Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g16917 Beta vulgaris HOM05D005004 ORTHO05D006097 4.3e-65 251.1 124 100.0
AUR62028526 Chenopodium quinoa HOM05D005004 ORTHO05D006097 5.3e-39 164.5 92 89.1
AUR62006181 Chenopodium quinoa HOM05D005004 ORTHO05D006097 3.8e-37 158.3 89 88.8
Ah.15g090870 Amaranthus hybridus HOM05D004140 ORTHO05D006116 7.9e-35 150.6 80 92.5
Sc20g0006290 Simmondsia chinensis HOM05D005004 ORTHO05D006097 8.2e-32 140.6 89 80.9
Hund03985 Selenicereus undatus HOM05D005004 ORTHO05D006097 3.1e-31 138.7 79 86.1
Nitab4.5_0003512g0070 Nicotiana tabacum HOM05D005004 ORTHO05D006097 4.1e-31 138.3 81 82.7
Nitab4.5_0000368g0180 Nicotiana tabacum HOM05D005004 ORTHO05D006097 5.3e-31 137.9 81 82.7
Peaxi162Scf00673g00319 Petunia axillaris HOM05D005004 ORTHO05D006097 2.0e-30 136.0 81 80.2
DCAR_009165 Daucus carota HOM05D005004 ORTHO05D006097 2.6e-30 135.6 81 81.5
Nitab4.5_0004873g0070 Nicotiana tabacum HOM05D005004 ORTHO05D006097 2.6e-30 135.6 108 65.7
Migut.L01778 Erythranthe guttata HOM05D005004 ORTHO05D006097 4.5e-30 134.8 81 79.0
SalBow5G1155 Salvia bowleyana HOM05D005004 ORTHO05D006097 4.5e-30 134.8 81 79.0
Lj2A137T29 Lonicera japonica HOM05D005004 ORTHO05D006097 5.9e-30 134.4 84 78.6
Sopen01g043930 Solanum pennellii HOM05D005004 ORTHO05D006097 5.9e-30 134.4 81 80.2
Solyc01g100410.3 Solanum lycopersicum HOM05D005004 ORTHO05D006097 7.7e-30 134.0 81 80.2
PGSC0003DMG403002803 Solanum tuberosum HOM05D005004 ORTHO05D006097 7.7e-30 134.0 81 80.2
CAN.G1715.5 Capsicum annuum HOM05D005004 ORTHO05D006097 1.0e-29 133.7 81 80.2
MD16G1269100 Malus domestica HOM05D005004 ORTHO05D006097 2.2e-29 132.5 81 80.2
CAN.G1164.37 Capsicum annuum HOM05D005004 ORTHO05D006097 3.8e-29 131.7 83 75.9
Prupe.5G046500 Prunus persica HOM05D005004 ORTHO05D006097 3.8e-29 131.7 81 79.0
TAR369G1152 Trochodendron aralioides HOM05D005004 ORTHO05D006097 3.8e-29 131.7 85 76.5
SGA_v2.0_scaffold184G39963 Striga asiatica HOM05D005004 ORTHO05D006097 5.0e-29 131.3 81 76.5
unitig_899.g15202 Utricularia gibba HOM05D005004 ORTHO05D006097 6.5e-29 131.0 91 71.4
CSS0031559 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 1.1e-28 130.2 83 78.3
TAR365G0253 Trochodendron aralioides HOM05D005004 ORTHO05D006097 1.1e-28 130.2 86 74.4
MD06G1040300 Malus domestica HOM05D005004 ORTHO05D006097 1.5e-28 129.8 81 79.0
GSVIVG01033842001 Vitis vinifera HOM05D005004 ORTHO05D006097 1.5e-28 129.8 83 79.5
Cc06_g05740 Coffea canephora HOM05D005004 ORTHO05D006097 1.9e-28 129.4 81 76.5
Eucgr.C01891 Eucalyptus grandis HOM05D005004 ORTHO05D006097 1.9e-28 129.4 83 77.1
CDE02G2337 Ceratophyllum demersum HOM05D005004 ORTHO05D006097 2.5e-28 129.0 93 71.0
THA.LOC104826944 Tarenaya hassleriana HOM05D005004 ORTHO05D006097 5.5e-28 127.9 85 74.1
TAR623G0616 Trochodendron aralioides HOM05D005004 ORTHO05D006097 5.5e-28 127.9 90 73.3
Eucgr.K02041 Eucalyptus grandis HOM05D005004 ORTHO05D006097 7.2e-28 127.5 92 72.8
Eucgr.L03536 Eucalyptus grandis HOM05D005004 ORTHO05D006097 7.2e-28 127.5 92 72.8
MSTRG.10365 Avicennia marina HOM05D005004 ORTHO05D006097 9.4e-28 127.1 81 76.5
Cpa.g.sc5.20 Carica papaya HOM05D005004 ORTHO05D006097 9.4e-28 127.1 82 78.0
Atru.chr8.1540 Acer truncatum HOM05D005004 ORTHO05D006097 1.2e-27 126.7 84 70.2
Actinidia07927 Actinidia chinensis HOM05D005004 ORTHO05D006097 1.2e-27 126.7 83 75.9
Rhsim03G0075200 Rhododendron simsii HOM05D005004 ORTHO05D006097 1.2e-27 126.7 87 74.7
Dinv21208 Davidia involucrata HOM05D005004 ORTHO05D006097 1.6e-27 126.3 83 75.9
Dinv31686 Davidia involucrata HOM05D005004 ORTHO05D006097 1.6e-27 126.3 83 75.9
MBI17_g08354_MAGBIO Magnolia biondii HOM05D005004 ORTHO05D006097 1.6e-27 126.3 86 75.6
BcaC03g12974 Brassica carinata HOM05D007309 ORTHO05D006097 2.1e-27 125.9 99 65.7
PGR142G4351 Punica granatum HOM05D005004 ORTHO05D006097 2.1e-27 125.9 83 77.1
RcHm_v2.0_Chr3g0473661 Rosa chinensis HOM05D005004 ORTHO05D006097 2.1e-27 125.9 82 76.8
Aa31LG1G21370 Aethionema arabicum HOM05D005004 ORTHO05D006097 2.7e-27 125.6 81 74.1
CSS0009320 Camellia sinensis var. sinensis HOM05D005004 ORTHO05D006097 2.7e-27 125.6 81 77.8
Duzib093G1830 Durio zibethinus HOM05D005004 ORTHO05D006097 2.7e-27 125.6 83 75.9
FvH4_6g18690 Fragaria vesca HOM05D005004 ORTHO05D006097 2.7e-27 125.6 82 76.8
FAN05G0382 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.7e-27 125.6 82 76.8
FAN05G5799 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.7e-27 125.6 82 76.8
FAN09G0264 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.7e-27 125.6 82 76.8
FAN14G5527 Fragaria x ananassa HOM05D005004 ORTHO05D006097 2.7e-27 125.6 82 76.8
SGA_v2.0_scaffold35G14070 Striga asiatica HOM05D005004 ORTHO05D006097 2.7e-27 125.6 88 72.7
Thecc.05G089000 Theobroma cacao HOM05D005004 ORTHO05D006097 2.7e-27 125.6 83 75.9
Os08g0369700 Oryza sativa ssp. japonica HOM05D005004 ORTHO05D006097 3.6e-27 125.2 83 75.9
A10p32210 Brassica napus HOM05D005004 ORTHO05D006097 4.7e-27 124.8 84 71.4
BraA10t45264Z Brassica rapa HOM05D005004 ORTHO05D006097 4.7e-27 124.8 84 71.4
Lj1g0017616 Lotus japonicus HOM05D005004 ORTHO05D006097 4.7e-27 124.8 86 72.1
Ciclev10012954m.g Citrus clementina HOM05D005004 ORTHO05D006097 6.1e-27 124.4 83 79.5
vmacro07408 Vaccinium macrocarpon HOM05D005004 ORTHO05D006097 6.1e-27 124.4 109 64.2
CANSAT80G1737 Cannabis sativa HOM05D005004 ORTHO05D006097 8.0e-27 124.0 83 75.9
FAN02G1574 Fragaria x ananassa HOM05D005004 ORTHO05D006097 8.0e-27 124.0 82 75.6
Cfa016606 Carpinus fangiana HOM05D005004 ORTHO05D006097 1.0e-26 123.6 82 75.6
COL.COLO4_29735 Corchorus olitorius HOM05D005004 ORTHO05D006097 1.0e-26 123.6 92 70.7
Gohir.A01G138100 Gossypium hirsutum HOM05D005004 ORTHO05D006097 1.0e-26 123.6 86 72.1
Medtr7g104600 Medicago truncatula HOM05D005004 ORTHO05D006097 1.0e-26 123.6 83 73.5
QL07p038766 Quercus lobata HOM05D005004 ORTHO05D006097 1.0e-26 123.6 83 74.7
QL07p039017 Quercus lobata HOM05D005004 ORTHO05D006097 1.0e-26 123.6 83 74.7
ATR0174G014 Amborella trichopoda HOM05D005004 ORTHO05D006097 1.4e-26 123.2 85 72.9
CDE04G1264 Ceratophyllum demersum HOM05D005004 ORTHO05D006097 1.4e-26 123.2 93 68.8
HanXRQChr15g0491011 Helianthus annuus HOM05D005004 ORTHO05D006097 1.4e-26 123.2 81 74.1
HanXRQChr17g0554781 Helianthus annuus HOM05D005004 ORTHO05D006097 1.4e-26 123.2 81 74.1
TPR.G30035 Trifolium pratense HOM05D005004 ORTHO05D006097 1.4e-26 123.2 83 74.7
AL6G13490 Arabidopsis lyrata HOM05D005004 ORTHO05D006097 1.8e-26 122.9 84 69.0
Carub.0006s0286 Capsella rubella HOM05D005004 ORTHO05D006097 1.8e-26 122.9 84 69.0
ClCG03G002740 Citrullus lanatus HOM05D005004 ORTHO05D006097 1.8e-26 122.9 93 67.7
Duzib106G1905 Durio zibethinus HOM05D005004 ORTHO05D006097 1.8e-26 122.9 86 70.9
Gorai.002G158400 Gossypium raimondii HOM05D005004 ORTHO05D006097 1.8e-26 122.9 85 71.8
Hma1.2p1_0232F.1_g097910 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 1.8e-26 122.9 83 73.5
HPP92_018556 Vanilla planifolia HOM05D005004 ORTHO05D006097 1.8e-26 122.9 86 69.8
Zm00001eb170730 Zea mays HOM05D005004 ORTHO05D006097 1.8e-26 122.9 80 77.5
Actinidia05431 Actinidia chinensis HOM05D005004 ORTHO05D006097 3.0e-26 122.1 83 73.5
arahy.Tifrunner.gnm1.ann1.8NC760 Arachis hypogaea HOM05D005004 ORTHO05D006097 3.0e-26 122.1 83 71.1
BcaC06g32094 Brassica carinata HOM05D005004 ORTHO05D006097 3.0e-26 122.1 84 70.2
C09p73010 Brassica napus HOM05D005004 ORTHO05D006097 3.0e-26 122.1 84 70.2
BolC9t60036H Brassica oleracea HOM05D005004 ORTHO05D006097 3.0e-26 122.1 84 70.2
Lj1g0020740 Lotus japonicus HOM05D005004 ORTHO05D006097 3.0e-26 122.1 84 73.8
Sed0018976 Sechium edule HOM05D005004 ORTHO05D006097 3.0e-26 122.1 88 71.6
Haze_19610 Corylus avellana HOM05D005004 ORTHO05D006097 4.0e-26 121.7 83 73.5
Gohir.A01G206300 Gossypium hirsutum HOM05D005004 ORTHO05D006097 4.0e-26 121.7 83 72.3
Psat3g033320 Pisum sativum HOM05D005004 ORTHO05D006097 4.0e-26 121.7 83 72.3
TWI53G1915 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 4.0e-26 121.7 85 70.6
TWI77G0413 Tripterygium wilfordii HOM05D005004 ORTHO05D006097 4.0e-26 121.7 85 69.4
Aqoxy5G00209 Aquilegia oxysepala HOM05D005004 ORTHO05D006097 5.2e-26 121.3 83 73.5
C02p01610 Brassica napus HOM05D005004 ORTHO05D006097 5.2e-26 121.3 84 69.0
BolC2t06126H Brassica oleracea HOM05D005004 ORTHO05D006097 5.2e-26 121.3 84 69.0
Thhalv10014896m.g Eutrema salsugineum HOM05D005004 ORTHO05D006097 5.2e-26 121.3 84 67.9
Gohir.D01G127800 Gossypium hirsutum HOM05D005004 ORTHO05D006097 5.2e-26 121.3 85 70.6
BcaC03g12976 Brassica carinata HOM05D005004 ORTHO05D006097 6.7e-26 120.9 84 69.0
CARHR209350 Cardamine hirsuta HOM05D005004 ORTHO05D006097 8.8e-26 120.6 84 69.0
Sabra06G0064000 Salix brachista HOM05D005004 ORTHO05D006097 8.8e-26 120.6 87 70.1
SalBow5G4790 Salvia bowleyana HOM05D005004 ORTHO05D006097 8.8e-26 120.6 76 76.3
BcaB05g21795 Brassica carinata HOM05D005004 ORTHO05D006097 1.1e-25 120.2 84 67.9
CiPaw.09G013900 Carya illinoinensis HOM05D005004 ORTHO05D006097 1.1e-25 120.2 82 73.2
Gohir.D01G195700 Gossypium hirsutum HOM05D005004 ORTHO05D006097 1.1e-25 120.2 83 71.1
Gorai.002G239900 Gossypium raimondii HOM05D005004 ORTHO05D006097 1.1e-25 120.2 83 71.1
Nn6g34902 Nelumbo nucifera HOM05D005004 ORTHO05D006097 1.1e-25 120.2 86 69.8
SEGI_14769 Sequoiadendron giganteum HOM05D005004 ORTHO05D006097 1.1e-25 120.2 93 64.5
BraA02t04792Z Brassica rapa HOM05D005004 ORTHO05D006097 1.5e-25 119.8 84 67.9
Glyma.13G153600 Glycine max HOM05D005004 ORTHO05D006097 1.5e-25 119.8 87 67.8
Sp6g38820 Schrenkiella parvula HOM05D005004 ORTHO05D006097 1.5e-25 119.8 81 69.1
Lalb_Chr20g0111711 Lupinus albus HOM05D005004 ORTHO05D006097 2.0e-25 119.4 83 72.3
AT5G03905 Arabidopsis thaliana HOM05D005004 ORTHO05D006097 3.3e-25 118.6 84 66.7
CsaV3_1G033770 Cucumis sativus L. HOM05D005004 ORTHO05D006097 3.3e-25 118.6 81 75.3
ECA236G3187 Erigeron canadensis HOM05D005004 ORTHO05D006097 3.3e-25 118.6 79 72.2
Potri.006G084300 Populus trichocarpa HOM05D005004 ORTHO05D006097 4.4e-25 118.2 92 66.3
Phvul.003G095500 Phaseolus vulgaris HOM05D005004 ORTHO05D006097 5.7e-25 117.9 80 71.2
VMungo1215G1361 Vigna mungo HOM05D005004 ORTHO05D006097 5.7e-25 117.9 80 71.2
Manes.08G025200 Manihot esculenta HOM05D005004 ORTHO05D006097 7.5e-25 117.5 92 69.6
CsaV3_1G013480 Cucumis sativus L. HOM05D005004 ORTHO05D006097 1.3e-24 116.7 84 71.4
MELO3C020686.2 Cucumis melo HOM05D005004 ORTHO05D006097 1.7e-24 116.3 81 74.1
Lalb_Chr25g0288321 Lupinus albus HOM05D005004 ORTHO05D006097 1.7e-24 116.3 83 69.9
Sed0022281 Sechium edule HOM05D005004 ORTHO05D006097 2.8e-24 115.5 84 70.2
PSO339G3768 Papaver somniferum HOM05D005004 ORTHO05D006097 3.7e-24 115.2 84 67.9
PSO384G4260 Papaver somniferum HOM05D005004 ORTHO05D006097 3.7e-24 115.2 84 67.9
arahy.Tifrunner.gnm1.ann1.E5K2FZ Arachis hypogaea HOM05D005004 ORTHO05D006097 4.8e-24 114.8 91 65.9
Hma1.2p1_0580F.1_g182880 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 6.3e-24 114.4 79 73.4
ClCG03G001800 Citrullus lanatus HOM05D005004 ORTHO05D006097 2.4e-23 112.5 97 62.9
Zm00001eb042730 Zea mays HOM05D005004 ORTHO05D006097 2.4e-23 112.5 76 72.4
Aa31LG3G2670 Aethionema arabicum HOM05D005004 ORTHO05D006097 5.9e-22 107.8 84 60.7
Os08g0363800 Oryza sativa ssp. japonica HOM05D005004 ORTHO05D006097 1.3e-21 106.7 64 79.7
Pp3c3_34710 Physcomitrium patens HOM05D005004 ORTHO05D006097 1.3e-21 106.7 72 69.4
AagrBONN_evm.TU.Sc2ySwM_228.4176 Anthoceros agrestis HOM05D005004 ORTHO05D006097 2.9e-21 105.5 80 57.5
SMO171G0092 Selaginella moellendorffii HOM05D005004 ORTHO05D006097 5.0e-21 104.8 79 59.5
CBR_g27757 Chara braunii HOM05D005004 ORTHO05D006097 3.2e-20 102.1 90 53.3
Lsat_1_v5_gn_8_77061 Lactuca sativa HOM05D004768 ORTHO05D005812 1.2e-19 100.1 67 74.6
Mapoly0089s0053 Marchantia polymorpha HOM05D005004 ORTHO05D006097 8.0e-19 97.4 84 57.1
Hma1.2p1_3639F.1_g337130 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 1.2e-17 93.6 85 61.2
MCO02G129 Micromonas commoda HOM05D005004 ORTHO05D006097 1.2e-17 93.6 81 51.9
Glyma.03G195800 Glycine max HOM05D005004 ORTHO05D006097 2.2e-13 79.3 78 55.1
Cre07.g349600 Chlamydomonas reinhardtii HOM05D005004 ORTHO05D006097 4.7e-11 71.6 84 40.5
Pp3s30_920 Physcomitrium patens HOM05D002293 ORTHO05D006850 3.0e-10 68.9 80 41.2
vmacro08717 Vaccinium macrocarpon HOM05D005004 ORTHO05D006097 4.0e-10 68.6 41 82.9
MSTRG.5844 Avicennia marina HOM05D005004 ORTHO05D006097 6.8e-10 67.8 43 72.1
Cc06_g20090 Coffea canephora HOM05D005004 ORTHO05D006097 6.8e-10 67.8 40 82.5
PRCOL_00000026 Prasinoderma coloniale HOM05D005004 ORTHO05D006097 1.2e-09 67.0 106 37.7
Hma1.2p1_0160F.1_g071250 Hydrangea macrophylla HOM05D005004 ORTHO05D006097 1.7e-08 63.2 48 70.8
Hma1.2p1_0235F.1_g098620 Hydrangea macrophylla HOM05D005004 ORTHO05D012020 3.7e-08 62.0 79 50.6
Haze_27657 Corylus avellana HOM05D005004 ORTHO05D006097 1.4e-07 60.1 72 37.5
Pp3c14_20400 Physcomitrium patens HOM05D002293 ORTHO05D006850 1.2e-06 57.0 100 35.0
Pp3c1_29460 Physcomitrium patens HOM05D002293 ORTHO05D006850 2.0e-06 56.2 100 34.0


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