Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 4.6e-32 140.6 69 100.0
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 6.6e-23 110.2 71 81.7
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.2e-19 99.4 69 76.8
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.2e-19 99.4 69 75.4
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 1.1e-17 92.8 69 72.5
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 1.4e-17 92.4 70 68.6
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 1.6e-16 89.0 69 63.8
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 2.7e-16 88.2 69 63.8
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 2.7e-16 88.2 69 63.8
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 4.6e-16 87.4 69 69.6
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 6.0e-16 87.0 69 69.6
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 1.0e-15 86.3 69 65.2
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 1.7e-15 85.5 70 60.0
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 2.3e-15 85.1 69 65.2
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 2.3e-15 85.1 69 60.9
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 3.0e-15 84.7 69 60.9
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 6.6e-15 83.6 69 62.3
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 6.6e-15 83.6 69 60.9
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 6.6e-15 83.6 69 63.8
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 8.7e-15 83.2 69 62.3
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 8.7e-15 83.2 69 59.4
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 8.7e-15 83.2 69 59.4
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 8.7e-15 83.2 69 58.0
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 1.1e-14 82.8 69 62.3
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 1.5e-14 82.4 69 58.0
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 1.5e-14 82.4 70 65.7
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 1.5e-14 82.4 69 60.9
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 1.9e-14 82.0 70 57.1
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 1.9e-14 82.0 69 55.1
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 1.9e-14 82.0 69 59.4
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.5e-14 81.6 70 57.1
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 2.5e-14 81.6 69 55.1
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.5e-14 81.6 70 58.6
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 3.3e-14 81.3 69 62.3
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 4.3e-14 80.9 69 59.4
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 4.3e-14 80.9 69 62.3
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 5.6e-14 80.5 70 61.4
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 5.6e-14 80.5 69 59.4
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 5.6e-14 80.5 69 63.8
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 5.6e-14 80.5 69 56.5
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 9.6e-14 79.7 70 58.6
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 1.3e-13 79.3 70 57.1
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.3e-13 79.3 70 57.1
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.3e-13 79.3 71 60.6
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 1.6e-13 79.0 70 55.7
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.6e-13 79.0 69 55.1
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 1.6e-13 79.0 69 62.3
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 2.1e-13 78.6 72 58.3
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.8e-13 78.2 70 55.7
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 2.8e-13 78.2 70 54.3
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 2.8e-13 78.2 69 58.0
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 3.6e-13 77.8 70 55.7
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 3.6e-13 77.8 70 55.7
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 3.6e-13 77.8 70 55.7
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 3.6e-13 77.8 70 60.0
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 6.2e-13 77.0 53 73.6
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 8.1e-13 76.6 69 58.0
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 8.1e-13 76.6 68 57.4
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 8.1e-13 76.6 69 59.4
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 1.1e-12 76.3 70 57.1
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.1e-12 76.3 69 59.4
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 1.1e-12 76.3 69 53.6
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.4e-12 75.9 68 55.9
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 1.4e-12 75.9 70 54.3
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 1.8e-12 75.5 69 53.6
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 1.8e-12 75.5 69 58.0
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 2.4e-12 75.1 41 82.9
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 3.1e-12 74.7 69 52.2
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 6.9e-12 73.6 70 54.3
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 6.9e-12 73.6 69 55.1
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 6.9e-12 73.6 69 55.1
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 9.0e-12 73.2 69 52.2
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 9.0e-12 73.2 69 56.5
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 1.5e-11 72.4 60 63.3
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 2.6e-11 71.6 70 52.9
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 3.4e-11 71.2 70 54.3
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 3.4e-11 71.2 70 52.9
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 9.9e-11 69.7 69 52.2
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 4.9e-10 67.4 70 52.9
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 8.4e-10 66.6 50 64.0
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 8.4e-10 66.6 69 47.8
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 8.4e-10 66.6 74 48.6
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 1.9e-09 65.5 70 51.4
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 3.2e-09 64.7 50 62.0
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 5.4e-09 63.9 54 51.9
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 7.1e-09 63.5 50 52.0
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 7.1e-09 63.5 41 68.3
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.2e-08 62.8 69 46.4
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 1.6e-08 62.4 44 61.4
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.1e-08 62.0 41 63.4
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.1e-08 62.0 41 63.4
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 2.1e-08 62.0 69 44.9
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 2.7e-08 61.6 66 50.0
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 3.5e-08 61.2 38 65.8
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 4.6e-08 60.8 43 62.8
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 4.6e-08 60.8 69 47.8
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 6.0e-08 60.5 40 62.5
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 7.9e-08 60.1 69 49.3
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 7.9e-08 60.1 39 66.7
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 1.0e-07 59.7 69 47.8
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 1.3e-07 59.3 39 66.7
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.3e-07 59.3 41 63.4
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.3e-07 59.3 65 46.2
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.0e-07 58.2 38 71.1
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 3.9e-07 57.8 44 59.1
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 5.1e-07 57.4 42 59.5
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.5e-06 55.8 37 62.2
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 1.5e-06 55.8 38 65.8
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.5e-06 55.8 38 57.9
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 1.9e-06 55.5 66 51.5
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 2.5e-06 55.1 36 61.1


User provided reference genes

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