Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g17611 Beta vulgaris HOM05D007766 ORTHO05D009733 2.2e-134 482.3 241 100.0
Ah.15g092870 Amaranthus hybridus HOM05D007766 ORTHO05D009733 1.2e-76 290.4 241 63.5
Sc17g0002970 Simmondsia chinensis HOM05D007766 ORTHO05D009733 7.6e-42 174.9 260 42.7
Peaxi162Scf00001g00292 Petunia axillaris HOM05D007766 ORTHO05D009733 9.7e-37 157.9 205 45.9
SGA_v2.0_scaffold334G49048 Striga asiatica HOM05D007766 ORTHO05D009733 1.3e-36 157.5 205 47.3
Dinv33093 Davidia involucrata HOM05D007766 ORTHO05D009733 1.6e-36 157.1 211 46.0
AUR62008743 Chenopodium quinoa HOM05D007766 ORTHO05D009733 8.2e-36 154.8 198 47.0
Actinidia27601 Actinidia chinensis HOM05D007766 ORTHO05D009733 1.1e-35 154.5 205 44.9
Nitab4.5_0000803g0050 Nicotiana tabacum HOM05D007766 ORTHO05D009733 1.4e-35 154.1 209 44.5
Nitab4.5_0000116g0120 Nicotiana tabacum HOM05D007766 ORTHO05D009733 2.4e-35 153.3 207 44.9
PGSC0003DMG400031827 Solanum tuberosum HOM05D007766 ORTHO05D009733 1.2e-34 151.0 208 44.7
Cc01_g21240 Coffea canephora HOM05D007766 ORTHO05D009733 2.0e-34 150.2 259 42.5
Sopen09g030400 Solanum pennellii HOM05D007766 ORTHO05D009733 4.5e-34 149.1 205 44.9
Migut.D00109 Erythranthe guttata HOM05D007766 ORTHO05D009733 1.3e-33 147.5 210 42.9
PGR119G1997 Punica granatum HOM05D007766 ORTHO05D009733 1.6e-31 140.6 219 40.6
GSVIVG01028075001 Vitis vinifera HOM05D007766 ORTHO05D009733 1.6e-31 140.6 215 42.3
arahy.Tifrunner.gnm1.ann1.MEA9U7 Arachis hypogaea HOM05D007766 ORTHO05D009733 3.6e-31 139.4 193 43.0
Eucgr.H01072 Eucalyptus grandis HOM05D007766 ORTHO05D009733 3.6e-31 139.4 230 40.0
BraA10t42417Z Brassica rapa HOM05D000768 ORTHO05D000665 7.9e-31 138.3 257 41.2
AT1G02700 Arabidopsis thaliana HOM05D007766 ORTHO05D009733 1.0e-30 137.9 263 38.8
Carub.0001s0178 Capsella rubella HOM05D007766 ORTHO05D009733 1.0e-30 137.9 206 43.7
ClCG09G005330 Citrullus lanatus HOM05D007766 ORTHO05D009733 1.0e-30 137.9 195 45.1
Ca_09199_v3 Cicer arietinum L. HOM05D007766 ORTHO05D009733 3.9e-30 136.0 203 43.8
arahy.Tifrunner.gnm1.ann1.28FBJ8 Arachis hypogaea HOM05D007766 ORTHO05D009733 5.1e-30 135.6 203 40.4
C05p01390 Brassica napus HOM05D000768 ORTHO05D000665 5.1e-30 135.6 261 41.0
BolC5t28921H Brassica oleracea HOM05D000768 ORTHO05D000665 5.1e-30 135.6 257 40.9
CANSAT25G3789 Cannabis sativa HOM05D007766 ORTHO05D009733 6.7e-30 135.2 207 43.0
Medtr7g109280 Medicago truncatula HOM05D007766 ORTHO05D009733 6.7e-30 135.2 206 45.1
AL1G12070 Arabidopsis lyrata HOM05D007766 ORTHO05D009733 1.1e-29 134.4 265 37.0
CARHR002000 Cardamine hirsuta HOM05D007766 ORTHO05D009733 1.1e-29 134.4 206 41.3
Glyma.19G214500 Glycine max HOM05D007766 ORTHO05D009733 1.1e-29 134.4 199 42.7
CSS0041323 Camellia sinensis var. sinensis HOM05D007766 ORTHO05D009733 2.6e-29 133.3 233 39.5
VMungo1383G0118 Vigna mungo HOM05D007766 ORTHO05D009733 3.3e-29 132.9 197 44.2
Aa31LG1G9860 Aethionema arabicum HOM05D007766 ORTHO05D009733 7.4e-29 131.7 216 40.7
Manes.05G001200 Manihot esculenta HOM05D007766 ORTHO05D009733 7.4e-29 131.7 221 42.5
Psat3g020680 Pisum sativum HOM05D007766 ORTHO05D009733 9.7e-29 131.3 200 45.5
COL.COLO4_23278 Corchorus olitorius HOM05D007766 ORTHO05D009733 1.3e-28 131.0 213 43.2
Haze_04998 Corylus avellana HOM05D007766 ORTHO05D009733 1.7e-28 130.6 221 38.5
Lj1C21T2 Lonicera japonica HOM05D007766 ORTHO05D009733 1.7e-28 130.6 210 41.9
Gohir.D12G131000 Gossypium hirsutum HOM05D007766 ORTHO05D009733 2.2e-28 130.2 208 41.3
vmacro02422 Vaccinium macrocarpon HOM05D007766 ORTHO05D009733 2.2e-28 130.2 212 43.9
TWI36G1235 Tripterygium wilfordii HOM05D007766 ORTHO05D009733 2.8e-28 129.8 208 41.3
CsaV3_7G029750 Cucumis sativus L. HOM05D007766 ORTHO05D009733 3.7e-28 129.4 196 42.9
Gohir.A12G127500 Gossypium hirsutum HOM05D007766 ORTHO05D009733 3.7e-28 129.4 206 41.3
Nn3g21607 Nelumbo nucifera HOM05D007766 ORTHO05D009733 3.7e-28 129.4 216 40.3
Phvul.001G211300 Phaseolus vulgaris HOM05D007766 ORTHO05D009733 3.7e-28 129.4 197 43.1
Thecc.01G308600 Theobroma cacao HOM05D007766 ORTHO05D009733 3.7e-28 129.4 213 39.4
Thhalv10008633m.g Eutrema salsugineum HOM05D007766 ORTHO05D009733 8.2e-28 128.3 256 37.9
DCAR_002867 Daucus carota HOM05D007766 ORTHO05D009733 1.1e-27 127.9 210 41.4
Gorai.008G142300 Gossypium raimondii HOM05D007766 ORTHO05D009733 1.4e-27 127.5 208 40.9
Rhsim13G0007300 Rhododendron simsii HOM05D007766 ORTHO05D009733 2.4e-27 126.7 194 42.3
ECA248G3735 Erigeron canadensis HOM05D007766 ORTHO05D009733 3.1e-27 126.3 186 41.4
TPR.G20299 Trifolium pratense HOM05D007766 ORTHO05D009733 3.1e-27 126.3 201 42.8
Lj1g0002879 Lotus japonicus HOM05D007766 ORTHO05D009733 4.1e-27 125.9 223 39.5
Potri.014G124500 Populus trichocarpa HOM05D007766 ORTHO05D009733 2.6e-26 123.2 220 39.1
Sp1g01680 Schrenkiella parvula HOM05D007766 ORTHO05D009733 2.6e-26 123.2 253 38.7
Sabra14G0092600 Salix brachista HOM05D007766 ORTHO05D009733 3.4e-26 122.9 221 40.3
Lalb_Chr15g0078421 Lupinus albus HOM05D007766 ORTHO05D009733 4.5e-26 122.5 149 47.7
QL12p028831 Quercus lobata HOM05D007766 ORTHO05D009733 4.5e-26 122.5 271 34.7
CiPaw.07G114200 Carya illinoinensis HOM05D007766 ORTHO05D009733 1.3e-25 120.9 224 39.3
Prupe.8G268800 Prunus persica HOM05D007766 ORTHO05D009733 2.2e-25 120.2 245 35.9
RcHm_v2.0_Chr7g0241981 Rosa chinensis HOM05D007766 ORTHO05D009733 2.9e-25 119.8 228 39.5
Duzib138G0131 Durio zibethinus HOM05D007766 ORTHO05D009733 1.9e-24 117.1 214 36.9
unitig_60.g25659 Utricularia gibba HOM05D001839 ORTHO05D001867 5.5e-24 115.5 96 59.4
HanXRQChr01g0000891 Helianthus annuus HOM05D007766 ORTHO05D009733 7.2e-24 115.2 180 38.9
Atru.chr5.1065 Acer truncatum HOM05D007766 ORTHO05D009733 1.6e-23 114.0 218 39.4
MELO3C015946.2 Cucumis melo HOM05D007766 ORTHO05D009733 1.6e-23 114.0 221 38.0
Ciclev10024028m.g Citrus clementina HOM05D007766 ORTHO05D009733 2.1e-23 113.6 143 46.9
FAN18G0466 Fragaria x ananassa HOM05D007766 ORTHO05D009733 2.1e-23 113.6 222 37.4
FAN18G1064 Fragaria x ananassa HOM05D007766 ORTHO05D009733 2.1e-23 113.6 222 37.4
Cpa.g.sc151.50 Carica papaya HOM05D007766 ORTHO05D009733 2.7e-23 113.2 228 36.8
Lsat_1_v5_gn_5_190141 Lactuca sativa HOM05D007766 ORTHO05D009733 6.1e-23 112.1 181 39.2
Sed0007654 Sechium edule HOM05D007766 ORTHO05D009733 7.9e-23 111.7 205 40.5
FAN08G1563 Fragaria x ananassa HOM05D007766 ORTHO05D009733 6.7e-22 108.6 211 37.4
MD03G1298400 Malus domestica HOM05D007766 ORTHO05D009733 8.8e-22 108.2 238 34.9
FvH4_5g39680 Fragaria vesca HOM05D007766 ORTHO05D009733 1.1e-21 107.8 211 37.4
Solyc09g075600.3 Solanum lycopersicum HOM05D007766 ORTHO05D009733 1.5e-21 107.5 80 62.5
TAR636G1646 Trochodendron aralioides HOM05D007766 ORTHO05D009733 7.4e-21 105.1 91 54.9
A10p01420 Brassica napus HOM05D000768 ORTHO05D000665 3.7e-20 102.8 223 39.9
Aqoxy2G02831 Aquilegia oxysepala HOM05D007766 ORTHO05D009733 6.3e-20 102.1 218 36.2
Cfa005851 Carpinus fangiana HOM05D007766 ORTHO05D009733 1.4e-19 100.9 224 35.3
MBI18_g25084_MAGBIO Magnolia biondii HOM05D007766 ORTHO05D009733 2.6e-18 96.7 215 33.5
PSO478G3523 Papaver somniferum HOM05D007766 ORTHO05D009733 2.9e-17 93.2 208 36.1
PSO782G1382 Papaver somniferum HOM05D007766 ORTHO05D009733 5.0e-17 92.4 207 35.7
CDE05G0244 Ceratophyllum demersum HOM05D007766 ORTHO05D009733 8.8e-14 81.6 134 36.6
Zm00001eb330520 Zea mays HOM05D007766 ORTHO05D009733 1.0e-09 68.2 210 31.9
Sc17g0002980 Simmondsia chinensis HOM05D007766 ORTHO05D009733 5.5e-08 62.4 52 65.4
Actinidia21421 Actinidia chinensis HOM05D007766 ORTHO05D009733 6.1e-07 58.9 113 40.7


User provided reference genes

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