Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac8g18510 Beta vulgaris HOM05D003277 ORTHO05D003275 3.5e-69 265.0 150 100.0
AUR62011006 Chenopodium quinoa HOM05D000030 ORTHO05D000009 9.3e-30 134.0 145 55.2
COL.COLO4_30383 Corchorus olitorius HOM05D003277 ORTHO05D003275 2.1e-13 79.7 124 45.2
Gorai.009G133500 Gossypium raimondii HOM05D003277 ORTHO05D003275 4.6e-13 78.6 123 44.7
Gohir.D05G129700 Gossypium hirsutum HOM05D003277 ORTHO05D003275 6.1e-13 78.2 123 44.7
Gohir.A05G130300 Gossypium hirsutum HOM05D003277 ORTHO05D003275 1.4e-12 77.0 123 43.9
Duzib235G0396 Durio zibethinus HOM05D003277 ORTHO05D003275 2.3e-12 76.3 114 47.4
Thecc.06G088500 Theobroma cacao HOM05D003277 ORTHO05D003275 5.1e-12 75.1 64 67.2
Dinv36618 Davidia involucrata HOM05D003277 ORTHO05D003275 5.7e-11 71.6 137 40.1
Hma1.2p1_0018F.1_g013430 Hydrangea macrophylla HOM05D003277 ORTHO05D003275 5.7e-11 71.6 114 45.6
Prupe.3G070700 Prunus persica HOM05D003277 ORTHO05D003275 9.7e-11 70.9 73 53.4
Manes.04G123700 Manihot esculenta HOM05D003277 ORTHO05D003275 6.3e-10 68.2 64 59.4
Atru.chr1.3275 Acer truncatum HOM05D003277 ORTHO05D003275 1.4e-09 67.0 65 58.5
arahy.Tifrunner.gnm1.ann1.R7R2S9 Arachis hypogaea HOM05D003277 ORTHO05D003275 1.4e-09 67.0 107 41.1
Ciclev10026796m.g Citrus clementina HOM05D003277 ORTHO05D003275 5.3e-09 65.1 64 59.4
vmacro20693 Vaccinium macrocarpon HOM05D010253 ORTHO05D015231 6.9e-09 64.7 68 54.4
QL02p085574 Quercus lobata HOM05D003277 ORTHO05D003275 1.2e-08 63.9 114 40.4
Manes.11G047000 Manihot esculenta HOM05D003277 ORTHO05D003275 1.5e-08 63.5 120 40.0
MD17G1194700 Malus domestica HOM05D003277 ORTHO05D003275 3.4e-08 62.4 60 55.0
Sc08g0007380 Simmondsia chinensis HOM05D003277 ORTHO05D003275 5.9e-08 61.6 156 35.3
Sc18g0001140 Simmondsia chinensis HOM05D003277 ORTHO05D003275 5.9e-08 61.6 150 32.7
Actinidia32754 Actinidia chinensis HOM05D003277 ORTHO05D003275 1.7e-07 60.1 64 57.8
DCAR_010449 Daucus carota HOM05D003277 ORTHO05D003275 1.7e-07 60.1 62 50.0
Duzib150G0682 Durio zibethinus HOM05D003277 ORTHO05D003275 1.7e-07 60.1 121 38.0
Prupe.7G229300 Prunus persica HOM05D003277 ORTHO05D003275 1.7e-07 60.1 116 40.5
CANSAT56G1808 Cannabis sativa HOM05D003277 ORTHO05D003275 2.9e-07 59.3 65 53.8
Sabra01G0146300 Salix brachista HOM05D003277 ORTHO05D003275 3.8e-07 58.9 59 59.3
Medtr8g083490 Medicago truncatula HOM05D003277 ORTHO05D003275 5.0e-07 58.5 115 37.4
COL.COLO4_34902 Corchorus olitorius HOM05D003277 ORTHO05D003275 6.5e-07 58.2 124 35.5
Nn2g11767 Nelumbo nucifera HOM05D003277 ORTHO05D003275 8.5e-07 57.8 114 36.8
Peaxi162Scf00546g00117 Petunia axillaris HOM05D003277 ORTHO05D003275 8.5e-07 57.8 101 38.6
Sopen06g025000 Solanum pennellii HOM05D003277 ORTHO05D003275 8.5e-07 57.8 62 53.2
Gorai.001G004600 Gossypium raimondii HOM05D003277 ORTHO05D003275 1.1e-06 57.4 115 34.8
vmacro18910 Vaccinium macrocarpon HOM05D003277 ORTHO05D003275 1.1e-06 57.4 68 50.0
Haze_16418 Corylus avellana HOM05D003277 ORTHO05D003275 1.4e-06 57.0 67 46.3
MELO3C029688.2 Cucumis melo HOM05D003277 ORTHO05D003275 1.4e-06 57.0 59 55.9
Glyma.07G087300 Glycine max HOM05D003277 ORTHO05D003275 1.4e-06 57.0 84 46.4
Potri.001G180500 Populus trichocarpa HOM05D003277 ORTHO05D003275 1.4e-06 57.0 64 53.1
RhsimUnG0085500 Rhododendron simsii HOM05D003277 ORTHO05D003275 1.4e-06 57.0 113 38.9
Thecc.09G112200 Theobroma cacao HOM05D003277 ORTHO05D003275 1.9e-06 56.6 112 41.1
Haze_16415 Corylus avellana HOM05D003277 ORTHO05D003275 2.5e-06 56.2 67 46.3
Gohir.A07G006900 Gossypium hirsutum HOM05D003277 ORTHO05D003275 2.5e-06 56.2 60 50.0
Nn8g39213 Nelumbo nucifera HOM05D003277 ORTHO05D003275 2.5e-06 56.2 116 37.1
ATR1120G160 Amborella trichopoda HOM05D003277 ORTHO05D003275 3.2e-06 55.8 65 52.3
QL05p023505 Quercus lobata HOM05D003277 ORTHO05D003275 3.2e-06 55.8 60 51.7
CSS0031837 Camellia sinensis var. sinensis HOM05D003277 ORTHO05D003275 4.2e-06 55.5 76 42.1
CAN.G395.13 Capsicum annuum HOM05D003277 ORTHO05D003275 4.2e-06 55.5 66 48.5
Potri.003G055100 Populus trichocarpa HOM05D003277 ORTHO05D003275 4.2e-06 55.5 64 51.6
RcHm_v2.0_Chr6g0305601 Rosa chinensis HOM05D003277 ORTHO05D003275 4.2e-06 55.5 65 49.2
PGSC0003DMG400016508 Solanum tuberosum HOM05D003277 ORTHO05D003275 4.2e-06 55.5 62 53.2
ATR1120G013 Amborella trichopoda HOM05D003277 ORTHO05D003275 5.5e-06 55.1 65 52.3
Cfa002072 Carpinus fangiana HOM05D003277 ORTHO05D003275 5.5e-06 55.1 71 45.1
Haze_25704 Corylus avellana HOM05D000750 ORTHO05D000714 5.5e-06 55.1 107 41.1
DCAR_021143 Daucus carota HOM05D003277 ORTHO05D003275 7.2e-06 54.7 62 53.2
Gohir.D07G005000 Gossypium hirsutum HOM05D003277 ORTHO05D003275 7.2e-06 54.7 60 48.3
Nitab4.5_0003537g0060 Nicotiana tabacum HOM05D003277 ORTHO05D003275 7.2e-06 54.7 108 35.2
ATR1120G137 Amborella trichopoda HOM05D003277 ORTHO05D003275 9.4e-06 54.3 64 51.6
ATR1120G144 Amborella trichopoda HOM05D003277 ORTHO05D003275 9.4e-06 54.3 64 51.6


User provided reference genes

Program Settings