Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g16622 Beta vulgaris HOM05D000847 ORTHO05D031653 5.2e-69 264.2 132 100.0
EL10Ac9g22021 Beta vulgaris HOM05D000847 ORTHO05D007447 1.3e-27 126.7 162 49.4
AUR62016471 Chenopodium quinoa HOM05D000847 ORTHO05D007447 6.5e-19 97.8 158 38.6
Hund06624 Selenicereus undatus HOM05D000847 ORTHO05D007447 2.5e-18 95.9 159 40.9
Ah.01g021550 Amaranthus hybridus HOM05D000847 ORTHO05D007447 4.2e-18 95.1 165 39.4
AUR62011643 Chenopodium quinoa HOM05D000847 ORTHO05D007447 7.2e-18 94.4 162 38.3
Lj5C58T13 Lonicera japonica HOM05D000847 ORTHO05D007447 4.8e-14 81.6 120 36.7
RcHm_v2.0_Chr2g0138751 Rosa chinensis HOM05D000847 ORTHO05D007447 6.3e-14 81.3 164 34.8
THA.LOC104817984 Tarenaya hassleriana HOM05D000847 ORTHO05D007447 1.4e-13 80.1 70 52.9
Haze_16373 Corylus avellana HOM05D000847 ORTHO05D007447 1.8e-13 79.7 114 43.0
MD17G1191800 Malus domestica HOM05D000847 ORTHO05D007447 3.1e-13 79.0 57 63.2
FAN02G1503 Fragaria x ananassa HOM05D000847 ORTHO05D007447 4.1e-13 78.6 56 60.7
FAN05G5441 Fragaria x ananassa HOM05D000847 ORTHO05D007447 4.1e-13 78.6 56 60.7
FvH4_6g31670 Fragaria vesca HOM05D000847 ORTHO05D007447 5.3e-13 78.2 56 60.7
FAN14G1800 Fragaria x ananassa HOM05D000847 ORTHO05D007447 5.3e-13 78.2 56 60.7
TAR624G1412 Trochodendron aralioides HOM05D000847 ORTHO05D007447 5.3e-13 78.2 57 59.6
CAN.G438.16 Capsicum annuum HOM05D000847 ORTHO05D007447 9.1e-13 77.4 160 34.4
Prupe.3G067900 Prunus persica HOM05D000847 ORTHO05D007447 9.1e-13 77.4 56 60.7
COL.COLO4_30421 Corchorus olitorius HOM05D000847 ORTHO05D007447 2.0e-12 76.3 159 34.0
Migut.I00949 Erythranthe guttata HOM05D000847 ORTHO05D007447 2.6e-12 75.9 159 34.0
Gohir.D05G130800 Gossypium hirsutum HOM05D000847 ORTHO05D007447 2.6e-12 75.9 57 56.1
Gorai.009G134500 Gossypium raimondii HOM05D000847 ORTHO05D007447 2.6e-12 75.9 57 56.1
Aa31LG10G2650 Aethionema arabicum HOM05D000847 ORTHO05D007447 4.5e-12 75.1 76 47.4
TWI18G0861 Tripterygium wilfordii HOM05D000847 ORTHO05D007447 4.5e-12 75.1 57 59.6
vmacro18895 Vaccinium macrocarpon HOM05D000847 ORTHO05D007447 5.9e-12 74.7 60 55.0
AL1G60430 Arabidopsis lyrata HOM05D000847 ORTHO05D007447 7.7e-12 74.3 75 46.7
Actinidia32735 Actinidia chinensis HOM05D000847 ORTHO05D007447 1.0e-11 73.9 67 52.2
BraA06t23410Z Brassica rapa HOM05D000847 ORTHO05D007447 1.0e-11 73.9 60 48.3
FAN09G1049 Fragaria x ananassa HOM05D000847 ORTHO05D007447 1.0e-11 73.9 56 57.1
Carub.0003s1584 Capsella rubella HOM05D000847 ORTHO05D007447 1.3e-11 73.6 60 51.7
Thecc.06G091400 Theobroma cacao HOM05D000847 ORTHO05D007447 1.3e-11 73.6 57 54.4
ECA232G3820 Erigeron canadensis HOM05D000847 ORTHO05D007447 1.7e-11 73.2 60 53.3
Aa31LG8G3260 Aethionema arabicum HOM05D000847 ORTHO05D007447 2.2e-11 72.8 60 53.3
Atru.chr1.3326 Acer truncatum HOM05D000847 ORTHO05D007447 3.8e-11 72.0 72 47.2
BcaC08g43381 Brassica carinata HOM05D000847 ORTHO05D007447 3.8e-11 72.0 60 46.7
C06p07480 Brassica napus HOM05D000847 ORTHO05D007447 3.8e-11 72.0 60 46.7
BolC6t35837H Brassica oleracea HOM05D000847 ORTHO05D007447 3.8e-11 72.0 60 46.7
Duzib235G1387 Durio zibethinus HOM05D000847 ORTHO05D007447 3.8e-11 72.0 57 52.6
TAR636G1233 Trochodendron aralioides HOM05D001241 ORTHO05D007447 3.8e-11 72.0 61 55.7
Carub.0001s4123 Capsella rubella HOM05D000847 ORTHO05D007447 5.0e-11 71.6 60 48.3
Actinidia01813 Actinidia chinensis HOM05D000847 ORTHO05D007447 6.5e-11 71.2 67 50.7
Actinidia21675 Actinidia chinensis HOM05D000847 ORTHO05D007447 6.5e-11 71.2 67 50.7
AT3G16110 Arabidopsis thaliana HOM05D000847 ORTHO05D007447 6.5e-11 71.2 54 55.6
GSVIVG01017063001 Vitis vinifera HOM05D000847 ORTHO05D007447 6.5e-11 71.2 56 57.1
AT1G52260 Arabidopsis thaliana HOM05D000847 ORTHO05D007447 8.5e-11 70.9 75 42.7
Dinv30490 Davidia involucrata HOM05D000847 ORTHO05D007447 8.5e-11 70.9 58 51.7
PGSC0003DMG400002622 Solanum tuberosum HOM05D000847 ORTHO05D007447 8.5e-11 70.9 160 33.1
Cc04_g03120 Coffea canephora HOM05D000847 ORTHO05D007447 1.1e-10 70.5 51 58.8
MD09G1209900 Malus domestica HOM05D000847 ORTHO05D007447 1.1e-10 70.5 149 34.9
Solyc03g120720.3 Solanum lycopersicum HOM05D000847 ORTHO05D007447 1.1e-10 70.5 58 55.2
C03p90530 Brassica napus HOM05D000847 ORTHO05D007447 1.5e-10 70.1 60 48.3
BolC3t21376H Brassica oleracea HOM05D000847 ORTHO05D007447 1.5e-10 70.1 60 48.3
ClCG07G013130 Citrullus lanatus HOM05D000847 ORTHO05D007447 1.5e-10 70.1 163 31.3
Ciclev10025300m.g Citrus clementina HOM05D000847 ORTHO05D007447 1.5e-10 70.1 57 56.1
Thhalv10011373m.g Eutrema salsugineum HOM05D000847 ORTHO05D007447 1.5e-10 70.1 76 43.4
Manes.04G128900 Manihot esculenta HOM05D000847 ORTHO05D007447 1.5e-10 70.1 57 54.4
Nitab4.5_0008314g0060 Nicotiana tabacum HOM05D000847 ORTHO05D007447 1.5e-10 70.1 160 31.2
Rhsim08G0222800 Rhododendron simsii HOM05D000847 ORTHO05D007447 1.5e-10 70.1 171 33.3
Rhsim08G0222900 Rhododendron simsii HOM05D000847 ORTHO05D007447 1.5e-10 70.1 171 33.3
Sp1g38800 Schrenkiella parvula HOM05D000847 ORTHO05D007447 1.5e-10 70.1 76 42.1
Sopen03g039540 Solanum pennellii HOM05D000847 ORTHO05D007447 1.5e-10 70.1 160 33.1
AL3G28770 Arabidopsis lyrata HOM05D000847 ORTHO05D007447 2.5e-10 69.3 61 49.2
Lsat_1_v5_gn_4_101980 Lactuca sativa HOM05D000847 ORTHO05D007447 2.5e-10 69.3 60 50.0
SGA_v2.0_scaffold37G14841 Striga asiatica HOM05D000847 ORTHO05D007447 2.5e-10 69.3 158 31.6
BraA08t32270Z Brassica rapa HOM05D000847 ORTHO05D007447 3.2e-10 68.9 54 50.0
CARHR091270 Cardamine hirsuta HOM05D000847 ORTHO05D007447 3.2e-10 68.9 61 49.2
CsaV3_3G025020 Cucumis sativus L. HOM05D000847 ORTHO05D007447 3.2e-10 68.9 86 37.2
PGR102G2237 Punica granatum HOM05D000847 ORTHO05D007447 3.2e-10 68.9 67 47.8
Cfa002087 Carpinus fangiana HOM05D000847 ORTHO05D007447 4.2e-10 68.6 60 48.3
Sc15g0001300 Simmondsia chinensis HOM05D000847 ORTHO05D007447 4.2e-10 68.6 59 50.8
CANSAT56G4327 Cannabis sativa HOM05D000847 ORTHO05D007447 5.5e-10 68.2 55 50.9
PSO210G1204 Papaver somniferum HOM05D000847 ORTHO05D007447 5.5e-10 68.2 58 51.7
Sp3g14460 Schrenkiella parvula HOM05D000847 ORTHO05D007447 7.2e-10 67.8 60 48.3
A08p02250 Brassica napus HOM05D000847 ORTHO05D007447 9.4e-10 67.4 54 48.1
Thhalv10020584m.g Eutrema salsugineum HOM05D000847 ORTHO05D007447 9.4e-10 67.4 60 50.0
CiPaw.01G236800 Carya illinoinensis HOM05D000847 ORTHO05D007447 1.2e-09 67.0 57 52.6
PSO210G5089 Papaver somniferum HOM05D000847 ORTHO05D007447 1.2e-09 67.0 57 50.9
BcaB04g17162 Brassica carinata HOM05D000847 ORTHO05D007447 1.6e-09 66.6 54 48.1
HanXRQChr16g0500911 Helianthus annuus HOM05D000847 ORTHO05D007447 1.6e-09 66.6 60 50.0
Nitab4.5_0001315g0230 Nicotiana tabacum HOM05D000847 ORTHO05D007447 1.6e-09 66.6 58 50.0
Potri.001G183500 Populus trichocarpa HOM05D000847 ORTHO05D007447 1.6e-09 66.6 57 52.6
BcaC01g01316 Brassica carinata HOM05D000847 ORTHO05D007447 2.1e-09 66.2 60 45.0
Oeu033504.1 Olea europaea HOM05D000847 ORTHO05D007447 2.1e-09 66.2 161 29.8
Sed0011994 Sechium edule HOM05D000847 ORTHO05D007447 2.1e-09 66.2 86 37.2
MELO3C012969.2 Cucumis melo HOM05D000847 ORTHO05D007447 2.7e-09 65.9 86 36.0
Eucgr.F03031 Eucalyptus grandis HOM05D000847 ORTHO05D007447 3.6e-09 65.5 67 43.3
Nn2g11715 Nelumbo nucifera HOM05D000847 ORTHO05D007447 3.6e-09 65.5 85 37.6
Ca_01125_v3 Cicer arietinum L. HOM05D000847 ORTHO05D007447 4.7e-09 65.1 51 52.9
MBI01_g39981_MAGBIO Magnolia biondii HOM05D000847 ORTHO05D007447 4.7e-09 65.1 169 32.5
A06p01940 Brassica napus HOM05D000847 ORTHO05D007447 6.1e-09 64.7 60 43.3
Aqoxy7G01631 Aquilegia oxysepala HOM05D000847 ORTHO05D007447 8.0e-09 64.3 57 49.1
arahy.Tifrunner.gnm1.ann1.DFND2S Arachis hypogaea HOM05D000847 ORTHO05D007447 8.0e-09 64.3 159 29.6
arahy.Tifrunner.gnm1.ann1.HTSJ7Y Arachis hypogaea HOM05D000847 ORTHO05D007447 8.0e-09 64.3 159 29.6
Nn8g39141 Nelumbo nucifera HOM05D000847 ORTHO05D007447 1.0e-08 63.9 67 47.8
MSTRG.22669 Avicennia marina HOM05D000847 ORTHO05D007447 1.4e-08 63.5 51 52.9
DCAR_007566 Daucus carota HOM05D000847 ORTHO05D007447 1.4e-08 63.5 59 50.8
Psat5g298280 Pisum sativum HOM05D000847 ORTHO05D007447 1.4e-08 63.5 70 42.9
QL05p022088 Quercus lobata HOM05D000847 ORTHO05D007447 1.4e-08 63.5 57 50.9
Glyma.15G015700 Glycine max HOM05D000847 ORTHO05D007447 1.8e-08 63.2 51 51.0
Lalb_Chr14g0373311 Lupinus albus HOM05D000847 ORTHO05D007447 2.3e-08 62.8 51 52.9
Medtr2g093500 Medicago truncatula HOM05D000847 ORTHO05D007447 2.3e-08 62.8 51 52.9
Medtr2g101880 Medicago truncatula HOM05D000847 ORTHO05D007447 2.3e-08 62.8 51 52.9
TPR.G37182 Trifolium pratense HOM05D000847 ORTHO05D007447 5.2e-08 61.6 51 51.0
VMungo1080G0895 Vigna mungo HOM05D000847 ORTHO05D007447 5.2e-08 61.6 51 49.0
Lj3g0009444 Lotus japonicus HOM05D000847 ORTHO05D007447 6.7e-08 61.2 51 49.0
Phvul.005G168200 Phaseolus vulgaris HOM05D000847 ORTHO05D007447 8.8e-08 60.8 51 47.1
Sabra01G0144300 Salix brachista HOM05D000847 ORTHO05D007447 7.5e-07 57.8 37 64.9
MELO3C030169.2 Cucumis melo HOM05D000847 ORTHO05D031653 1.3e-06 57.0 81 32.1


User provided reference genes

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