Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac6g14169 Beta vulgaris HOM05D007483 ORTHO05D009133 5.0e-90 334.3 159 100.0
Ah.06g191870 Amaranthus hybridus HOM05D007483 ORTHO05D009133 7.8e-43 177.6 157 60.5
AUR62025813 Chenopodium quinoa HOM05D007483 ORTHO05D009133 2.3e-42 176.0 102 79.4
Sopen10g034250 Solanum pennellii HOM05D007483 ORTHO05D009133 2.8e-40 169.1 88 84.1
CAN.G324.11 Capsicum annuum HOM05D007483 ORTHO05D009133 3.6e-40 168.7 156 56.4
Hund10634 Selenicereus undatus HOM05D007483 ORTHO05D009133 3.6e-40 168.7 163 56.4
Sed0013393 Sechium edule HOM05D007483 ORTHO05D009133 6.2e-40 167.9 169 52.1
ClCG04G008120 Citrullus lanatus HOM05D007483 ORTHO05D009133 8.1e-40 167.5 153 54.2
Gohir.A12G221500 Gossypium hirsutum HOM05D007483 ORTHO05D009133 1.1e-39 167.2 145 58.6
QL07p048670 Quercus lobata HOM05D007483 ORTHO05D009133 1.4e-39 166.8 161 57.1
Gohir.D12G223900 Gossypium hirsutum HOM05D007483 ORTHO05D009133 2.3e-39 166.0 90 81.1
Actinidia13151 Actinidia chinensis HOM05D007483 ORTHO05D009133 5.2e-39 164.9 138 60.1
CiPaw.09G194400 Carya illinoinensis HOM05D007483 ORTHO05D009133 5.2e-39 164.9 94 78.7
RcHm_v2.0_Chr3g0466381 Rosa chinensis HOM05D007483 ORTHO05D009133 5.2e-39 164.9 88 83.0
Thecc.05G037700 Theobroma cacao HOM05D007483 ORTHO05D009133 6.8e-39 164.5 138 63.0
FAN09G2152 Fragaria x ananassa HOM05D007483 ORTHO05D009133 8.9e-39 164.1 120 65.0
Dinv35587 Davidia involucrata HOM05D007483 ORTHO05D009133 1.2e-38 163.7 153 57.5
Duzib093G2195 Durio zibethinus HOM05D007483 ORTHO05D009133 1.5e-38 163.3 137 60.6
Manes.08G088800 Manihot esculenta HOM05D007483 ORTHO05D009133 1.5e-38 163.3 86 82.6
FAN14G1457 Fragaria x ananassa HOM05D007483 ORTHO05D009133 3.4e-38 162.2 120 64.2
PSO063G2390 Papaver somniferum HOM05D007483 ORTHO05D009133 7.5e-38 161.0 94 75.5
Nitab4.5_0000216g0380 Nicotiana tabacum HOM05D007483 ORTHO05D009133 9.8e-38 160.6 89 79.8
MSTRG.19078 Avicennia marina HOM05D007483 ORTHO05D009133 1.7e-37 159.8 159 54.7
FAN02G3616 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.7e-37 159.8 120 63.3
Aqoxy1G00916 Aquilegia oxysepala HOM05D007483 ORTHO05D009133 2.2e-37 159.5 162 56.8
Migut.J00322 Erythranthe guttata HOM05D007483 ORTHO05D009133 2.9e-37 159.1 88 77.3
GSVIVG01034153001 Vitis vinifera HOM05D007483 ORTHO05D009133 2.9e-37 159.1 159 54.7
Lsat_1_v5_gn_9_30381 Lactuca sativa HOM05D007483 ORTHO05D009133 3.7e-37 158.7 86 80.2
Aa31LG3G1800 Aethionema arabicum HOM05D007483 ORTHO05D009133 8.3e-37 157.5 131 60.3
FAN05G4215 Fragaria x ananassa HOM05D007483 ORTHO05D009133 1.1e-36 157.1 120 61.7
Cfa016672 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.9e-36 156.4 121 65.3
THA.LOC104816252 Tarenaya hassleriana HOM05D007483 ORTHO05D009133 1.9e-36 156.4 140 55.0
TWI74G0092 Tripterygium wilfordii HOM05D007483 ORTHO05D009133 1.9e-36 156.4 139 59.0
MD12G1143600 Malus domestica HOM05D007483 ORTHO05D009133 2.4e-36 156.0 87 75.9
VMungo0331G1516 Vigna mungo HOM05D007483 ORTHO05D009133 2.4e-36 156.0 143 55.2
Eucgr.A01276 Eucalyptus grandis HOM05D007483 ORTHO05D009133 3.2e-36 155.6 160 54.4
Thhalv10021669m.g Eutrema salsugineum HOM05D007483 ORTHO05D009133 4.1e-36 155.2 159 53.5
Phvul.010G011100 Phaseolus vulgaris HOM05D007483 ORTHO05D009133 4.1e-36 155.2 90 74.4
unitig_744.g24653 Utricularia gibba HOM05D000968 ORTHO05D003096 4.1e-36 155.2 111 64.9
Os11g0706100 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 5.4e-36 154.8 89 74.2
Nn2g13380 Nelumbo nucifera HOM05D007483 ORTHO05D009133 7.1e-36 154.5 104 68.3
Sabra16G0100900 Salix brachista HOM05D007483 ORTHO05D009133 7.1e-36 154.5 86 79.1
SEGI_13406 Sequoiadendron giganteum HOM05D007483 ORTHO05D009133 7.1e-36 154.5 85 78.8
C05p58700 Brassica napus HOM05D007483 ORTHO05D009133 9.2e-36 154.1 86 75.6
BolC5t34519H Brassica oleracea HOM05D007483 ORTHO05D009133 9.2e-36 154.1 86 75.6
PSO339G1657 Papaver somniferum HOM05D007483 ORTHO05D009133 9.2e-36 154.1 94 74.5
Sp3g07690 Schrenkiella parvula HOM05D007483 ORTHO05D009133 9.2e-36 154.1 90 74.4
AT3G09310 Arabidopsis thaliana HOM05D007483 ORTHO05D009133 1.2e-35 153.7 86 75.6
HanXRQChr16g0497811 Helianthus annuus HOM05D007483 ORTHO05D009133 1.2e-35 153.7 134 58.2
CARHR083670 Cardamine hirsuta HOM05D007483 ORTHO05D009133 2.1e-35 152.9 86 75.6
Potri.016G099700 Populus trichocarpa HOM05D007483 ORTHO05D009133 2.1e-35 152.9 81 82.7
Solyc10g084810.3 Solanum lycopersicum HOM05D007483 ORTHO05D009133 2.7e-35 152.5 73 90.4
SGA_v2.0_scaffold126G33776 Striga asiatica HOM05D007483 ORTHO05D009133 3.5e-35 152.1 116 61.2
A05p39660 Brassica napus HOM05D007483 ORTHO05D009133 4.6e-35 151.8 83 78.3
Carub.0003s0842 Capsella rubella HOM05D007483 ORTHO05D009133 4.6e-35 151.8 134 56.0
BcaC05g29659 Brassica carinata HOM05D007483 ORTHO05D009133 6.0e-35 151.4 132 56.8
AL3G20460 Arabidopsis lyrata HOM05D007483 ORTHO05D009133 7.8e-35 151.0 86 72.1
arahy.Tifrunner.gnm1.ann1.A9IP9X Arachis hypogaea HOM05D007483 ORTHO05D009133 7.8e-35 151.0 122 60.7
BcaC05g29522 Brassica carinata HOM05D007483 ORTHO05D009133 7.8e-35 151.0 126 58.7
BraA05t22748Z Brassica rapa HOM05D007483 ORTHO05D009133 7.8e-35 151.0 144 54.2
CANSAT11G2488 Cannabis sativa HOM05D007483 ORTHO05D009133 7.8e-35 151.0 100 68.0
Ca_05061_v3 Cicer arietinum L. HOM05D007483 ORTHO05D009133 7.8e-35 151.0 110 63.6
Prupe.6G257100 Prunus persica HOM05D007483 ORTHO05D009133 7.8e-35 151.0 113 61.1
Cc06_g02530 Coffea canephora HOM05D007483 ORTHO05D009133 1.0e-34 150.6 82 79.3
Lalb_Chr07g0193781 Lupinus albus HOM05D007483 ORTHO05D009133 1.0e-34 150.6 123 56.9
ECA247G0729 Erigeron canadensis HOM05D001424 ORTHO05D009133 1.3e-34 150.2 124 59.7
Zm00001eb164460 Zea mays HOM05D007483 ORTHO05D009133 1.7e-34 149.8 86 74.4
Lj3g0014039 Lotus japonicus HOM05D007483 ORTHO05D009133 3.9e-34 148.7 87 74.7
arahy.Tifrunner.gnm1.ann1.29J2UD Arachis hypogaea HOM05D007483 ORTHO05D009133 8.6e-34 147.5 81 76.5
Cfa017361 Carpinus fangiana HOM05D007483 ORTHO05D009133 1.1e-33 147.1 93 69.9
DCAR_028750 Daucus carota HOM05D007483 ORTHO05D009133 2.5e-33 146.0 73 87.7
Medtr4g021820 Medicago truncatula HOM05D007483 ORTHO05D009133 4.3e-33 145.2 134 53.0
Glyma.03G066000 Glycine max HOM05D007483 ORTHO05D009133 7.3e-33 144.4 97 63.9
Pp3c15_21390 Physcomitrium patens HOM05D007483 ORTHO05D009133 7.3e-33 144.4 151 49.0
TPR.G7337 Trifolium pratense HOM05D007483 ORTHO05D009133 1.6e-32 143.3 80 75.0
Oeu007795.1 Olea europaea HOM05D007483 ORTHO05D009133 6.2e-32 141.4 71 84.5
HPP92_019244 Vanilla planifolia HOM05D007483 ORTHO05D009133 8.1e-32 141.0 89 65.2
Mapoly0019s0017 Marchantia polymorpha HOM05D007483 ORTHO05D009133 6.8e-31 137.9 142 49.3
AagrBONN_evm.TU.Sc2ySwM_228.2371 Anthoceros agrestis HOM05D007483 ORTHO05D009133 1.5e-30 136.7 100 60.0
CBR_g19672 Chara braunii HOM05D007483 ORTHO05D009133 5.8e-30 134.8 83 67.5
PGSC0003DMG400011065 Solanum tuberosum HOM05D007483 ORTHO05D009133 3.7e-29 132.1 134 54.5
Cpa.g.sc169.23 Carica papaya HOM05D007483 ORTHO05D009133 6.4e-29 131.3 150 49.3
Rhsim04G0158000 Rhododendron simsii HOM05D007483 ORTHO05D009133 6.4e-29 131.3 78 75.6
FvH4_6g13510 Fragaria vesca HOM05D007483 ORTHO05D009133 1.1e-28 130.6 66 84.8
Os02g0260400 Oryza sativa ssp. japonica HOM05D007483 ORTHO05D009133 1.9e-28 129.8 66 81.8
Nitab4.5_0000202g0060 Nicotiana tabacum HOM05D007483 ORTHO05D009133 5.4e-28 128.3 69 82.6
MELO3C033192.2 Cucumis melo HOM05D007483 ORTHO05D009133 7.1e-28 127.9 70 81.4
TAR636G3143 Trochodendron aralioides HOM05D007483 ORTHO05D009133 7.1e-28 127.9 69 81.2
Sabra13G0104100 Salix brachista HOM05D007483 ORTHO05D009133 2.7e-27 125.9 69 84.1
MBI05_g28376_MAGBIO Magnolia biondii HOM05D007483 ORTHO05D009133 3.5e-27 125.6 132 53.8
CsaV3_4G025070 Cucumis sativus L. HOM05D007483 ORTHO05D009133 4.6e-27 125.2 144 47.9
ATR0559G251 Amborella trichopoda HOM05D007483 ORTHO05D009133 2.3e-26 122.9 69 78.3
Lj2A93G81 Lonicera japonica HOM05D007483 ORTHO05D009133 2.3e-26 122.9 69 81.2
Peaxi162Scf00094g01112 Petunia axillaris HOM05D007483 ORTHO05D009133 2.5e-25 119.4 74 74.3
Cre17.g720183 Chlamydomonas reinhardtii HOM05D007483 ORTHO05D009133 1.1e-23 114.0 72 63.9
Ciclev10012381m.g Citrus clementina HOM05D007483 ORTHO05D009133 5.8e-22 108.2 159 42.8
SMO165G0096 Selaginella moellendorffii HOM05D007483 ORTHO05D009133 5.8e-22 108.2 66 72.7
PRCOL_00002574 Prasinoderma coloniale HOM05D007483 ORTHO05D009133 1.0e-18 97.4 72 63.9
MCO07G608 Micromonas commoda HOM05D007483 ORTHO05D009133 1.6e-16 90.1 63 52.4
Psat2g094360 Pisum sativum HOM05D007483 ORTHO05D009133 6.4e-13 78.2 49 67.3
Sc20g0003470 Simmondsia chinensis HOM05D007483 ORTHO05D009133 1.1e-09 67.4 97 39.2
CBR_g19673 Chara braunii HOM05D007483 ORTHO05D009133 1.2e-06 57.4 37 62.2


User provided reference genes

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