Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac6g14690 Beta vulgaris HOM05D012529 ORTHO05D013419 5.2e-232 807.4 413 100.0
AUR62003065 Chenopodium quinoa HOM05D012529 ORTHO05D013419 1.6e-116 423.7 430 56.0
AUR62003069 Chenopodium quinoa HOM05D012529 ORTHO05D013419 1.6e-116 423.7 430 56.0
AUR62007882 Chenopodium quinoa HOM05D012529 ORTHO05D013419 6.4e-113 411.8 415 56.4
Ah.02g126740 Amaranthus hybridus HOM05D012529 ORTHO05D013419 1.6e-63 247.7 414 41.3
AUR62007880 Chenopodium quinoa HOM05D012529 ORTHO05D013419 6.0e-63 245.7 211 62.6
AUR62003068 Chenopodium quinoa HOM05D012529 ORTHO05D013419 3.2e-48 196.8 378 38.4
AUR62003066 Chenopodium quinoa HOM05D012529 ORTHO05D013419 7.4e-45 185.7 235 50.2
AUR62007881 Chenopodium quinoa HOM05D012529 ORTHO05D013419 5.5e-40 169.5 306 41.2
EL10Ac6g14686 Beta vulgaris HOM05D012529 ORTHO05D013419 1.1e-32 145.2 81 87.7
Sc14g0007890 Simmondsia chinensis HOM05D012529 ORTHO05D013419 1.5e-24 118.2 173 41.6
Sc14g0007830 Simmondsia chinensis HOM05D019376 ORTHO05D013419 2.8e-15 87.4 161 36.0
Sc14g0007860 Simmondsia chinensis HOM05D019376 ORTHO05D013419 5.2e-14 83.2 234 30.8
Sc14g0007880 Simmondsia chinensis HOM05D019376 ORTHO05D013419 5.2e-14 83.2 133 40.6
Sc14g0007920 Simmondsia chinensis HOM05D019376 ORTHO05D013419 4.4e-13 80.1 163 36.2
AUR62003067 Chenopodium quinoa HOM05D012529 ORTHO05D013419 1.8e-11 74.7 95 46.3
Nitab4.5_0000258g0090 Nicotiana tabacum HOM05D000155 ORTHO05D000022 2.3e-09 67.8 157 28.7
FvH4_3g24081 Fragaria vesca HOM05D000003 ORTHO05D000022 1.5e-08 65.1 137 34.3
Nitab4.5_0001443g0030 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.9e-08 64.7 160 35.6
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 4.3e-08 63.5 155 31.6
RcHm_v2.0_Chr4g0393821 Rosa chinensis HOM05D000003 ORTHO05D000022 5.6e-08 63.2 137 37.2
FvH4_3g24611 Fragaria vesca HOM05D000003 ORTHO05D000004 1.2e-07 62.0 138 36.2
FvH4_5g23942 Fragaria vesca HOM05D002480 ORTHO05D003145 1.6e-07 61.6 132 36.4
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 2.1e-07 61.2 136 33.8
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 2.1e-07 61.2 130 34.6
Peaxi162Scf00041g00183 Petunia axillaris HOM05D000155 ORTHO05D000022 2.1e-07 61.2 160 30.0
RcHm_v2.0_Chr4g0404581 Rosa chinensis HOM05D000003 ORTHO05D000022 2.1e-07 61.2 130 38.5
Aa31sc222G90 Aethionema arabicum HOM05D000003 ORTHO05D001091 3.6e-07 60.5 163 27.6
Nitab4.5_0004637g0040 Nicotiana tabacum HOM05D000155 ORTHO05D000022 8.0e-07 59.3 162 29.0
Cc00_g03270 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-06 58.5 160 28.8
Cc00_g05820 Coffea canephora HOM05D000155 ORTHO05D000022 1.4e-06 58.5 160 28.8
Nitab4.5_0000084g0340 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.4e-06 58.5 160 28.1
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 1.4e-06 58.5 171 28.1
AUR62043782 Chenopodium quinoa HOM05D008685 ORTHO05D000022 1.8e-06 58.2 166 31.3
FvH4_4g13392 Fragaria vesca HOM05D000003 ORTHO05D000022 2.3e-06 57.8 131 34.4
RcHm_v2.0_Chr4g0422501 Rosa chinensis HOM05D000003 ORTHO05D000022 2.3e-06 57.8 136 35.3
vmacro02127 Vaccinium macrocarpon HOM05D000003 ORTHO05D000004 2.3e-06 57.8 134 29.1
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 3.0e-06 57.4 131 35.9
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 3.0e-06 57.4 155 29.0
FvH4_2g21141 Fragaria vesca HOM05D000003 ORTHO05D000022 4.0e-06 57.0 130 35.4
Prupe.1G162400 Prunus persica HOM05D000003 ORTHO05D000022 4.0e-06 57.0 127 35.4
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 8.9e-06 55.8 171 26.9


User provided reference genes

Program Settings