Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac6g14984 Beta vulgaris HOM05D006060 ORTHO05D007268 8.2e-70 266.9 133 100.0
AUR62003112 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.4e-53 213.0 175 68.0
Hund25185 Selenicereus undatus HOM05D006060 ORTHO05D007268 2.4e-53 212.2 155 73.5
Hund05841 Selenicereus undatus HOM05D006060 ORTHO05D007268 1.0e-51 206.8 132 81.1
Sc11g0002390 Simmondsia chinensis HOM05D006060 ORTHO05D007268 1.1e-47 193.4 131 74.8
Potri.010G159200 Populus trichocarpa HOM05D006060 ORTHO05D007268 2.2e-46 189.1 129 75.2
PGR102G1832 Punica granatum HOM05D006060 ORTHO05D007268 8.2e-46 187.2 131 72.5
Ca_24569_v3 Cicer arietinum L. HOM05D006060 ORTHO05D007268 1.8e-45 186.0 131 74.0
Potri.008G095100 Populus trichocarpa HOM05D006060 ORTHO05D007268 1.8e-45 186.0 129 73.6
Prupe.1G285900 Prunus persica HOM05D006060 ORTHO05D007268 1.8e-45 186.0 130 73.1
Atru.chr11.1651 Acer truncatum HOM05D006060 ORTHO05D007268 5.3e-45 184.5 129 73.6
MD16G1062000 Malus domestica HOM05D006060 ORTHO05D007268 1.5e-44 183.0 129 71.3
Manes.01G028500 Manihot esculenta HOM05D006060 ORTHO05D007268 1.5e-44 183.0 129 72.9
QL03p072164 Quercus lobata HOM05D006060 ORTHO05D007268 1.5e-44 183.0 144 66.7
QL03p072544 Quercus lobata HOM05D006060 ORTHO05D007268 1.5e-44 183.0 144 66.7
Glyma.05G201000 Glycine max HOM05D006060 ORTHO05D007268 2.0e-44 182.6 129 72.9
Psat2g129720 Pisum sativum HOM05D006060 ORTHO05D007268 2.6e-44 182.2 131 72.5
MD13G1063500 Malus domestica HOM05D006060 ORTHO05D007268 5.9e-44 181.0 129 70.5
Sp1g22270 Schrenkiella parvula HOM05D006060 ORTHO05D007268 1.0e-43 180.3 131 70.2
Thecc.02G332700 Theobroma cacao HOM05D006060 ORTHO05D007268 1.0e-43 180.3 131 71.8
CiPaw.06G092000 Carya illinoinensis HOM05D006060 ORTHO05D007268 1.3e-43 179.9 132 70.5
RcHm_v2.0_Chr4g0438511 Rosa chinensis HOM05D006060 ORTHO05D007268 1.7e-43 179.5 128 72.7
ClCG00G002570 Citrullus lanatus HOM05D006060 ORTHO05D007268 3.8e-43 178.3 134 69.4
ClCG05G023750 Citrullus lanatus HOM05D006060 ORTHO05D007268 3.8e-43 178.3 134 69.4
C07p19380 Brassica napus HOM05D006060 ORTHO05D007268 8.5e-43 177.2 133 68.4
MELO3C012147.2 Cucumis melo HOM05D006060 ORTHO05D007268 8.5e-43 177.2 132 69.7
FAN22G0197 Fragaria x ananassa HOM05D006060 ORTHO05D007268 8.5e-43 177.2 126 71.4
Phvul.002G282400 Phaseolus vulgaris HOM05D006060 ORTHO05D007268 8.5e-43 177.2 129 69.0
TAR622G0987 Trochodendron aralioides HOM05D006060 ORTHO05D007268 8.5e-43 177.2 132 69.7
Carub.0001s2455 Capsella rubella HOM05D006060 ORTHO05D007268 1.1e-42 176.8 131 69.5
FvH4_4g30180 Fragaria vesca HOM05D006060 ORTHO05D007268 1.1e-42 176.8 126 72.2
Ah.03g138960 Amaranthus hybridus HOM05D006060 ORTHO05D007268 1.4e-42 176.4 130 73.1
THA.LOC104822014 Tarenaya hassleriana HOM05D006060 ORTHO05D007268 1.9e-42 176.0 127 70.1
VMungo0251G0770 Vigna mungo HOM05D006060 ORTHO05D007268 1.9e-42 176.0 129 69.0
BcaB03g14067 Brassica carinata HOM05D006060 ORTHO05D007268 2.5e-42 175.6 131 67.9
CARHR025490 Cardamine hirsuta HOM05D006060 ORTHO05D007268 2.5e-42 175.6 131 69.5
A09p39890 Brassica napus HOM05D006060 ORTHO05D007268 3.2e-42 175.3 129 69.8
CsaV3_5G033260 Cucumis sativus L. HOM05D006060 ORTHO05D007268 3.2e-42 175.3 132 68.9
Duzib248G0204 Durio zibethinus HOM05D006060 ORTHO05D007268 3.2e-42 175.3 129 69.8
Glyma.08G008300 Glycine max HOM05D006060 ORTHO05D007268 3.2e-42 175.3 131 71.0
Thhalv10009087m.g Eutrema salsugineum HOM05D006060 ORTHO05D007268 4.2e-42 174.9 127 70.9
Sed0026741 Sechium edule HOM05D006060 ORTHO05D007268 4.2e-42 174.9 132 66.7
arahy.Tifrunner.gnm1.ann1.GS86GR Arachis hypogaea HOM05D006060 ORTHO05D007268 5.5e-42 174.5 132 70.5
CANSAT64G1324 Cannabis sativa HOM05D006060 ORTHO05D007268 5.5e-42 174.5 131 71.8
Gohir.A13G081800 Gossypium hirsutum HOM05D006060 ORTHO05D007268 7.2e-42 174.1 129 68.2
Gohir.D13G081600 Gossypium hirsutum HOM05D006060 ORTHO05D007268 7.2e-42 174.1 129 68.2
Gorai.013G093500 Gossypium raimondii HOM05D006060 ORTHO05D007268 7.2e-42 174.1 129 68.2
Lj2g0026655 Lotus japonicus HOM05D006060 ORTHO05D007268 1.2e-41 173.3 129 69.8
Ciclev10033030m.g Citrus clementina HOM05D006060 ORTHO05D007268 1.6e-41 172.9 126 70.6
TPR.G24456 Trifolium pratense HOM05D006060 ORTHO05D007268 2.1e-41 172.6 125 69.6
Dinv34077 Davidia involucrata HOM05D006060 ORTHO05D007268 2.7e-41 172.2 132 69.7
HanXRQChr15g0477061 Helianthus annuus HOM05D006060 ORTHO05D007268 2.7e-41 172.2 132 66.7
BolC5t31187H Brassica oleracea HOM05D006060 ORTHO05D007268 3.6e-41 171.8 128 70.3
Lsat_1_v5_gn_3_55960 Lactuca sativa HOM05D006060 ORTHO05D007268 3.6e-41 171.8 132 66.7
HanXRQChr12g0375301 Helianthus annuus HOM05D006060 ORTHO05D007268 4.7e-41 171.4 132 66.7
Aa31LG7G8620 Aethionema arabicum HOM05D006060 ORTHO05D007268 1.0e-40 170.2 133 66.9
CSS0014880 Camellia sinensis var. sinensis HOM05D006060 ORTHO05D007268 1.0e-40 170.2 127 69.3
MBI16_g10268_MAGBIO Magnolia biondii HOM05D006060 ORTHO05D007268 1.4e-40 169.9 130 67.7
Medtr5g044200 Medicago truncatula HOM05D006060 ORTHO05D007268 1.8e-40 169.5 131 64.9
AL1G39270 Arabidopsis lyrata HOM05D006060 ORTHO05D007268 2.3e-40 169.1 127 67.7
AT1G26470 Arabidopsis thaliana HOM05D006060 ORTHO05D007268 3.0e-40 168.7 127 67.7
A07p12940 Brassica napus HOM05D006060 ORTHO05D007268 3.9e-40 168.3 127 68.5
Dinv16724 Davidia involucrata HOM05D006060 ORTHO05D007268 6.7e-40 167.5 124 70.2
TWI31G0802 Tripterygium wilfordii HOM05D006060 ORTHO05D007268 6.7e-40 167.5 137 66.4
Nn4g23399 Nelumbo nucifera HOM05D006060 ORTHO05D007268 8.8e-40 167.2 132 68.2
Lalb_Chr04g0255711 Lupinus albus HOM05D006060 ORTHO05D007268 1.1e-39 166.8 131 62.6
HPP92_014051 Vanilla planifolia HOM05D006060 ORTHO05D007268 1.5e-39 166.4 132 63.6
Aqoxy3G00506 Aquilegia oxysepala HOM05D006060 ORTHO05D007268 2.0e-39 166.0 126 65.9
BolC7t42457H Brassica oleracea HOM05D006060 ORTHO05D007268 2.6e-39 165.6 126 68.3
PSO017G1874 Papaver somniferum HOM05D006060 ORTHO05D007268 2.6e-39 165.6 133 65.4
C05p24530 Brassica napus HOM05D006060 ORTHO05D007268 4.4e-39 164.9 124 68.5
PSO478G3582 Papaver somniferum HOM05D006060 ORTHO05D007268 9.7e-39 163.7 133 64.7
GSVIVG01012208001 Vitis vinifera HOM05D006060 ORTHO05D007268 4.8e-38 161.4 128 67.2
BcaC06g35142 Brassica carinata HOM05D006060 ORTHO05D007268 6.3e-38 161.0 124 67.7
Duzib251G0249 Durio zibethinus HOM05D006060 ORTHO05D007268 8.2e-38 160.6 131 65.6
ECA246G0948 Erigeron canadensis HOM05D006060 ORTHO05D007268 1.4e-37 159.8 127 64.6
Eucgr.G02454 Eucalyptus grandis HOM05D006060 ORTHO05D007268 3.1e-37 158.7 125 66.4
CAN.G616.32 Capsicum annuum HOM05D006060 ORTHO05D007268 4.1e-37 158.3 130 63.8
PGSC0003DMG400028321 Solanum tuberosum HOM05D006060 ORTHO05D007268 4.1e-37 158.3 130 64.6
ATR0064G055 Amborella trichopoda HOM05D006060 ORTHO05D007268 9.1e-37 157.1 127 64.6
Sopen05g007220 Solanum pennellii HOM05D006060 ORTHO05D007268 9.1e-37 157.1 130 63.8
AUR62007927 Chenopodium quinoa HOM05D006060 ORTHO05D007268 1.6e-36 156.4 179 52.0
MD02G1257200 Malus domestica HOM05D006060 ORTHO05D007268 1.6e-36 156.4 130 63.1
Solyc05g012400.4 Solanum lycopersicum HOM05D006060 ORTHO05D007268 2.0e-36 156.0 130 63.1
Os05g0512500 Oryza sativa ssp. japonica HOM05D006060 ORTHO05D007268 5.9e-36 154.5 128 60.9
Oeu048147.1 Olea europaea HOM05D006060 ORTHO05D007268 3.8e-35 151.8 131 58.8
SalBow2G0810 Salvia bowleyana HOM05D006060 ORTHO05D007268 5.5e-34 147.9 127 59.1
MSTRG.7750 Avicennia marina HOM05D006060 ORTHO05D007268 9.4e-34 147.1 125 60.0
Zm00001eb292660 Zea mays HOM05D006060 ORTHO05D007268 3.6e-33 145.2 118 62.7
Migut.L01198 Erythranthe guttata HOM05D006060 ORTHO05D007268 6.1e-33 144.4 129 58.9
Sabra10G0120900 Salix brachista HOM05D006060 ORTHO05D007268 6.1e-33 144.4 131 61.8
Medtr6g053980 Medicago truncatula HOM05D006060 ORTHO05D007268 8.0e-33 144.1 129 57.4
unitig_747.g21188 Utricularia gibba HOM05D006060 ORTHO05D007268 2.3e-32 142.5 129 56.6
SGA_v2.0_scaffold36G14451 Striga asiatica HOM05D006060 ORTHO05D007268 4.0e-32 141.7 126 56.3
arahy.Tifrunner.gnm1.ann1.KWWI2Y Arachis hypogaea HOM05D006060 ORTHO05D007268 6.8e-32 141.0 137 59.9
CDE02G4092 Ceratophyllum demersum HOM05D006060 ORTHO05D007268 1.2e-31 140.2 131 58.8
SGA_v2.0_scaffold16G07773 Striga asiatica HOM05D006060 ORTHO05D007268 1.5e-31 139.8 128 55.5
FAN07G0043 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.6e-31 139.0 126 60.3
FAN12G2760 Fragaria x ananassa HOM05D006060 ORTHO05D007268 2.2e-30 136.0 126 59.5
SEGI_32210 Sequoiadendron giganteum HOM05D006060 ORTHO05D007268 3.7e-30 135.2 136 55.9
BraA07t29067Z Brassica rapa HOM05D006060 ORTHO05D007268 4.8e-30 134.8 129 57.4
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 1.1e-29 133.7 125 59.2
Actinidia28644 Actinidia chinensis HOM05D006060 ORTHO05D007268 7.0e-29 131.0 130 58.5
A03p24590 Brassica napus HOM05D006060 ORTHO05D007268 1.2e-28 130.2 116 61.2
Peaxi162Scf00175g00019 Petunia axillaris HOM05D006060 ORTHO05D007268 2.0e-28 129.4 100 64.0
BraA09t39056Z Brassica rapa HOM05D006060 ORTHO05D007268 4.5e-28 128.3 116 60.3
Nitab4.5_0000231g0430 Nicotiana tabacum HOM05D006060 ORTHO05D007268 7.7e-28 127.5 99 62.6
PGSC0003DMG400042856 Solanum tuberosum HOM05D006060 ORTHO05D007268 1.7e-27 126.3 129 53.5
BraA09t39488Z Brassica rapa HOM05D006060 ORTHO05D007268 3.8e-27 125.2 100 63.0
Lalb_Chr10g0098731 Lupinus albus HOM05D006060 ORTHO05D007268 1.1e-26 123.6 131 50.4
Sopen05g007230 Solanum pennellii HOM05D006060 ORTHO05D007268 2.7e-25 119.0 129 51.2
Solyc05g012410.2 Solanum lycopersicum HOM05D006060 ORTHO05D007268 6.1e-25 117.9 129 51.2
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 8.0e-25 117.5 96 61.5
SMO351G0453 Selaginella moellendorffii HOM05D006060 ORTHO05D007268 1.4e-24 116.7 117 53.0
AagrBONN_evm.TU.Sc2ySwM_228.4858 Anthoceros agrestis HOM05D006821 ORTHO05D007268 2.3e-24 115.9 119 52.1
Haze_11918 Corylus avellana HOM05D006060 ORTHO05D007268 6.8e-24 114.4 80 68.8
Sabra08G0071500 Salix brachista HOM05D006060 ORTHO05D007268 1.5e-23 113.2 145 45.5
Nitab4.5_0004171g0060 Nicotiana tabacum HOM05D006060 ORTHO05D007268 3.4e-23 112.1 94 61.7
COL.COLO4_27898 Corchorus olitorius HOM05D006060 ORTHO05D007268 2.4e-21 105.9 69 72.5
Pp3c14_19070 Physcomitrium patens HOM05D006060 ORTHO05D007268 2.4e-21 105.9 112 50.0
Cc11_g12110 Coffea canephora HOM05D006060 ORTHO05D007268 5.4e-21 104.8 70 68.6
Mapoly0056s0111 Marchantia polymorpha HOM05D006060 ORTHO05D007268 1.2e-20 103.6 116 47.4
PGSC0003DMG400041308 Solanum tuberosum HOM05D006060 ORTHO05D007268 7.7e-20 100.9 107 53.3
C02p24560 Brassica napus HOM05D006060 ORTHO05D007268 8.9e-16 87.4 86 54.7
A07p29750 Brassica napus HOM05D006060 ORTHO05D007268 4.4e-15 85.1 83 61.4
TPR.G29681 Trifolium pratense HOM05D006060 ORTHO05D007268 2.7e-12 75.9 60 61.7
SHI21665 Sapria himalayana HOM05D000105 ORTHO05D000023 9.5e-10 67.4 65 60.0
CBR_g4585 Chara braunii HOM05D006060 ORTHO05D007268 1.6e-09 66.6 106 35.8
Cc11_g12100 Coffea canephora HOM05D006060 ORTHO05D007268 2.8e-09 65.9 49 65.3
DCAR_007189 Daucus carota HOM05D006060 ORTHO05D007268 8.0e-09 64.3 48 64.6
BcaB03g11990 Brassica carinata HOM05D006060 ORTHO05D007268 5.2e-08 61.6 49 55.1


User provided reference genes

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