Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 1.6e-166 589.3 303 100.0
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 2.1e-121 439.5 301 74.1
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 1.7e-99 366.7 308 60.1
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 9.8e-95 350.9 317 58.4
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 7.0e-93 344.7 309 57.6
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 3.5e-92 342.4 308 57.8
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.1e-90 337.4 306 56.9
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 9.5e-90 334.3 303 59.4
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.2e-89 334.0 309 57.6
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 1.6e-89 333.6 312 56.1
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 1.6e-89 333.6 306 58.2
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 3.6e-89 332.4 307 55.7
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 4.7e-89 332.0 307 59.9
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 1.0e-88 330.9 309 57.9
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 1.4e-88 330.5 319 55.8
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 6.8e-88 328.2 319 54.2
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 8.9e-88 327.8 307 55.4
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 1.2e-87 327.4 305 54.8
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 2.0e-87 326.6 309 55.0
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 2.0e-87 326.6 328 54.6
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.6e-87 326.2 312 55.4
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 4.4e-87 325.5 306 53.3
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 1.3e-86 323.9 302 56.0
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 2.2e-86 323.2 305 55.1
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 2.9e-86 322.8 306 52.9
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.9e-86 322.8 307 55.0
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 3.7e-86 322.4 319 53.0
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 1.8e-85 320.1 307 54.7
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.8e-85 320.1 305 54.8
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 3.2e-85 319.3 302 55.6
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 5.4e-85 318.5 303 55.4
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 1.2e-84 317.4 307 56.0
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 4.6e-84 315.5 307 55.0
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 1.0e-83 314.3 308 52.6
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.7e-83 313.5 315 52.4
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 3.0e-83 312.8 306 55.9
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 3.0e-83 312.8 305 53.1
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 3.9e-83 312.4 308 52.3
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 1.1e-82 310.8 308 52.3
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 1.5e-82 310.5 307 55.4
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.9e-82 310.1 311 51.1
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.5e-82 309.7 311 51.4
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 3.3e-82 309.3 315 53.7
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 4.3e-82 308.9 312 50.3
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 5.6e-82 308.5 308 51.9
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 5.6e-82 308.5 324 51.5
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 1.1e-80 304.3 308 50.6
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 1.4e-80 303.9 303 54.1
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 1.8e-80 303.5 314 50.3
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 5.2e-80 302.0 312 54.5
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 3.4e-79 299.3 313 51.4
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 4.4e-79 298.9 308 52.3
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 5.8e-79 298.5 306 52.9
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 5.8e-79 298.5 317 51.4
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 7.5e-79 298.1 296 54.4
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 1.1e-77 294.3 308 50.0
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.9e-77 293.5 306 51.0
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 7.0e-77 291.6 308 51.9
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 7.0e-77 291.6 308 51.3
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 1.6e-76 290.4 307 51.5
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 6.0e-76 288.5 264 59.1
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 6.0e-76 288.5 304 48.7
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 7.8e-76 288.1 308 52.6
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.0e-75 287.7 308 51.9
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.0e-75 287.7 305 51.8
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 1.3e-75 287.3 308 51.0
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.3e-75 287.3 308 50.6
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 3.9e-75 285.8 307 49.5
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 5.0e-75 285.4 296 52.0
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 6.6e-75 285.0 306 49.7
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 1.1e-74 284.3 225 63.1
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 3.3e-74 282.7 285 50.9
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 9.5e-74 281.2 308 49.7
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 9.5e-74 281.2 308 49.7
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 1.1e-72 277.7 306 49.7
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 1.8e-72 276.9 306 49.7
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 3.1e-72 276.2 306 49.7
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 4.0e-72 275.8 308 48.4
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.2e-71 274.2 307 51.5
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.4e-71 272.7 181 74.0
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 1.7e-70 270.4 267 56.6
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.1e-69 267.7 309 49.2
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.4e-69 265.4 315 47.3
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 7.1e-69 265.0 230 59.6
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 3.0e-67 259.6 230 57.8
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 8.6e-67 258.1 222 57.2
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 8.6e-67 258.1 308 45.8
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 2.5e-66 256.5 270 50.0
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 3.3e-66 256.1 335 47.2
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 1.2e-63 247.7 256 53.5
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 6.4e-62 241.9 212 58.0
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 1.3e-59 234.2 277 47.7
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 1.3e-59 234.2 226 55.8
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.5e-58 230.7 265 47.5
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.8e-56 223.8 157 73.2
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 2.4e-56 223.4 283 49.1
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 2.0e-55 220.3 261 51.0
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 2.2e-54 216.9 238 50.0
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 2.1e-52 210.3 238 47.1
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.3e-51 207.6 313 40.3
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 7.3e-50 201.8 183 57.4
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 2.1e-49 200.3 288 45.8
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 2.8e-49 199.9 319 39.8
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 4.8e-49 199.1 314 39.8
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 4.6e-44 182.6 318 34.6
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 4.8e-41 172.6 297 35.0
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 2.6e-39 166.8 181 45.9
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 2.9e-38 163.3 232 40.9
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.6e-36 157.5 157 56.7
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 1.6e-36 157.5 116 61.2
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 3.9e-35 152.9 189 50.3
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 2.1e-33 147.1 186 47.3
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 1.8e-32 144.1 222 36.9
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 3.1e-32 143.3 105 62.9
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 4.0e-32 142.9 191 44.0
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 1.9e-29 134.0 237 40.5
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 4.3e-26 122.9 162 44.4
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.0e-22 111.7 163 45.4
Lj2A135G55 Lonicera japonica HOM05D005679 ORTHO05D007228 1.1e-21 108.2 76 65.8
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 5.5e-21 105.9 88 59.1
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 5.7e-18 95.9 145 40.7
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 7.4e-18 95.5 75 61.3
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.2e-17 94.0 75 60.0
DCAR_009157 Daucus carota HOM05D005679 ORTHO05D007228 1.4e-16 91.3 119 43.7
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 4.1e-16 89.7 169 36.7
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 4.5e-15 86.3 158 34.2
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 7.7e-15 85.5 168 33.9
SEGI_00479 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 9.4e-13 78.6 70 45.7
HanXRQChr10g0313971 Helianthus annuus HOM05D005679 ORTHO05D007228 8.8e-11 72.0 107 43.0
arahy.Tifrunner.gnm1.ann1.7P1BGF Arachis hypogaea HOM05D005679 ORTHO05D003748 4.8e-09 66.2 37 78.4


User provided reference genes

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