Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac6g14900 Beta vulgaris HOM05D000264 ORTHO05D012434 9.7e-83 310.1 153 100.0
EL10Ac6g14897 Beta vulgaris HOM05D000264 ORTHO05D012434 1.2e-51 206.8 151 68.9
AUR62008011 Chenopodium quinoa HOM05D000264 ORTHO05D012434 4.1e-49 198.4 148 67.6
AUR62003190 Chenopodium quinoa HOM05D000264 ORTHO05D012434 6.1e-45 184.5 150 62.7
AUR62003192 Chenopodium quinoa HOM05D000264 ORTHO05D012434 4.9e-42 174.9 149 62.4
AUR62008009 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.4e-41 173.3 136 64.7
AUR62003193 Chenopodium quinoa HOM05D000264 ORTHO05D012434 4.5e-40 168.3 154 56.5
Hund14137 Selenicereus undatus HOM05D000264 ORTHO05D012434 6.1e-37 157.9 151 52.3
Hund14136 Selenicereus undatus HOM05D000264 ORTHO05D012434 9.8e-35 150.6 152 51.3
Ah.03g139620 Amaranthus hybridus HOM05D000264 ORTHO05D012434 5.4e-33 144.8 125 60.0
AUR62008012 Chenopodium quinoa HOM05D000264 ORTHO05D012434 7.3e-30 134.4 149 52.3
AUR62003195 Chenopodium quinoa HOM05D000264 ORTHO05D012434 1.0e-28 130.6 149 51.0
Ah.03g139630 Amaranthus hybridus HOM05D000264 ORTHO05D012434 1.4e-28 130.2 161 43.5
AUR62008010 Chenopodium quinoa HOM05D000264 ORTHO05D012434 1.1e-22 110.5 152 45.4
Hund06899 Selenicereus undatus HOM05D000264 ORTHO05D000152 2.2e-18 96.3 139 38.8
Ah.10g027140 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.4e-17 92.8 134 40.3
EL10Ac6g14902 Beta vulgaris HOM05D000264 ORTHO05D012434 3.2e-17 92.4 129 41.1
Ah.06g196290 Amaranthus hybridus HOM05D000264 ORTHO05D000152 7.1e-17 91.3 139 35.3
AUR62027914 Chenopodium quinoa HOM05D000264 ORTHO05D000152 9.2e-17 90.9 148 37.8
AUR62003194 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.2e-16 90.5 144 34.7
AUR62020785 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.6e-16 90.1 148 37.2
Ah.08g217810 Amaranthus hybridus HOM05D000264 ORTHO05D000152 4.6e-16 88.6 134 38.1
Dinv02176 Davidia involucrata HOM05D000264 ORTHO05D000152 4.6e-16 88.6 134 36.6
AUR62032680 Chenopodium quinoa HOM05D000264 ORTHO05D000152 6.0e-16 88.2 147 39.5
Dinv01341 Davidia involucrata HOM05D000264 ORTHO05D000152 6.0e-16 88.2 146 33.6
EL10Ac4g07661 Beta vulgaris HOM05D000264 ORTHO05D000152 7.8e-16 87.8 110 44.5
Ah.15g093670 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.0e-15 87.4 150 38.0
CARHR251860 Cardamine hirsuta HOM05D000264 ORTHO05D000152 1.3e-15 87.0 137 38.7
A02p13600 Brassica napus HOM05D000264 ORTHO05D000152 1.7e-15 86.7 150 34.0
BraA02t06419Z Brassica rapa HOM05D000264 ORTHO05D000152 1.7e-15 86.7 150 34.0
Hund12311 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.7e-15 86.7 136 39.0
BolC2t08325H Brassica oleracea HOM05D000264 ORTHO05D000152 3.0e-15 85.9 150 34.0
Hund16575 Selenicereus undatus HOM05D000264 ORTHO05D000152 3.0e-15 85.9 135 36.3
BcaC03g14743 Brassica carinata HOM05D000264 ORTHO05D000152 3.9e-15 85.5 150 34.0
Sc16g0001310 Simmondsia chinensis HOM05D038590 ORTHO05D012434 3.9e-15 85.5 149 33.6
Hund29466 Selenicereus undatus HOM05D000264 ORTHO05D000152 5.1e-15 85.1 135 37.8
Hund29467 Selenicereus undatus HOM05D000264 ORTHO05D000152 5.1e-15 85.1 135 37.8
AUR62041307 Chenopodium quinoa HOM05D000264 ORTHO05D000152 6.6e-15 84.7 147 37.4
Ah.01g022540 Amaranthus hybridus HOM05D000264 ORTHO05D000152 1.5e-14 83.6 144 36.1
Hund18035 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.5e-14 83.6 136 39.7
EL10Ac6g14901 Beta vulgaris HOM05D000264 ORTHO05D000152 1.9e-14 83.2 148 35.1
Hund30812 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.9e-14 83.2 134 35.8
Ah.01g022500 Amaranthus hybridus HOM05D000264 ORTHO05D000152 2.5e-14 82.8 144 35.4
AT4G03490 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 2.5e-14 82.8 145 37.2
Potri.013G133900 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.5e-14 82.8 136 34.6
AUR62024036 Chenopodium quinoa HOM05D000264 ORTHO05D000152 3.3e-14 82.4 147 36.7
AT1G03670 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 4.3e-14 82.0 142 37.3
C02p21940 Brassica napus HOM05D000264 ORTHO05D000152 7.3e-14 81.3 150 33.3
Sc16g0001260 Simmondsia chinensis HOM05D032452 ORTHO05D012434 9.5e-14 80.9 150 33.3
QL04p023639 Quercus lobata HOM05D000264 ORTHO05D000152 1.2e-13 80.5 137 35.0
QL04p024009 Quercus lobata HOM05D000264 ORTHO05D000152 1.6e-13 80.1 137 35.0
BcaB01g01946 Brassica carinata HOM05D000264 ORTHO05D000152 2.1e-13 79.7 155 36.8
Sc16g0001100 Simmondsia chinensis HOM05D038590 ORTHO05D012434 2.1e-13 79.7 149 33.6
Hund30678 Selenicereus undatus HOM05D000264 ORTHO05D000152 2.8e-13 79.3 97 41.2
Sc16g0001300 Simmondsia chinensis HOM05D000264 ORTHO05D000152 3.6e-13 79.0 123 33.3
BcaC04g23970 Brassica carinata HOM05D000264 ORTHO05D000152 2.3e-12 76.3 158 36.7
BolC9t53211H Brassica oleracea HOM05D000264 ORTHO05D000152 2.3e-12 76.3 158 36.7
Ah.08g219730 Amaranthus hybridus HOM05D000264 ORTHO05D000152 3.1e-12 75.9 147 37.4
Potri.013G134466 Populus trichocarpa HOM05D000264 ORTHO05D000152 4.0e-12 75.5 136 35.3
Sp6g03500 Schrenkiella parvula HOM05D000264 ORTHO05D000152 4.0e-12 75.5 145 33.8
THA.LOC104801174 Tarenaya hassleriana HOM05D000264 ORTHO05D000152 4.0e-12 75.5 139 38.8
Sc12g0002980 Simmondsia chinensis HOM05D000264 ORTHO05D000152 5.2e-12 75.1 142 32.4
Sabra13G0113300 Salix brachista HOM05D000264 ORTHO05D000152 6.8e-12 74.7 139 33.8
Glyma.06G293900 Glycine max HOM05D000264 ORTHO05D000152 8.9e-12 74.3 156 34.6
C09p02850 Brassica napus HOM05D000264 ORTHO05D000152 1.2e-11 73.9 158 36.7
BcaB02g06911 Brassica carinata HOM05D000264 ORTHO05D000152 1.5e-11 73.6 130 37.7
Actinidia11041 Actinidia chinensis HOM05D000264 ORTHO05D000152 2.0e-11 73.2 135 34.1
Glyma.06G294100 Glycine max HOM05D000264 ORTHO05D000152 2.0e-11 73.2 156 34.0
Potri.013G133700 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.0e-11 73.2 135 33.3
TWI36G0414 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 2.0e-11 73.2 134 32.1
Thhalv10028485m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 5.8e-11 71.6 134 32.8
EL10Ac4g07662 Beta vulgaris HOM05D000264 ORTHO05D000152 7.6e-11 71.2 104 38.5
A10p02160 Brassica napus HOM05D000264 ORTHO05D000152 7.6e-11 71.2 130 33.8
BraA10t42486Z Brassica rapa HOM05D000264 ORTHO05D000152 7.6e-11 71.2 130 33.8
Glyma.12G112400 Glycine max HOM05D000264 ORTHO05D000152 7.6e-11 71.2 140 36.4
AT4G03440 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 9.9e-11 70.9 134 31.3
Sabra11G0081300 Salix brachista HOM05D000264 ORTHO05D000152 9.9e-11 70.9 135 31.9
Ah.01g022570 Amaranthus hybridus HOM05D000264 ORTHO05D012434 1.3e-10 70.5 150 34.7
Carub.0008s1779 Capsella rubella HOM05D000264 ORTHO05D000152 1.7e-10 70.1 150 33.3
Carub.0106s0002 Capsella rubella HOM05D000264 ORTHO05D000152 1.7e-10 70.1 134 32.1
Potri.013G133800 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.7e-10 70.1 135 32.6
EL10Ac6g14899 Beta vulgaris HOM05D000264 ORTHO05D000152 2.9e-10 69.3 148 31.8
Carub.0007s2784 Capsella rubella HOM05D000264 ORTHO05D000152 2.9e-10 69.3 133 32.3
Lalb_Chr01g0005281 Lupinus albus HOM05D000264 ORTHO05D000152 2.9e-10 69.3 131 35.1
Psat2g024840 Pisum sativum HOM05D000264 ORTHO05D000152 2.9e-10 69.3 140 34.3
BcaC05g24511 Brassica carinata HOM05D000264 ORTHO05D000152 3.8e-10 68.9 123 36.6
C05p02120 Brassica napus HOM05D000264 ORTHO05D000152 3.8e-10 68.9 123 36.6
BolC5t28989H Brassica oleracea HOM05D000264 ORTHO05D000152 3.8e-10 68.9 123 36.6
Sabra13G0113700 Salix brachista HOM05D000264 ORTHO05D000152 3.8e-10 68.9 135 33.3
Eucgr.B01059 Eucalyptus grandis HOM05D000264 ORTHO05D000152 6.4e-10 68.2 136 34.6
TWI36G1297 Tripterygium wilfordii HOM05D000264 ORTHO05D000152 6.4e-10 68.2 139 28.8
GSVIVG01010727001 Vitis vinifera HOM05D000264 ORTHO05D000152 6.4e-10 68.2 143 31.5
Actinidia04484 Actinidia chinensis HOM05D000264 ORTHO05D000152 8.4e-10 67.8 131 33.6
CSS0045559 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.1e-09 67.4 146 32.9
Carub.0007s2782 Capsella rubella HOM05D000264 ORTHO05D000152 1.1e-09 67.4 134 33.6
AUR62003189 Chenopodium quinoa HOM05D000264 ORTHO05D000152 1.1e-09 67.4 138 32.6
DCAR_013640 Daucus carota HOM05D000484 ORTHO05D000346 1.1e-09 67.4 135 33.3
Phvul.011G117400 Phaseolus vulgaris HOM05D000264 ORTHO05D000152 1.1e-09 67.4 139 34.5
CSS0040861 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.4e-09 67.0 147 30.6
Dinv06866 Davidia involucrata HOM05D000264 ORTHO05D000152 1.4e-09 67.0 133 30.8
Eucgr.H03466 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.4e-09 67.0 139 33.1
Potri.013G133400 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.4e-09 67.0 136 34.6
QL05p012353 Quercus lobata HOM05D000264 ORTHO05D000152 1.4e-09 67.0 176 29.0
Dinv01346 Davidia involucrata HOM05D000264 ORTHO05D000152 1.9e-09 66.6 94 36.2
Sc06g0006110 Simmondsia chinensis HOM05D000264 ORTHO05D000152 1.9e-09 66.6 127 30.7
FvH4_3g05910 Fragaria vesca HOM05D000264 ORTHO05D000152 2.4e-09 66.2 126 34.1
AUR62001334 Chenopodium quinoa HOM05D000264 ORTHO05D000152 3.2e-09 65.9 147 33.3
AUR62027916 Chenopodium quinoa HOM05D000264 ORTHO05D000152 3.2e-09 65.9 68 44.1
Glyma.06G294200 Glycine max HOM05D000264 ORTHO05D000152 3.2e-09 65.9 157 33.1
Carub.0006s3357 Capsella rubella HOM05D000264 ORTHO05D000152 4.1e-09 65.5 136 31.6
Dinv14027 Davidia involucrata HOM05D000264 ORTHO05D000152 4.1e-09 65.5 134 31.3
Dinv14026 Davidia involucrata HOM05D000264 ORTHO05D000152 5.4e-09 65.1 149 30.9
CARHR100500 Cardamine hirsuta HOM05D000264 ORTHO05D000152 9.2e-09 64.3 134 34.3
GSVIVG01001649001 Vitis vinifera HOM05D000264 ORTHO05D000152 9.2e-09 64.3 143 31.5
Eucgr.K00462 Eucalyptus grandis HOM05D000264 ORTHO05D000152 1.6e-08 63.5 135 31.1
Cpa.g.sc34.146 Carica papaya HOM05D000264 ORTHO05D000152 2.1e-08 63.2 135 31.9
Thhalv10028559m.g Eutrema salsugineum HOM05D000264 ORTHO05D000152 2.1e-08 63.2 134 32.8
Cc01_g07200 Coffea canephora HOM05D000480 ORTHO05D000313 2.7e-08 62.8 143 24.5
RcHm_v2.0_Chr5g0027121 Rosa chinensis HOM05D000264 ORTHO05D000152 3.5e-08 62.4 145 26.9
BcaC01g00780 Brassica carinata HOM05D000264 ORTHO05D000152 4.6e-08 62.0 126 30.2
Rhsim06G0144100 Rhododendron simsii HOM05D000264 ORTHO05D000152 4.6e-08 62.0 118 30.5
Actinidia11042 Actinidia chinensis HOM05D000264 ORTHO05D000152 6.0e-08 61.6 134 32.8
Ah.15g093680 Amaranthus hybridus HOM05D000264 ORTHO05D000152 6.0e-08 61.6 148 31.1
AT4G03470 Arabidopsis thaliana HOM05D000264 ORTHO05D000152 6.0e-08 61.6 135 31.9
Hund00046 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.0e-07 60.8 58 51.7
BcaC04g23968 Brassica carinata HOM05D000264 ORTHO05D000152 1.7e-07 60.1 134 32.8
Hund30646 Selenicereus undatus HOM05D000264 ORTHO05D000152 1.7e-07 60.1 89 36.0
Psat2g025280 Pisum sativum HOM05D000264 ORTHO05D000152 2.3e-07 59.7 140 30.7
Sp6g16660 Schrenkiella parvula HOM05D000454 ORTHO05D002637 2.3e-07 59.7 141 31.2
GSVIVG01010730001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.3e-07 59.7 139 31.7
GSVIVG01020905001 Vitis vinifera HOM05D000264 ORTHO05D000152 2.3e-07 59.7 139 29.5
Ah.08g219000 Amaranthus hybridus HOM05D000264 ORTHO05D000152 3.0e-07 59.3 154 32.5
Peaxi162Scf00071g00016 Petunia axillaris HOM05D000264 ORTHO05D000152 3.0e-07 59.3 115 34.8
Psat2g025480 Pisum sativum HOM05D000264 ORTHO05D000152 3.0e-07 59.3 140 31.4
GSVIVG01020527001 Vitis vinifera HOM05D000264 ORTHO05D000152 3.0e-07 59.3 114 33.3
Ah.15g093690 Amaranthus hybridus HOM05D000264 ORTHO05D000152 3.9e-07 58.9 148 31.1
Carub.0006s3358 Capsella rubella HOM05D000264 ORTHO05D000152 3.9e-07 58.9 133 33.1
Lalb_Chr20g0108371 Lupinus albus HOM05D000264 ORTHO05D000152 3.9e-07 58.9 128 32.0
QL10p001535 Quercus lobata HOM05D000480 ORTHO05D000313 3.9e-07 58.9 154 26.6
Sc07g0003550 Simmondsia chinensis HOM05D000264 ORTHO05D000152 3.9e-07 58.9 146 28.8
Ah.08g219030 Amaranthus hybridus HOM05D000264 ORTHO05D000152 5.1e-07 58.5 129 30.2
A03p14470 Brassica napus HOM05D000454 ORTHO05D002637 5.1e-07 58.5 140 32.9
AUR62027915 Chenopodium quinoa HOM05D000264 ORTHO05D000152 5.1e-07 58.5 71 36.6
Actinidia14393 Actinidia chinensis HOM05D000480 ORTHO05D000313 6.6e-07 58.2 131 30.5
BraA03t10742Z Brassica rapa HOM05D000454 ORTHO05D002637 6.6e-07 58.2 140 32.9
CARHR002990 Cardamine hirsuta HOM05D000264 ORTHO05D000152 6.6e-07 58.2 92 35.9
Cc01_g07190 Coffea canephora HOM05D000480 ORTHO05D000313 6.6e-07 58.2 141 24.1
Cc09_g09270 Coffea canephora HOM05D000009 ORTHO05D000313 6.6e-07 58.2 143 25.9
Lj3A489T26 Lonicera japonica HOM05D000264 ORTHO05D000152 6.6e-07 58.2 150 30.0
C03p16880 Brassica napus HOM05D000454 ORTHO05D002637 8.6e-07 57.8 140 32.1
CSS0049254 Camellia sinensis var. sinensis HOM05D000264 ORTHO05D000152 1.1e-06 57.4 128 30.5
Carub.0008s1496 Capsella rubella HOM05D000454 ORTHO05D002637 1.1e-06 57.4 101 33.7
Rhsim10G0025900 Rhododendron simsii HOM05D000480 ORTHO05D000313 1.1e-06 57.4 145 28.3
GSVIVG01010731001 Vitis vinifera HOM05D000264 ORTHO05D000152 1.1e-06 57.4 144 29.9
Dinv29918 Davidia involucrata HOM05D000264 ORTHO05D000152 1.5e-06 57.0 131 29.0
Gohir.D04G184500 Gossypium hirsutum HOM05D000264 ORTHO05D000152 1.5e-06 57.0 104 38.5
Gorai.012G178200 Gossypium raimondii HOM05D000264 ORTHO05D000152 1.5e-06 57.0 104 38.5
Manes.09G064600 Manihot esculenta HOM05D000480 ORTHO05D000313 1.5e-06 57.0 136 28.7
QL09p051472 Quercus lobata HOM05D000480 ORTHO05D000313 1.5e-06 57.0 150 27.3
SEGI_24925 Sequoiadendron giganteum HOM05D000264 ORTHO05D000152 1.5e-06 57.0 117 32.5
QL02p075547 Quercus lobata HOM05D000264 ORTHO05D000152 1.9e-06 56.6 103 34.0
Peaxi162Scf00091g00066 Petunia axillaris HOM05D000480 ORTHO05D000313 2.5e-06 56.2 138 24.6
QL02p075438 Quercus lobata HOM05D000264 ORTHO05D000152 2.5e-06 56.2 117 29.1
Sopen06g030730 Solanum pennellii HOM05D000480 ORTHO05D000313 2.5e-06 56.2 150 28.7
FvH4_1g10430 Fragaria vesca HOM05D000264 ORTHO05D000152 3.3e-06 55.8 144 29.2
Manes.09G064501 Manihot esculenta HOM05D000480 ORTHO05D000313 3.3e-06 55.8 131 29.0
QL09p051404 Quercus lobata HOM05D000480 ORTHO05D000313 3.3e-06 55.8 150 26.7
AUR62022207 Chenopodium quinoa HOM05D000264 ORTHO05D000152 4.3e-06 55.5 119 31.9
Ciclev10006527m.g Citrus clementina HOM05D000264 ORTHO05D000152 4.3e-06 55.5 150 28.0
Migut.D00741 Erythranthe guttata HOM05D000264 ORTHO05D000152 4.3e-06 55.5 129 34.1
Prupe.7G182300 Prunus persica HOM05D000264 ORTHO05D000152 4.3e-06 55.5 134 30.6
GSVIVG01013591001 Vitis vinifera HOM05D000264 ORTHO05D000152 4.3e-06 55.5 93 33.3
AUR62043848 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.6e-06 55.1 148 29.1
BcaC01g06320 Brassica carinata HOM05D000454 ORTHO05D002637 7.3e-06 54.7 140 31.4
Prupe.3G062300 Prunus persica HOM05D000454 ORTHO05D002637 7.3e-06 54.7 130 30.0
QL06p034443 Quercus lobata HOM05D000480 ORTHO05D000313 7.3e-06 54.7 150 25.3
QL09p051350 Quercus lobata HOM05D000480 ORTHO05D000313 7.3e-06 54.7 150 25.3
Atru.chr4.2245 Acer truncatum HOM05D000264 ORTHO05D000152 9.6e-06 54.3 135 33.3
Eucgr.K00461 Eucalyptus grandis HOM05D000264 ORTHO05D000152 9.6e-06 54.3 126 31.0
Gorai.012G179900 Gossypium raimondii HOM05D000264 ORTHO05D000152 9.6e-06 54.3 130 34.6
Potri.019G107000 Populus trichocarpa HOM05D000264 ORTHO05D000152 9.6e-06 54.3 133 30.8


User provided reference genes

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