Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac7g15872 Beta vulgaris HOM05D005258 ORTHO05D006525 2.7e-280 968.0 487 100.0
AUR62036231 Chenopodium quinoa HOM05D005258 ORTHO05D006525 3.1e-175 619.0 497 66.2
Sc21g0004960 Simmondsia chinensis HOM05D005258 ORTHO05D006525 6.9e-175 617.8 502 63.9
AUR62009714 Chenopodium quinoa HOM05D005258 ORTHO05D006525 2.5e-172 609.4 489 66.7
Hund19201 Selenicereus undatus HOM05D005258 ORTHO05D006525 6.5e-157 558.1 563 56.3
Actinidia01232 Actinidia chinensis HOM05D005258 ORTHO05D006525 6.7e-154 548.1 487 60.2
CDE06G2080 Ceratophyllum demersum HOM05D005258 ORTHO05D006525 1.1e-153 547.4 406 67.0
Dinv09684 Davidia involucrata HOM05D005258 ORTHO05D006525 4.8e-152 542.0 398 67.6
Dinv12244 Davidia involucrata HOM05D005258 ORTHO05D006525 6.3e-152 541.6 398 67.3
vmacro00112 Vaccinium macrocarpon HOM05D005258 ORTHO05D006525 3.4e-150 535.8 405 66.4
Cpa.g.sc53.44 Carica papaya HOM05D005258 ORTHO05D006525 4.5e-150 535.4 397 65.5
Duzib168G0041 Durio zibethinus HOM05D005258 ORTHO05D006525 1.3e-149 533.9 421 63.4
CSS0033097 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 2.2e-149 533.1 398 66.6
Prupe.6G046100 Prunus persica HOM05D005258 ORTHO05D006525 5.0e-149 531.9 482 59.8
Sed0015134 Sechium edule HOM05D005258 ORTHO05D006525 8.5e-149 531.2 412 65.0
CSS0008764 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 1.9e-148 530.0 398 66.1
MD11G1060300 Malus domestica HOM05D005258 ORTHO05D006525 1.9e-148 530.0 398 66.8
Eucgr.B04012 Eucalyptus grandis HOM05D005258 ORTHO05D006525 4.2e-148 528.9 397 66.8
PGR102G1249 Punica granatum HOM05D005258 ORTHO05D006525 1.6e-147 526.9 482 57.5
THA.LOC104813633 Tarenaya hassleriana HOM05D005258 ORTHO05D006525 2.7e-147 526.2 391 65.2
GSVIVG01024619001 Vitis vinifera HOM05D005258 ORTHO05D006525 1.8e-146 523.5 398 65.3
FvH4_3g39930 Fragaria vesca HOM05D005258 ORTHO05D006525 2.3e-146 523.1 486 58.0
Rhsim11G0040500 Rhododendron simsii HOM05D005258 ORTHO05D006525 2.3e-146 523.1 485 58.4
Gohir.A08G203600 Gossypium hirsutum HOM05D005258 ORTHO05D006525 3.0e-146 522.7 398 64.6
Manes.18G136600 Manihot esculenta HOM05D005258 ORTHO05D006525 3.0e-146 522.7 412 63.1
QL04p095946 Quercus lobata HOM05D005258 ORTHO05D006525 3.0e-146 522.7 489 56.6
MELO3C020493.2 Cucumis melo HOM05D005258 ORTHO05D006525 3.9e-146 522.3 490 57.3
CsaV3_1G036740 Cucumis sativus L. HOM05D005258 ORTHO05D006525 6.7e-146 521.5 463 59.2
MD03G1058000 Malus domestica HOM05D005258 ORTHO05D006525 6.7e-146 521.5 490 56.9
Gohir.D08G220900 Gossypium hirsutum HOM05D005258 ORTHO05D006525 1.1e-145 520.8 497 55.1
Nn6g33319 Nelumbo nucifera HOM05D005258 ORTHO05D006525 2.0e-145 520.0 390 65.9
CANSAT54G1230 Cannabis sativa HOM05D005258 ORTHO05D006525 2.6e-145 519.6 412 63.1
THA.LOC104812325 Tarenaya hassleriana HOM05D005258 ORTHO05D006525 9.7e-145 517.7 391 65.0
Gorai.004G234600 Gossypium raimondii HOM05D005258 ORTHO05D006525 4.8e-144 515.4 398 63.1
CsaV3_6G022490 Cucumis sativus L. HOM05D005258 ORTHO05D006525 1.1e-143 514.2 486 57.0
PSO384G2283 Papaver somniferum HOM05D005258 ORTHO05D006525 2.4e-143 513.1 409 63.3
Psat5g152360 Pisum sativum HOM05D005258 ORTHO05D006525 2.4e-143 513.1 396 64.6
Lj2C1095G3 Lonicera japonica HOM05D005258 ORTHO05D006525 3.1e-143 512.7 412 62.6
Nitab4.5_0015019g0010 Nicotiana tabacum HOM05D005258 ORTHO05D006525 9.1e-143 511.1 398 64.3
PSO339G6698 Papaver somniferum HOM05D005258 ORTHO05D006525 9.1e-143 511.1 409 63.3
Glyma.11G163000 Glycine max HOM05D005258 ORTHO05D006525 2.0e-142 510.0 397 63.2
Ca_15017_v3 Cicer arietinum L. HOM05D005258 ORTHO05D006525 4.5e-142 508.8 397 64.2
MBI18_g09779_MAGBIO Magnolia biondii HOM05D005258 ORTHO05D006525 5.9e-142 508.4 395 64.6
Phvul.006G074900 Phaseolus vulgaris HOM05D005258 ORTHO05D006525 1.0e-141 507.7 397 63.0
Lsat_1_v5_gn_9_14481 Lactuca sativa HOM05D005258 ORTHO05D006525 1.7e-141 506.9 419 61.1
Lalb_Chr18g0051461 Lupinus albus HOM05D005258 ORTHO05D006525 1.7e-141 506.9 397 63.5
Glyma.18G056300 Glycine max HOM05D005258 ORTHO05D006525 2.9e-141 506.1 397 62.7
CARHR017340 Cardamine hirsuta HOM05D005258 ORTHO05D006525 3.8e-141 505.8 490 55.5
Medtr3g031280 Medicago truncatula HOM05D005258 ORTHO05D006525 3.8e-141 505.8 396 63.6
Ciclev10001075m.g Citrus clementina HOM05D005258 ORTHO05D006525 5.0e-141 505.4 393 63.4
Sp1g15010 Schrenkiella parvula HOM05D005258 ORTHO05D006525 6.5e-141 505.0 401 62.6
Sabra13G0123700 Salix brachista HOM05D005258 ORTHO05D006525 8.5e-141 504.6 412 60.9
FAN11G2675 Fragaria x ananassa HOM05D005258 ORTHO05D006525 1.5e-140 503.8 486 56.4
Solyc06g082370.4 Solanum lycopersicum HOM05D005258 ORTHO05D006525 1.9e-140 503.4 421 60.6
Aqoxy2G00760 Aquilegia oxysepala HOM05D005258 ORTHO05D006525 2.5e-140 503.1 401 61.8
Potri.013G153900 Populus trichocarpa HOM05D005258 ORTHO05D006525 3.2e-140 502.7 393 63.1
Sopen06g033760 Solanum pennellii HOM05D005258 ORTHO05D006525 3.2e-140 502.7 421 60.3
Lj2g0020421 Lotus japonicus HOM05D005258 ORTHO05D006525 4.2e-140 502.3 421 59.9
AT1G16870 Arabidopsis thaliana HOM05D005258 ORTHO05D006525 7.2e-140 501.5 391 63.7
HanXRQChr08g0228541 Helianthus annuus HOM05D005258 ORTHO05D006525 9.4e-140 501.1 411 61.8
TPR.G25689 Trifolium pratense HOM05D005258 ORTHO05D006525 9.4e-140 501.1 393 63.9
Lj2g0010469 Lotus japonicus HOM05D005258 ORTHO05D006525 2.1e-139 500.0 393 62.6
Lj6g0021320 Lotus japonicus HOM05D005258 ORTHO05D006525 2.1e-139 500.0 421 59.6
TWI75G0534 Tripterygium wilfordii HOM05D005258 ORTHO05D006525 2.1e-139 500.0 393 64.1
Carub.0001s1661 Capsella rubella HOM05D005258 ORTHO05D006525 2.7e-139 499.6 391 63.4
C05p15090 Brassica napus HOM05D005258 ORTHO05D006525 6.1e-139 498.4 393 62.8
Haze_24429 Corylus avellana HOM05D005258 ORTHO05D006525 6.1e-139 498.4 430 59.8
PGSC0003DMG400030379 Solanum tuberosum HOM05D005258 ORTHO05D006525 6.1e-139 498.4 421 59.9
AL1G29040 Arabidopsis lyrata HOM05D005258 ORTHO05D006525 1.0e-138 497.7 391 63.2
Atru.chr1.2577 Acer truncatum HOM05D005258 ORTHO05D006525 2.3e-138 496.5 392 63.0
BcaB02g06669 Brassica carinata HOM05D005258 ORTHO05D006525 3.0e-138 496.1 391 63.2
arahy.Tifrunner.gnm1.ann1.0U7N6T Arachis hypogaea HOM05D005258 ORTHO05D006525 5.2e-138 495.4 405 61.0
A06p12780 Brassica napus HOM05D005258 ORTHO05D006525 8.8e-138 494.6 391 62.9
Thhalv10007506m.g Eutrema salsugineum HOM05D005258 ORTHO05D006525 1.2e-137 494.2 391 63.2
BcaC05g25543 Brassica carinata HOM05D005258 ORTHO05D006525 1.5e-137 493.8 391 63.2
Nitab4.5_0002768g0050 Nicotiana tabacum HOM05D005258 ORTHO05D006525 4.8e-136 488.8 398 62.1
Peaxi162Scf00390g00538 Petunia axillaris HOM05D005258 ORTHO05D006525 6.3e-136 488.4 440 58.2
arahy.Tifrunner.gnm1.ann1.R5QLIS Arachis hypogaea HOM05D005258 ORTHO05D006525 8.2e-136 488.0 393 61.3
Os07g0202900 Oryza sativa ssp. japonica HOM05D005258 ORTHO05D006525 1.1e-135 487.6 391 60.6
Cc01_g14990 Coffea canephora HOM05D005258 ORTHO05D006525 3.1e-135 486.1 513 52.4
ClCG03G000160 Citrullus lanatus HOM05D005258 ORTHO05D006525 4.1e-135 485.7 492 55.3
HPP92_026488 Vanilla planifolia HOM05D005258 ORTHO05D006525 7.0e-135 485.0 396 60.6
Zm00001eb116240 Zea mays HOM05D005258 ORTHO05D006525 1.6e-134 483.8 408 59.1
Migut.D00841 Erythranthe guttata HOM05D005258 ORTHO05D006525 2.2e-133 479.9 397 59.9
MSTRG.21245 Avicennia marina HOM05D005258 ORTHO05D006525 5.0e-133 478.8 397 60.2
TAR624G0064 Trochodendron aralioides HOM05D005258 ORTHO05D006525 4.2e-132 475.7 411 60.3
Ah.08g215410 Amaranthus hybridus HOM05D005258 ORTHO05D006525 9.4e-132 474.6 528 54.0
ECA247G3025 Erigeron canadensis HOM05D005258 ORTHO05D006525 4.7e-131 472.2 392 60.5
DCAR_028395 Daucus carota HOM05D005258 ORTHO05D006525 8.0e-131 471.5 386 60.9
HPP92_014227 Vanilla planifolia HOM05D005258 ORTHO05D006525 1.2e-129 467.6 379 61.2
SGA_v2.0_scaffold80G25693 Striga asiatica HOM05D005258 ORTHO05D006525 1.1e-127 461.1 429 55.7
CiPaw.14G053300 Carya illinoinensis HOM05D005258 ORTHO05D006525 2.4e-127 459.9 361 63.2
SalBow6G5766 Salvia bowleyana HOM05D005258 ORTHO05D006525 1.5e-124 450.7 411 56.0
Dinv28705 Davidia involucrata HOM05D005258 ORTHO05D006525 1.2e-123 447.6 302 69.5
Cfa011791 Carpinus fangiana HOM05D005258 ORTHO05D006525 8.0e-123 444.9 488 51.4
Nitab4.5_0002494g0040 Nicotiana tabacum HOM05D005258 ORTHO05D006525 6.8e-122 441.8 471 52.9
ATR0681G175 Amborella trichopoda HOM05D005258 ORTHO05D006525 1.5e-121 440.7 363 61.2
unitig_747.g21452 Utricularia gibba HOM05D005258 ORTHO05D006525 4.7e-115 419.1 384 56.5
CiPaw.13G067700 Carya illinoinensis HOM05D005258 ORTHO05D006525 1.5e-113 414.1 398 55.3
Aa31LG7G1300 Aethionema arabicum HOM05D005258 ORTHO05D006525 3.2e-111 406.4 391 54.7
SalBow6G5836 Salvia bowleyana HOM05D005258 ORTHO05D006525 8.6e-109 398.3 378 55.0
SEGI_17098 Sequoiadendron giganteum HOM05D005258 ORTHO05D006525 7.0e-103 378.6 433 46.0
Rhsim06G0112000 Rhododendron simsii HOM05D005258 ORTHO05D006525 3.1e-90 336.7 391 48.8
CAN.G1095.27 Capsicum annuum HOM05D005258 ORTHO05D006525 4.9e-88 329.3 207 72.5
VMungo0540G0790 Vigna mungo HOM05D005258 ORTHO05D006525 1.4e-87 327.8 208 73.6
Thecc.09G359400 Theobroma cacao HOM05D005258 ORTHO05D006525 3.5e-86 323.2 276 59.4
COL.COLO4_11171 Corchorus olitorius HOM05D005258 ORTHO05D006525 1.5e-84 317.8 398 45.0
Mapoly0019s0020 Marchantia polymorpha HOM05D005258 ORTHO05D006525 8.1e-83 312.0 396 42.9
TAR633G1809 Trochodendron aralioides HOM05D005258 ORTHO05D006525 9.9e-81 305.1 278 58.6
RcHm_v2.0_Chr5g0071921 Rosa chinensis HOM05D005258 ORTHO05D006525 2.2e-80 303.9 174 82.2
Pp3c11_22290 Physcomitrium patens HOM05D005258 ORTHO05D006525 7.8e-78 295.4 425 43.1
AagrBONN_evm.TU.Sc2ySwM_117.1403 Anthoceros agrestis HOM05D005258 ORTHO05D006525 2.5e-76 290.4 387 40.8
BraA06t24438Z Brassica rapa HOM05D005258 ORTHO05D006525 6.2e-75 285.8 170 78.2
SMO353G0383 Selaginella moellendorffii HOM05D005258 ORTHO05D006525 8.7e-69 265.4 279 46.2
QL01p025810 Quercus lobata HOM05D005258 ORTHO05D006525 4.0e-66 256.5 381 43.6
FAN25G3091 Fragaria x ananassa HOM05D005258 ORTHO05D006525 2.8e-59 233.8 328 44.5
CBR_g40648 Chara braunii HOM05D005258 ORTHO05D006525 4.6e-54 216.5 307 41.4
VMungo0540G2447 Vigna mungo HOM05D005258 ORTHO05D006525 1.2e-49 201.8 187 55.1
RcHm_v2.0_Chr5g0071911 Rosa chinensis HOM05D005258 ORTHO05D006525 4.2e-47 193.4 271 43.9
FAN16G1300 Fragaria x ananassa HOM05D005258 ORTHO05D006525 1.0e-45 188.7 270 43.3
CAN.G1095.26 Capsicum annuum HOM05D005258 ORTHO05D000750 1.1e-44 185.3 235 47.2
FAN21G1740 Fragaria x ananassa HOM05D005258 ORTHO05D006525 7.4e-44 182.6 270 42.2
BcaC07g38819 Brassica carinata HOM05D005258 ORTHO05D006525 2.2e-43 181.0 246 44.7
BolC5t30224H Brassica oleracea HOM05D005258 ORTHO05D006525 4.1e-42 176.8 176 51.7
C08p17580 Brassica napus HOM05D005258 ORTHO05D006525 9.4e-39 165.6 93 80.6
QL01p025812 Quercus lobata HOM05D005258 ORTHO05D006525 4.1e-34 150.2 87 78.2
TAR628G0009 Trochodendron aralioides HOM05D005258 ORTHO05D006525 1.6e-30 138.3 165 48.5
MBI11_g20619_MAGBIO Magnolia biondii HOM05D000666 ORTHO05D001431 8.8e-29 132.5 85 75.3
BolC8t49383H Brassica oleracea HOM05D005258 ORTHO05D006525 2.6e-28 131.0 75 80.0
PRCOL_00003540 Prasinoderma coloniale HOM05D005258 ORTHO05D006525 1.8e-21 108.2 410 28.5
TAR628G1613 Trochodendron aralioides HOM05D005258 ORTHO05D006525 2.0e-20 104.8 286 29.7
BraA08t35049Z Brassica rapa HOM05D005258 ORTHO05D006525 9.7e-20 102.4 67 73.1
Lsat_1_v5_gn_3_46641 Lactuca sativa HOM05D005258 ORTHO05D006525 5.3e-18 96.7 152 39.5
CSS0045112 Camellia sinensis var. sinensis HOM05D005258 ORTHO05D006525 3.2e-15 87.4 55 72.7
CAN.G1538.6 Capsicum annuum HOM05D005258 ORTHO05D006525 3.0e-13 80.9 71 59.2
CAN.G403.12 Capsicum annuum HOM05D005258 ORTHO05D006525 5.2e-13 80.1 65 61.5
Lsat_1_v5_gn_3_46621 Lactuca sativa HOM05D005258 ORTHO05D006525 1.2e-12 79.0 63 60.3
MCO01G624 Micromonas commoda HOM05D005258 ORTHO05D006525 3.5e-09 67.4 326 24.5
Cre03.g176700 Chlamydomonas reinhardtii HOM05D005258 ORTHO05D006525 1.7e-08 65.1 67 43.3
Lsat_1_v5_gn_7_20901 Lactuca sativa HOM05D005258 ORTHO05D006525 1.7e-08 65.1 36 77.8
SalBow1G0607 Salvia bowleyana HOM05D005258 ORTHO05D362423 1.6e-06 58.5 81 38.3
A08p31260 Brassica napus HOM05D005258 ORTHO05D006525 4.7e-06 57.0 32 84.4


User provided reference genes

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