Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 0.0e+00 1411.4 717 100.0
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 0.0e+00 1194.1 717 85.4
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 2.8e-310 1068.1 744 74.5
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.3e-299 1032.7 717 75.2
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 3.9e-283 978.0 726 70.0
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 3.9e-283 978.0 726 70.0
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 6.2e-281 970.7 713 70.3
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 8.9e-280 966.8 682 73.6
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.2e-279 966.5 718 69.9
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 3.5e-276 954.9 704 69.6
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 5.1e-275 951.0 682 71.6
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 1.5e-274 949.5 686 70.7
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 2.1e-273 945.7 679 71.7
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 4.4e-271 937.9 679 70.8
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 2.9e-270 935.3 727 66.6
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 3.8e-270 934.9 717 68.6
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 2.4e-269 932.2 688 69.8
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 5.4e-269 931.0 698 68.9
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 1.6e-268 929.5 692 69.9
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 2.1e-268 929.1 681 69.8
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 3.5e-268 928.3 727 66.7
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 4.6e-268 927.9 684 69.3
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 1.0e-267 926.8 677 69.9
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.7e-267 926.0 763 64.0
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.3e-267 925.6 681 68.4
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.3e-267 925.6 684 69.2
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 3.9e-267 924.9 676 69.2
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 8.7e-267 923.7 716 67.2
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.1e-266 923.3 698 69.2
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.5e-266 922.2 732 64.8
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 3.3e-266 921.8 674 71.5
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 3.3e-266 921.8 722 67.2
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 3.3e-266 921.8 695 68.1
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.1e-265 919.1 674 69.3
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 3.6e-265 918.3 685 68.3
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 8.1e-265 917.1 690 69.0
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 1.8e-264 916.0 684 68.6
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 2.4e-264 915.6 715 67.1
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 3.1e-264 915.2 693 67.7
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 1.2e-263 913.3 678 68.7
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 2.0e-263 912.5 714 67.4
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 2.0e-263 912.5 701 67.9
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 3.4e-263 911.8 749 64.6
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 1.7e-262 909.4 680 68.5
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 1.7e-262 909.4 732 65.2
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 6.4e-262 907.5 715 67.6
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 8.4e-262 907.1 707 67.3
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 2.1e-260 902.5 684 67.8
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 2.1e-260 902.5 711 66.5
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 2.7e-260 902.1 711 66.4
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.5e-260 901.7 711 66.7
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 4.6e-260 901.4 676 68.3
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 1.0e-259 900.2 685 67.6
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 1.7e-259 899.4 712 65.9
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 8.7e-259 897.1 723 65.0
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 8.7e-259 897.1 694 67.7
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 8.7e-259 897.1 722 66.2
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 1.5e-258 896.3 680 68.1
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 3.3e-258 895.2 685 67.6
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 4.3e-258 894.8 698 66.2
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 7.3e-258 894.0 713 65.9
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 1.3e-257 893.3 709 66.1
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 1.3e-257 893.3 685 67.0
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 2.1e-257 892.5 709 66.1
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 5.3e-256 887.9 699 66.2
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 2.4e-253 879.0 732 64.9
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 6.0e-252 874.4 684 65.9
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 7.9e-252 874.0 706 64.9
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 1.0e-251 873.6 693 65.2
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.0e-251 873.6 763 62.3
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 3.0e-251 872.1 718 64.3
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 3.9e-251 871.7 716 64.8
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 6.7e-251 870.9 688 65.8
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 8.7e-251 870.5 708 65.4
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 1.4e-248 863.2 626 72.5
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 5.5e-245 851.3 747 60.5
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 1.3e-243 846.7 690 63.9
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 2.8e-241 839.0 688 64.1
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 3.1e-240 835.5 634 68.8
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.2e-239 833.6 615 69.3
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.2e-236 823.5 685 64.1
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 6.7e-235 817.8 721 62.1
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 3.3e-234 815.5 653 63.9
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 2.8e-233 812.4 608 67.9
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 3.1e-232 808.9 714 63.0
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 1.1e-226 790.4 598 67.9
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 3.7e-217 758.8 642 62.0
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 8.2e-217 757.7 586 67.2
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 3.6e-212 742.3 598 64.7
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 1.4e-211 740.3 599 66.1
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 5.4e-192 675.2 1251 37.0
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 4.5e-183 645.6 635 55.0
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 4.7e-180 635.6 632 55.1
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.8e-179 633.6 625 54.2
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 3.1e-179 632.9 668 51.6
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 2.7e-175 619.8 441 71.7
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 3.3e-157 559.7 413 69.5
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 9.5e-157 558.1 428 68.9
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 1.9e-144 517.3 414 63.0
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.6e-135 487.6 311 80.4
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 1.5e-133 481.1 737 41.7
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 2.2e-129 467.2 623 44.9
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 1.0e-126 458.4 487 50.5
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 4.2e-120 436.4 345 64.9
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 6.7e-102 375.9 286 66.4
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 5.0e-97 359.8 314 63.1
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.3e-92 345.1 216 84.3
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 1.7e-92 344.7 238 74.8
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 3.1e-91 340.5 468 46.2
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 1.6e-82 311.6 294 59.9
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 1.4e-78 298.5 267 61.0
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 7.5e-77 292.7 216 69.9
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 6.6e-73 279.6 628 34.1
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 4.9e-60 236.9 155 74.8
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 6.8e-46 189.9 157 62.4
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 2.6e-45 188.0 144 66.0
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 1.7e-36 158.7 216 48.6
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 8.7e-33 146.4 109 67.9
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 2.6e-29 134.8 97 68.0
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 9.3e-27 126.3 163 46.0
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 6.6e-25 120.2 143 55.9
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 3.1e-22 111.3 110 47.3
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 4.0e-22 110.9 131 51.9
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 6.7e-17 93.6 51 82.4
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 1.8e-14 85.5 68 63.2
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.6e-10 72.4 68 54.4


User provided reference genes

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