Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g16265 Beta vulgaris HOM05D002025 ORTHO05D001991 6.9e-71 270.8 163 100.0
AUR62001580 Chenopodium quinoa HOM05D002025 ORTHO05D001991 3.7e-32 142.1 131 72.5
TAR369G1029 Trochodendron aralioides HOM05D002025 ORTHO05D001991 3.1e-10 69.3 83 48.2
TAR623G1549 Trochodendron aralioides HOM05D002025 ORTHO05D001991 6.8e-10 68.2 83 47.0
Sopen06g030250 Solanum pennellii HOM05D002025 ORTHO05D001991 4.4e-09 65.5 53 60.4
Cc06_g06920 Coffea canephora HOM05D002025 ORTHO05D001991 5.8e-09 65.1 83 48.2
Medtr7g106820 Medicago truncatula HOM05D002025 ORTHO05D001991 7.5e-09 64.7 83 45.8
COL.COLO4_25368 Corchorus olitorius HOM05D002025 ORTHO05D001991 1.7e-08 63.5 80 46.2
Migut.J00733 Erythranthe guttata HOM05D002025 ORTHO05D001991 1.7e-08 63.5 83 45.8
Peaxi162Scf00098g00155 Petunia axillaris HOM05D002025 ORTHO05D001991 2.9e-08 62.8 57 57.9
Solyc01g009250.3 Solanum lycopersicum HOM05D002025 ORTHO05D001991 3.7e-08 62.4 87 44.8
Aa31LG5G8620 Aethionema arabicum HOM05D002025 ORTHO05D001991 4.9e-08 62.0 86 38.4
PGSC0003DMG400005908 Solanum tuberosum HOM05D002025 ORTHO05D001991 6.4e-08 61.6 53 60.4
Glyma.03G204500 Glycine max HOM05D002025 ORTHO05D001991 1.1e-07 60.8 68 48.5
PGR142G1790 Punica granatum HOM05D002025 ORTHO05D001991 1.1e-07 60.8 85 43.5
PGSC0003DMG400002991 Solanum tuberosum HOM05D002025 ORTHO05D001991 1.1e-07 60.8 89 44.9
Eucgr.A02549 Eucalyptus grandis HOM05D002025 ORTHO05D001991 1.4e-07 60.5 82 45.1
Solyc06g073850.1 Solanum lycopersicum HOM05D002025 ORTHO05D001991 1.4e-07 60.5 53 56.6
MSTRG.5912 Avicennia marina HOM05D002025 ORTHO05D001991 1.9e-07 60.1 80 46.2
CiPaw.13G126200 Carya illinoinensis HOM05D002025 ORTHO05D001991 1.9e-07 60.1 80 48.8
RcHm_v2.0_Chr3g0477261 Rosa chinensis HOM05D002025 ORTHO05D001991 2.4e-07 59.7 44 61.4
Thecc.09G268500 Theobroma cacao HOM05D002025 ORTHO05D001991 2.4e-07 59.7 80 46.2
VMungo1383G1576 Vigna mungo HOM05D002025 ORTHO05D001991 2.4e-07 59.7 53 56.6
Phvul.001G198100 Phaseolus vulgaris HOM05D002025 ORTHO05D001991 3.2e-07 59.3 83 44.6
FvH4_6g20920 Fragaria vesca HOM05D002025 ORTHO05D001991 4.1e-07 58.9 44 61.4
FAN02G0183 Fragaria x ananassa HOM05D002025 ORTHO05D001991 4.1e-07 58.9 44 61.4
FAN09G2632 Fragaria x ananassa HOM05D002025 ORTHO05D001991 4.1e-07 58.9 44 61.4
FAN14G3941 Fragaria x ananassa HOM05D002025 ORTHO05D001991 4.1e-07 58.9 44 61.4
Nn6g34593 Nelumbo nucifera HOM05D002025 ORTHO05D001991 4.1e-07 58.9 42 66.7
Carub.0004s0772 Capsella rubella HOM05D002025 ORTHO05D001991 5.4e-07 58.5 83 38.6
PGSC0003DMG400013131 Solanum tuberosum HOM05D002025 ORTHO05D001991 5.4e-07 58.5 71 50.7
FAN05G4348 Fragaria x ananassa HOM05D002025 ORTHO05D001991 7.1e-07 58.2 44 59.1
FAN05G4575 Fragaria x ananassa HOM05D002025 ORTHO05D001991 7.1e-07 58.2 44 59.1
Glyma.19G201900 Glycine max HOM05D002025 ORTHO05D001991 7.1e-07 58.2 83 44.6
Gohir.A01G135600 Gossypium hirsutum HOM05D002025 ORTHO05D001991 7.1e-07 58.2 93 39.8
Sopen01g004740 Solanum pennellii HOM05D002025 ORTHO05D001991 7.1e-07 58.2 87 44.8
PGSC0003DMG400021375 Solanum tuberosum HOM05D002025 ORTHO05D001991 7.1e-07 58.2 85 44.7
Oeu045022.1 Olea europaea HOM05D002025 ORTHO05D001991 9.2e-07 57.8 83 42.2
Nitab4.5_0003557g0010 Nicotiana tabacum HOM05D002025 ORTHO05D001991 1.2e-06 57.4 84 41.7
Oeu058126.1 Olea europaea HOM05D002025 ORTHO05D001991 1.2e-06 57.4 83 43.4
PGR119G2356 Punica granatum HOM05D002025 ORTHO05D001991 1.2e-06 57.4 85 45.9
Ca_09078_v3 Cicer arietinum L. HOM05D002025 ORTHO05D001991 1.6e-06 57.0 83 45.8
Duzib170G0914 Durio zibethinus HOM05D002025 ORTHO05D001991 1.6e-06 57.0 80 43.8
Manes.06G067800 Manihot esculenta HOM05D002025 ORTHO05D001991 1.6e-06 57.0 91 39.6
BcaC02g10859 Brassica carinata HOM05D002025 ORTHO05D001991 2.1e-06 56.6 79 39.2
Lalb_Chr25g0287861 Lupinus albus HOM05D002025 ORTHO05D001991 2.1e-06 56.6 85 43.5
Peaxi162Scf00203g00052 Petunia axillaris HOM05D002025 ORTHO05D001991 2.1e-06 56.6 89 43.8
Gohir.D05G080100 Gossypium hirsutum HOM05D002025 ORTHO05D001991 2.7e-06 56.2 51 51.0
Gorai.009G081700 Gossypium raimondii HOM05D002025 ORTHO05D001991 2.7e-06 56.2 51 51.0
CANSAT54G0233 Cannabis sativa HOM05D002025 ORTHO05D001991 3.5e-06 55.8 41 63.4
COL.COLO4_29503 Corchorus olitorius HOM05D002025 ORTHO05D001991 3.5e-06 55.8 50 56.0
Oeu035663.1 Olea europaea HOM05D002025 ORTHO05D001991 3.5e-06 55.8 83 41.0
TPR.G34437 Trifolium pratense HOM05D002025 ORTHO05D001991 3.5e-06 55.8 62 48.4
Psat3g027400 Pisum sativum HOM05D002025 ORTHO05D001991 4.6e-06 55.5 83 44.6
A07p18020 Brassica napus HOM05D002025 ORTHO05D001991 6.0e-06 55.1 55 47.3
BraA07t29520Z Brassica rapa HOM05D002025 ORTHO05D001991 6.0e-06 55.1 55 47.3
Gohir.D01G122800 Gossypium hirsutum HOM05D002025 ORTHO05D001991 6.0e-06 55.1 91 38.5
Lalb_Chr01g0017741 Lupinus albus HOM05D002025 ORTHO05D001991 6.0e-06 55.1 55 52.7
AL172U10020 Arabidopsis lyrata HOM05D002025 ORTHO05D001991 7.8e-06 54.7 51 49.0
AL4G20930 Arabidopsis lyrata HOM05D002025 ORTHO05D001991 7.8e-06 54.7 51 49.0
A05p37640 Brassica napus HOM05D002025 ORTHO05D001991 7.8e-06 54.7 75 41.3
C05p56220 Brassica napus HOM05D002025 ORTHO05D001991 7.8e-06 54.7 75 41.3
BolC5t34286H Brassica oleracea HOM05D002025 ORTHO05D001991 7.8e-06 54.7 75 41.3
BraA05t22561Z Brassica rapa HOM05D002025 ORTHO05D001991 7.8e-06 54.7 75 41.3
Cfa020076 Carpinus fangiana HOM05D002025 ORTHO05D001991 7.8e-06 54.7 42 64.3
Thhalv10021370m.g Eutrema salsugineum HOM05D002025 ORTHO05D001991 7.8e-06 54.7 75 41.3
Lalb_Chr20g0111231 Lupinus albus HOM05D002025 ORTHO05D001991 7.8e-06 54.7 50 56.0
Sabra16G0067700 Salix brachista HOM05D002025 ORTHO05D001991 7.8e-06 54.7 56 46.4
THA.LOC104816625 Tarenaya hassleriana HOM05D002025 ORTHO05D001991 7.8e-06 54.7 77 44.2


User provided reference genes

Program Settings