Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g19489 Beta vulgaris HOM05D000535 ORTHO05D000427 1.3e-125 453.0 222 100.0
EL10Ac3g06172 Beta vulgaris HOM05D000535 ORTHO05D000427 9.2e-50 201.1 226 48.2
Hma1.2p1_0807F.1_g221390 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.2e-17 94.4 208 34.1
Nitab4.5_0012105g0010 Nicotiana tabacum HOM05D000535 ORTHO05D000427 6.0e-17 92.0 209 33.5
EL10Ac6g13199 Beta vulgaris HOM05D000535 ORTHO05D000427 1.3e-16 90.9 205 32.2
HanXRQChr16g0527271 Helianthus annuus HOM05D000535 ORTHO05D000427 1.1e-15 87.8 224 31.2
Hma1.2p1_0807F.1_g221420 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 3.3e-15 86.3 210 32.4
PSO063G4340 Papaver somniferum HOM05D000535 ORTHO05D000427 4.3e-15 85.9 216 31.5
CAN.G74.22 Capsicum annuum HOM05D000535 ORTHO05D000427 7.3e-15 85.1 206 33.5
PSO782G5179 Papaver somniferum HOM05D000535 ORTHO05D000427 1.3e-14 84.3 214 32.7
SalBow5G3406 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.6e-14 84.0 185 34.1
DCAR_011686 Daucus carota HOM05D000535 ORTHO05D000427 3.6e-14 82.8 227 33.0
Migut.O00272 Erythranthe guttata HOM05D000535 ORTHO05D000427 4.8e-14 82.4 180 32.2
Ah.03g135100 Amaranthus hybridus HOM05D000535 ORTHO05D000427 6.2e-14 82.0 189 29.6
ClCG01G014760 Citrullus lanatus HOM05D000535 ORTHO05D000427 8.1e-14 81.6 215 33.0
Sc14g0008170 Simmondsia chinensis HOM05D000535 ORTHO05D000427 8.1e-14 81.6 208 31.7
SalBow5G1184 Salvia bowleyana HOM05D000535 ORTHO05D000427 1.8e-13 80.5 206 31.6
CAN.G861.36 Capsicum annuum HOM05D000535 ORTHO05D000427 3.1e-13 79.7 206 31.6
DCAR_023555 Daucus carota HOM05D000535 ORTHO05D000427 4.0e-13 79.3 196 30.6
Lj9C411T7 Lonicera japonica HOM05D000535 ORTHO05D000427 4.0e-13 79.3 204 30.4
MBI06_g27485_MAGBIO Magnolia biondii HOM05D000535 ORTHO05D000427 5.3e-13 79.0 178 30.9
Hma1.2p1_0807F.1_g221410 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 6.9e-13 78.6 179 34.6
Solyc04g150105.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 6.9e-13 78.6 206 32.0
Nitab4.5_0003884g0060 Nicotiana tabacum HOM05D000535 ORTHO05D000427 9.0e-13 78.2 176 33.0
Oeu032705.1 Olea europaea HOM05D000535 ORTHO05D000427 9.0e-13 78.2 210 29.0
GSVIVG01012920001 Vitis vinifera HOM05D000535 ORTHO05D000427 1.5e-12 77.4 190 31.1
DCAR_026808 Daucus carota HOM05D000535 ORTHO05D000427 2.0e-12 77.0 192 31.2
Cc10_g11700 Coffea canephora HOM05D000535 ORTHO05D000427 2.6e-12 76.6 195 32.3
PGSC0003DMG400029534 Solanum tuberosum HOM05D000535 ORTHO05D000427 2.6e-12 76.6 208 33.7
EL10Ac9g20937 Beta vulgaris HOM05D000535 ORTHO05D000427 4.5e-12 75.9 179 30.7
AUR62028778 Chenopodium quinoa HOM05D000535 ORTHO05D000427 4.5e-12 75.9 220 30.9
FAN13G1742 Fragaria x ananassa HOM05D000535 ORTHO05D000427 4.5e-12 75.9 169 32.0
PGSC0003DMG400015219 Solanum tuberosum HOM05D000535 ORTHO05D000427 4.5e-12 75.9 206 31.6
Duzib268G0452 Durio zibethinus HOM05D000535 ORTHO05D000427 5.8e-12 75.5 198 29.8
Ah.03g132920 Amaranthus hybridus HOM05D000535 ORTHO05D000427 9.9e-12 74.7 185 29.7
CSS0030185 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 9.9e-12 74.7 184 32.6
GSVIVG01012936001 Vitis vinifera HOM05D000535 ORTHO05D000427 1.3e-11 74.3 201 31.8
Dinv08278 Davidia involucrata HOM05D000535 ORTHO05D000427 1.7e-11 73.9 210 29.5
Duzib268G1310 Durio zibethinus HOM05D000535 ORTHO05D000427 1.7e-11 73.9 168 32.7
Duzib268G0986 Durio zibethinus HOM05D000535 ORTHO05D000427 2.2e-11 73.6 198 29.8
SalBow5G3210 Salvia bowleyana HOM05D000535 ORTHO05D000427 2.2e-11 73.6 208 30.3
Sopen03g029620 Solanum pennellii HOM05D000535 ORTHO05D000427 2.2e-11 73.6 206 30.1
AUR62005428 Chenopodium quinoa HOM05D000535 ORTHO05D000427 3.8e-11 72.8 159 34.6
DCAR_011412 Daucus carota HOM05D000535 ORTHO05D000427 3.8e-11 72.8 228 32.5
Lj2P607T10 Lonicera japonica HOM05D000535 ORTHO05D000427 3.8e-11 72.8 207 30.4
DCAR_011411 Daucus carota HOM05D000535 ORTHO05D000427 6.4e-11 72.0 219 31.5
GSVIVG01012922001 Vitis vinifera HOM05D000535 ORTHO05D000427 6.4e-11 72.0 201 31.8
Solyc03g020010.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 8.4e-11 71.6 206 29.6
CAN.G929.13 Capsicum annuum HOM05D000535 ORTHO05D000427 1.1e-10 71.2 200 26.0
CAN.G929.15 Capsicum annuum HOM05D000535 ORTHO05D000427 1.1e-10 71.2 204 27.9
SalBow3G2587 Salvia bowleyana HOM05D000535 ORTHO05D000427 2.4e-10 70.1 199 29.6
Solyc06g072220.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 2.4e-10 70.1 208 25.5
Gohir.D09G052700 Gossypium hirsutum HOM05D000535 ORTHO05D000427 3.2e-10 69.7 159 31.4
CSS0038674 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 4.2e-10 69.3 171 32.2
CAN.G929.14 Capsicum annuum HOM05D000535 ORTHO05D000427 4.2e-10 69.3 202 27.2
Cc00_g04330 Coffea canephora HOM05D000535 ORTHO05D000427 7.1e-10 68.6 195 30.3
Duzib268G1756 Durio zibethinus HOM05D000535 ORTHO05D000427 7.1e-10 68.6 168 29.8
EL10Ac3g06705 Beta vulgaris HOM05D009425 ORTHO05D000427 9.3e-10 68.2 214 27.6
CAN.G65.72 Capsicum annuum HOM05D000535 ORTHO05D000427 1.2e-09 67.8 204 27.5
CAN.G65.71 Capsicum annuum HOM05D000535 ORTHO05D000427 1.6e-09 67.4 188 26.6
Gohir.A09G051800 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.6e-09 67.4 184 28.8
Solyc06g072230.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 1.6e-09 67.4 187 27.8
Cc00_g30520 Coffea canephora HOM05D000535 ORTHO05D000427 2.1e-09 67.0 195 30.3
PGSC0003DMG400027052 Solanum tuberosum HOM05D000535 ORTHO05D000427 2.1e-09 67.0 180 28.3
MSTRG.11530 Avicennia marina HOM05D000535 ORTHO05D000427 2.7e-09 66.6 176 32.4
Duzib268G0791 Durio zibethinus HOM05D000535 ORTHO05D000427 2.7e-09 66.6 168 32.1
Ah.02g122230 Amaranthus hybridus HOM05D009425 ORTHO05D000427 3.5e-09 66.2 170 34.1
CSS0003160 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 3.5e-09 66.2 185 30.8
Duzib205G0258 Durio zibethinus HOM05D000535 ORTHO05D000427 3.5e-09 66.2 191 28.8
Thecc.03G051600 Theobroma cacao HOM05D000535 ORTHO05D000427 3.5e-09 66.2 168 31.5
Thecc.03G051900 Theobroma cacao HOM05D000535 ORTHO05D000427 6.0e-09 65.5 168 31.5
Sopen06g028540 Solanum pennellii HOM05D000535 ORTHO05D000427 7.9e-09 65.1 211 25.6
PSO017G0167 Papaver somniferum HOM05D000535 ORTHO05D000427 1.0e-08 64.7 201 27.9
Sopen06g028550 Solanum pennellii HOM05D000535 ORTHO05D000427 1.0e-08 64.7 212 26.9
THA.LOC104812195 Tarenaya hassleriana HOM05D000535 ORTHO05D000427 1.0e-08 64.7 198 29.8
Gohir.A05G392100 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.3e-08 64.3 190 31.1
Gohir.D04G025000 Gossypium hirsutum HOM05D000535 ORTHO05D000427 1.3e-08 64.3 190 31.6
Gorai.012G027600 Gossypium raimondii HOM05D000535 ORTHO05D000427 1.3e-08 64.3 190 31.6
PSO170G2432 Papaver somniferum HOM05D000535 ORTHO05D000427 1.3e-08 64.3 177 27.7
PGSC0003DMG400010170 Solanum tuberosum HOM05D000535 ORTHO05D011982 1.3e-08 64.3 211 27.5
MBI03_g13457_MAGBIO Magnolia biondii HOM05D000535 ORTHO05D000427 1.8e-08 63.9 172 30.8
Hma1.2p1_0989F.1_g244860 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 2.3e-08 63.5 207 30.0
Potri.004G067900 Populus trichocarpa HOM05D000535 ORTHO05D000427 3.9e-08 62.8 209 29.7
EL10Ac3g06697 Beta vulgaris HOM05D009425 ORTHO05D000427 5.1e-08 62.4 135 32.6
Nn5g28809 Nelumbo nucifera HOM05D000535 ORTHO05D000427 5.1e-08 62.4 206 28.6
arahy.Tifrunner.gnm1.ann1.95ACYI Arachis hypogaea HOM05D000535 ORTHO05D000427 6.7e-08 62.0 188 28.7
Lsat_1_v5_gn_2_112140 Lactuca sativa HOM05D000535 ORTHO05D000427 6.7e-08 62.0 204 29.4
Lsat_1_v5_gn_4_23340 Lactuca sativa HOM05D000535 ORTHO05D000427 6.7e-08 62.0 137 35.8
Potri.017G153200 Populus trichocarpa HOM05D000535 ORTHO05D000427 6.7e-08 62.0 215 29.3
HanXRQChr06g0165061 Helianthus annuus HOM05D000535 ORTHO05D000427 8.7e-08 61.6 220 27.7
Nn3g18117 Nelumbo nucifera HOM05D000535 ORTHO05D000427 1.5e-07 60.8 228 25.9
Hma1.2p1_1656F.1_g296030 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 1.9e-07 60.5 223 27.8
Nn3g18575 Nelumbo nucifera HOM05D000535 ORTHO05D000427 3.3e-07 59.7 231 27.3
EL10Ac3g06647 Beta vulgaris HOM05D009425 ORTHO05D000427 4.3e-07 59.3 169 27.2
Thecc.03G051800 Theobroma cacao HOM05D000535 ORTHO05D000427 4.3e-07 59.3 213 29.1
Carub.0001s1759 Capsella rubella HOM05D000535 ORTHO05D000427 5.6e-07 58.9 194 25.8
Sabra04G0045500 Salix brachista HOM05D000535 ORTHO05D000427 7.4e-07 58.5 144 33.3
CAN.G929.8 Capsicum annuum HOM05D000535 ORTHO05D011982 9.6e-07 58.2 222 23.9
AL1G30220 Arabidopsis lyrata HOM05D000535 ORTHO05D000427 2.1e-06 57.0 202 26.2
BcaB03g15046 Brassica carinata HOM05D000535 ORTHO05D000427 2.1e-06 57.0 212 27.8
Nn3g18118 Nelumbo nucifera HOM05D000535 ORTHO05D000427 2.1e-06 57.0 198 25.8
BraA07t31473Z Brassica rapa HOM05D000535 ORTHO05D000427 3.6e-06 56.2 217 29.0
PGR142G1324 Punica granatum HOM05D000535 ORTHO05D000427 4.8e-06 55.8 186 28.5


User provided reference genes

Program Settings