Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac6g14887 Beta vulgaris HOM05D001907 ORTHO05D089013 1.7e-278 962.2 548 100.0
Aqoxy4G01587 Aquilegia oxysepala HOM05D001907 ORTHO05D002387 1.4e-14 85.5 136 32.4
Aqoxy4G01558 Aquilegia oxysepala HOM05D001907 ORTHO05D002387 1.3e-12 79.0 134 31.3
Aqoxy4G01542 Aquilegia oxysepala HOM05D001907 ORTHO05D002387 2.2e-12 78.2 106 34.9
BcaC06g36755 Brassica carinata HOM05D001907 ORTHO05D002387 7.9e-10 69.7 97 34.0
ATR0810G174 Amborella trichopoda HOM05D001907 ORTHO05D002387 1.3e-09 68.9 97 37.1
BcaC02g08889 Brassica carinata HOM05D001907 ORTHO05D002387 1.8e-09 68.6 97 33.0
unitig_52.g17757 Utricularia gibba HOM05D001907 ORTHO05D002387 2.3e-09 68.2 101 33.7
Nn4g26408 Nelumbo nucifera HOM05D001907 ORTHO05D002387 3.9e-09 67.4 97 36.1
PSO782G5711 Papaver somniferum HOM05D001907 ORTHO05D002387 5.1e-09 67.0 100 38.0
Nitab4.5_0000457g0300 Nicotiana tabacum HOM05D001907 ORTHO05D002387 1.1e-08 65.9 97 37.1
TAR636G0269 Trochodendron aralioides HOM05D001907 ORTHO05D002387 1.1e-08 65.9 233 24.9
BcaB03g16311 Brassica carinata HOM05D001907 ORTHO05D002387 1.5e-08 65.5 113 31.9
Nitab4.5_0005372g0030 Nicotiana tabacum HOM05D001907 ORTHO05D002387 1.5e-08 65.5 108 34.3
Rhsim03G0171200 Rhododendron simsii HOM05D001907 ORTHO05D002387 1.5e-08 65.5 97 32.0
vmacro06769 Vaccinium macrocarpon HOM05D001907 ORTHO05D002387 1.5e-08 65.5 97 35.1
C04p49420 Brassica napus HOM05D001907 ORTHO05D002387 2.5e-08 64.7 104 31.7
BolC4t26527H Brassica oleracea HOM05D001907 ORTHO05D002387 3.3e-08 64.3 104 31.7
BolC7t40480H Brassica oleracea HOM05D001907 ORTHO05D002387 3.3e-08 64.3 97 33.0
Dinv00569 Davidia involucrata HOM05D001907 ORTHO05D011097 3.3e-08 64.3 105 31.4
HanXRQChr16g0512681 Helianthus annuus HOM05D001907 ORTHO05D002387 3.3e-08 64.3 101 28.7
Pp3c7_15020 Physcomitrium patens HOM05D001907 ORTHO05D002387 3.3e-08 64.3 98 34.7
Pp3c7_15024 Physcomitrium patens HOM05D001907 ORTHO05D002387 3.3e-08 64.3 98 34.7
DCAR_020207 Daucus carota HOM05D001907 ORTHO05D002387 5.6e-08 63.5 99 33.3
Solyc01g091340.3 Solanum lycopersicum HOM05D001907 ORTHO05D002387 5.6e-08 63.5 97 35.1
Sopen01g037080 Solanum pennellii HOM05D001907 ORTHO05D002387 5.6e-08 63.5 97 35.1
PGSC0003DMG400012775 Solanum tuberosum HOM05D001907 ORTHO05D002387 5.6e-08 63.5 97 35.1
FvH4_7g11890 Fragaria vesca HOM05D001907 ORTHO05D002387 9.6e-08 62.8 97 32.0
FAN06G3384 Fragaria x ananassa HOM05D001907 ORTHO05D002387 9.6e-08 62.8 97 32.0
FAN06G4921 Fragaria x ananassa HOM05D001907 ORTHO05D002387 9.6e-08 62.8 97 32.0
FAN10G3471 Fragaria x ananassa HOM05D001907 ORTHO05D002387 9.6e-08 62.8 97 32.0
arahy.Tifrunner.gnm1.ann1.L8ZILJ Arachis hypogaea HOM05D001907 ORTHO05D002387 1.6e-07 62.0 97 34.0
FAN03G1003 Fragaria x ananassa HOM05D001907 ORTHO05D002387 1.6e-07 62.0 97 32.0
arahy.Tifrunner.gnm1.ann1.DY30JI Arachis hypogaea HOM05D001907 ORTHO05D002387 2.8e-07 61.2 97 34.0
Lj1A984T84 Lonicera japonica HOM05D001907 ORTHO05D002387 2.8e-07 61.2 101 32.7
arahy.Tifrunner.gnm1.ann1.Y0LP2I Arachis hypogaea HOM05D001907 ORTHO05D002387 3.7e-07 60.8 97 34.0
PSO782G3057 Papaver somniferum HOM05D001907 ORTHO05D002387 3.7e-07 60.8 97 33.0
Mapoly0084s0048 Marchantia polymorpha HOM05D001907 ORTHO05D002387 4.8e-07 60.5 100 35.0
PSO478G3343 Papaver somniferum HOM05D001907 ORTHO05D002387 4.8e-07 60.5 97 34.0
QL01p040141 Quercus lobata HOM05D001907 ORTHO05D002387 4.8e-07 60.5 97 35.1
RcHm_v2.0_Chr1g0375081 Rosa chinensis HOM05D001907 ORTHO05D002387 4.8e-07 60.5 179 24.0
Thecc.07G183800 Theobroma cacao HOM05D001907 ORTHO05D002387 4.8e-07 60.5 264 20.8
GSVIVG01018518001 Vitis vinifera HOM05D001907 ORTHO05D002387 4.8e-07 60.5 239 23.4
arahy.Tifrunner.gnm1.ann1.8W7DG1 Arachis hypogaea HOM05D001907 ORTHO05D002387 6.2e-07 60.1 97 33.0
Migut.F00433 Erythranthe guttata HOM05D001907 ORTHO05D002387 6.2e-07 60.1 101 29.7
Hund04635 Selenicereus undatus HOM05D001907 ORTHO05D002387 6.2e-07 60.1 101 33.7
Ciclev10004843m.g Citrus clementina HOM05D001907 ORTHO05D002387 1.8e-06 58.5 97 32.0
AT3G12340 Arabidopsis thaliana HOM05D001907 ORTHO05D002387 2.4e-06 58.2 98 30.6
TAR629G1911 Trochodendron aralioides HOM05D001907 ORTHO05D002387 3.1e-06 57.8 97 32.0
Eucgr.B01534 Eucalyptus grandis HOM05D001907 ORTHO05D002387 4.0e-06 57.4 101 31.7
Atru.chr1.639 Acer truncatum HOM05D001907 ORTHO05D002387 9.0e-06 56.2 101 30.7
Dinv43711 Davidia involucrata HOM05D001907 ORTHO05D002387 9.0e-06 56.2 120 30.8
FAN03G2303 Fragaria x ananassa HOM05D001907 ORTHO05D002387 9.0e-06 56.2 234 21.8
FAN06G2134 Fragaria x ananassa HOM05D001907 ORTHO05D002387 9.0e-06 56.2 235 23.0
FAN06G3852 Fragaria x ananassa HOM05D001907 ORTHO05D002387 9.0e-06 56.2 235 23.0


User provided reference genes

Program Settings