g0480881 Helianthus annuus HOM05D007598 ORTHO05D009632 2.4e-16 89.7 71 67.6
Lsat_1_v5_gn_7_28481 Lactuca sativa HOM05D007598 ORTHO05D009632 2.4e-16 89.7 72 62.5
CANSAT35G0825 Cannabis sativa HOM05D007598 ORTHO05D009632 3.1e-16 89.4 60 71.7
Ca_00537_v3 Cicer arietinum L. HOM05D007598 ORTHO05D009632 3.1e-16 89.4 58 72.4
FAN25G0892 Fragaria x ananassa HOM05D007598 ORTHO05D009632 5.3e-16 88.6 58 74.1
Sabra11G0066800 Salix brachista HOM05D007598 ORTHO05D009632 5.3e-16 88.6 58 74.1
AT2G34585 Arabidopsis thaliana HOM05D007598 ORTHO05D009632 6.9e-16 88.2 72 61.1
A04p26490 Brassica napus HOM05D007598 ORTHO05D009632 6.9e-16 88.2 67 64.2
C04p63910 Brassica napus HOM05D007598 ORTHO05D009632 6.9e-16 88.2 67 64.2
BolC4t27858H Brassica oleracea HOM05D007598 ORTHO05D009632 6.9e-16 88.2 67 64.2
BraA04t18153Z Brassica rapa HOM05D007598 ORTHO05D009632 6.9e-16 88.2 67 64.2
Prupe.4G081500 Prunus persica HOM05D007598 ORTHO05D009632 6.9e-16 88.2 61 68.9
AL4G30560 Arabidopsis lyrata HOM05D007598 ORTHO05D009632 9.0e-16 87.8 75 61.3
Nn3g20182 Nelumbo nucifera HOM05D007598 ORTHO05D009632 9.0e-16 87.8 64 67.2
Glyma.15G093500 Glycine max HOM05D007598 ORTHO05D009632 1.2e-15 87.4 66 65.2
MBI02_g15148_MAGBIO Magnolia biondii HOM05D007598 ORTHO05D009632 1.5e-15 87.0 58 74.1
ATR1098G093 Amborella trichopoda HOM05D007598 ORTHO05D009632 2.0e-15 86.7 66 62.1
Duzib235G0096 Durio zibethinus HOM05D007598 ORTHO05D009632 2.0e-15 86.7 74 59.5
Migut.M01992 Erythranthe guttata HOM05D007598 ORTHO05D009632 2.0e-15 86.7 62 62.9
QL05p057697 Quercus lobata HOM05D007598 ORTHO05D009632 2.0e-15 86.7 71 64.8
Sp4g16850 Schrenkiella parvula HOM05D007598 ORTHO05D009632 2.0e-15 86.7 50 80.0
BcaB06g28784 Brassica carinata HOM05D007598 ORTHO05D009632 2.6e-15 86.3 50 80.0
MD10G1261400 Malus domestica HOM05D007598 ORTHO05D009632 2.6e-15 86.3 58 69.0
TAR626G0451 Trochodendron aralioides HOM05D007598 ORTHO05D009632 3.4e-15 85.9 57 71.9
Cpa.g.sc170.27 Carica papaya HOM05D007598 ORTHO05D009632 4.5e-15 85.5 68 66.2
Ciclev10017916m.g Citrus clementina HOM05D007598 ORTHO05D009632 4.5e-15 85.5 72 63.9
Migut.M00903 Erythranthe guttata HOM05D007598 ORTHO05D009632 4.5e-15 85.5 62 61.3
MD05G1283100 Malus domestica HOM05D007598 ORTHO05D009632 4.5e-15 85.5 76 57.9
THA.LOC104820651 Tarenaya hassleriana HOM05D007598 ORTHO05D009632 4.5e-15 85.5 84 53.6
CARHR128680 Cardamine hirsuta HOM05D007598 ORTHO05D009632 5.8e-15 85.1 73 60.3
Thhalv10017600m.g Eutrema salsugineum HOM05D007598 ORTHO05D009632 7.6e-15 84.7 61 68.9
PGR042G1521 Punica granatum HOM05D007598 ORTHO05D009632 7.6e-15 84.7 59 69.5
RcHm_v2.0_Chr5g0014281 Rosa chinensis HOM05D007598 ORTHO05D009632 7.6e-15 84.7 60 68.3
Atru.chr10.1775 Acer truncatum HOM05D007598 ORTHO05D009632 9.9e-15 84.3 60 68.3
SalBow8G5536 Salvia bowleyana HOM05D007598 ORTHO05D009632 1.3e-14 84.0 62 66.1
Lj6g0001552 Lotus japonicus HOM05D007598 ORTHO05D009632 1.7e-14 83.6 64 65.6
Nitab4.5_0002744g0030 Nicotiana tabacum HOM05D007598 ORTHO05D009632 2.2e-14 83.2 74 59.5
unitig_749.g13736 Utricularia gibba HOM05D007598 ORTHO05D009632 2.9e-14 82.8 66 65.2
PSO541G2526 Papaver somniferum HOM05D007598 ORTHO05D009632 8.4e-14 81.3 89 53.9
Rhsim13G0114100 Rhododendron simsii HOM05D007598 ORTHO05D009632 4.2e-13 79.0 59 64.4
ECA236G0778 Erigeron canadensis HOM05D007598 ORTHO05D009632 5.4e-13 78.6 46 73.9
COL.COLO4_31062 Corchorus olitorius HOM05D007598 ORTHO05D009632 7.1e-13 78.2 46 76.1
TWI53G0871 Tripterygium wilfordii HOM05D007598 ORTHO05D009632 2.1e-12 76.6 73 53.4
PGSC0003DMG400012092 Solanum tuberosum HOM05D007598 ORTHO05D009632 6.0e-12 75.1 51 68.6
EL10Ac6g13933 Beta vulgaris HOM05D001563 ORTHO05D017178 1.0e-11 74.3 67 62.7
HPP92_000988 Vanilla planifolia HOM05D007598 ORTHO05D009632 3.0e-11 72.8 70 50.0
Os07g0154300 Oryza sativa ssp. japonica HOM05D007598 ORTHO05D009632 1.5e-10 70.5 48 64.6
SEGI_36626 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 3.3e-10 69.3 48 64.6
Zm00001eb117510 Zea mays HOM05D007598 ORTHO05D009632 5.6e-10 68.6 51 62.7
Mapoly0055s0099 Marchantia polymorpha HOM05D007598 ORTHO05D009632 8.1e-09 64.7 48 64.6
Actinidia16706 Actinidia chinensis HOM05D000667 ORTHO05D004096 4.0e-08 62.4 48 66.7
SEGI_00564 Sequoiadendron giganteum HOM05D007598 ORTHO05D009632 7.6e-07 58.2 55 47.3
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 1.7e-06 57.0 36 83.3
EL10Ac6g14918 Beta vulgaris HOM05D001563 ORTHO05D001956 1.7e-06 57.0 102 42.2
Pp3c14_11250 Physcomitrium patens HOM05D007598 ORTHO05D009632 1.7e-06 57.0 80 41.2


User provided reference genes

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