Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12938 Beta vulgaris HOM05D007361 ORTHO05D009239 2.1e-78 295.8 167 100.0
AUR62019861 Chenopodium quinoa HOM05D007361 ORTHO05D009239 2.2e-43 179.5 171 56.7
Ah.12g052700 Amaranthus hybridus HOM05D007361 ORTHO05D009239 2.3e-37 159.5 169 65.7
Hund14207 Selenicereus undatus HOM05D007361 ORTHO05D009239 9.7e-36 154.1 92 77.2
Sc01g0010390 Simmondsia chinensis HOM05D007361 ORTHO05D009239 2.8e-35 152.5 92 78.3
Cpa.g.sc634.2 Carica papaya HOM05D007361 ORTHO05D009239 5.5e-31 138.3 89 71.9
ClCG07G011490 Citrullus lanatus HOM05D007361 ORTHO05D009239 5.5e-31 138.3 100 66.0
QL02p030053 Quercus lobata HOM05D007361 ORTHO05D009239 5.5e-31 138.3 105 64.8
Aqoxy5G04283 Aquilegia oxysepala HOM05D007361 ORTHO05D009239 9.4e-31 137.5 92 68.5
MELO3C016276.2 Cucumis melo HOM05D007361 ORTHO05D009239 9.4e-31 137.5 81 76.5
CsaV3_4G006730 Cucumis sativus L. HOM05D007361 ORTHO05D009239 1.6e-30 136.7 77 77.9
PGR031G2691 Punica granatum HOM05D007361 ORTHO05D009239 3.6e-30 135.6 99 67.7
GSVIVG01019560001 Vitis vinifera HOM05D007361 ORTHO05D009239 3.6e-30 135.6 97 63.9
Gorai.008G256100 Gossypium raimondii HOM05D007361 ORTHO05D009239 6.1e-30 134.8 96 66.7
Potri.001G089500 Populus trichocarpa HOM05D007361 ORTHO05D009239 6.1e-30 134.8 84 76.2
Actinidia27311 Actinidia chinensis HOM05D007361 ORTHO05D009239 7.9e-30 134.4 67 86.6
Duzib205G2046 Durio zibethinus HOM05D007361 ORTHO05D009239 7.9e-30 134.4 96 65.6
Potri.003G141700 Populus trichocarpa HOM05D007361 ORTHO05D009239 7.9e-30 134.4 81 77.8
Prupe.5G122800 Prunus persica HOM05D007361 ORTHO05D009239 1.0e-29 134.0 70 85.7
Thecc.03G300700 Theobroma cacao HOM05D007361 ORTHO05D009239 1.0e-29 134.0 88 75.0
Lalb_Chr09g0332251 Lupinus albus HOM05D007361 ORTHO05D009239 1.8e-29 133.3 89 73.0
CANSAT21G1668 Cannabis sativa HOM05D007361 ORTHO05D009239 2.3e-29 132.9 70 81.4
Nn1g00257 Nelumbo nucifera HOM05D007361 ORTHO05D009239 3.0e-29 132.5 78 74.4
Sed0017120 Sechium edule HOM05D007361 ORTHO05D009239 3.0e-29 132.5 89 70.8
Lj4g0006418 Lotus japonicus HOM05D007361 ORTHO05D009239 3.9e-29 132.1 76 80.3
Sabra01G0065600 Salix brachista HOM05D007361 ORTHO05D009239 3.9e-29 132.1 65 89.2
Gohir.D12G239000 Gossypium hirsutum HOM05D007361 ORTHO05D009239 5.1e-29 131.7 85 71.8
Os01g0235100 Oryza sativa ssp. japonica HOM05D007361 ORTHO05D009239 5.1e-29 131.7 80 72.5
Sabra03G0102300 Salix brachista HOM05D007361 ORTHO05D009239 5.1e-29 131.7 71 84.5
HPP92_002926 Vanilla planifolia HOM05D007361 ORTHO05D009239 5.1e-29 131.7 92 66.3
FvH4_5g04930 Fragaria vesca HOM05D007361 ORTHO05D009239 6.7e-29 131.3 71 83.1
FAN13G1516 Fragaria x ananassa HOM05D007361 ORTHO05D009239 6.7e-29 131.3 71 83.1
FAN18G1776 Fragaria x ananassa HOM05D007361 ORTHO05D009239 6.7e-29 131.3 71 83.1
Gohir.A12G237900 Gossypium hirsutum HOM05D007361 ORTHO05D009239 6.7e-29 131.3 87 70.1
CiPaw.12G081300 Carya illinoinensis HOM05D007361 ORTHO05D009239 8.8e-29 131.0 73 79.5
PSO782G1801 Papaver somniferum HOM05D007361 ORTHO05D009239 8.8e-29 131.0 93 66.7
FAN18G2902 Fragaria x ananassa HOM05D007361 ORTHO05D009239 1.5e-28 130.2 71 81.7
Glyma.05G218000 Glycine max HOM05D007361 ORTHO05D009239 1.5e-28 130.2 77 75.3
RcHm_v2.0_Chr7g0194141 Rosa chinensis HOM05D007361 ORTHO05D009239 2.0e-28 129.8 70 81.4
THA.LOC104817582 Tarenaya hassleriana HOM05D007361 ORTHO05D009239 2.0e-28 129.8 74 77.0
Dinv37514 Davidia involucrata HOM05D007361 ORTHO05D009239 2.6e-28 129.4 72 80.6
TAR629G1962 Trochodendron aralioides HOM05D007361 ORTHO05D009239 2.6e-28 129.4 91 64.8
arahy.Tifrunner.gnm1.ann1.F7VJVA Arachis hypogaea HOM05D007361 ORTHO05D009239 3.3e-28 129.0 66 84.8
AT5G42070 Arabidopsis thaliana HOM05D007361 ORTHO05D009239 4.4e-28 128.6 87 67.8
Ciclev10024054m.g Citrus clementina HOM05D007361 ORTHO05D009239 4.4e-28 128.6 79 72.2
Eucgr.D01759 Eucalyptus grandis HOM05D007361 ORTHO05D009239 4.4e-28 128.6 93 66.7
Atru.chr9.1927 Acer truncatum HOM05D001889 ORTHO05D009239 7.4e-28 127.9 71 81.7
arahy.Tifrunner.gnm1.ann1.LM2PGP Arachis hypogaea HOM05D007361 ORTHO05D009239 7.4e-28 127.9 66 84.8
Haze_09090 Corylus avellana HOM05D007361 ORTHO05D009239 9.7e-28 127.5 65 86.2
Manes.01G052200 Manihot esculenta HOM05D007361 ORTHO05D009239 9.7e-28 127.5 88 69.3
TWI60G0282 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 9.7e-28 127.5 64 85.9
Glyma.08G024100 Glycine max HOM05D007361 ORTHO05D009239 1.3e-27 127.1 68 80.9
Nitab4.5_0008496g0040 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.3e-27 127.1 96 67.7
Cc08_g16280 Coffea canephora HOM05D007361 ORTHO05D009239 1.7e-27 126.7 103 56.3
Phvul.002G299900 Phaseolus vulgaris HOM05D007361 ORTHO05D009239 1.7e-27 126.7 102 59.8
vmacro11341 Vaccinium macrocarpon HOM05D007361 ORTHO05D009239 1.7e-27 126.7 66 83.3
Medtr8g099615 Medicago truncatula HOM05D007361 ORTHO05D009239 2.2e-27 126.3 88 65.9
Psat7g024200 Pisum sativum HOM05D007361 ORTHO05D009239 2.2e-27 126.3 68 79.4
A07p21120 Brassica napus HOM05D007361 ORTHO05D009239 2.8e-27 125.9 90 64.4
BraA07t29798Z Brassica rapa HOM05D007361 ORTHO05D009239 2.8e-27 125.9 90 64.4
Actinidia22174 Actinidia chinensis HOM05D005144 ORTHO05D006112 3.7e-27 125.6 91 65.9
TWI81G0394 Tripterygium wilfordii HOM05D007361 ORTHO05D009239 3.7e-27 125.6 64 85.9
ATR0602G025 Amborella trichopoda HOM05D007361 ORTHO05D009239 4.8e-27 125.2 72 77.8
Carub.0007s3327 Capsella rubella HOM05D007361 ORTHO05D009239 4.8e-27 125.2 95 63.2
Thhalv10026457m.g Eutrema salsugineum HOM05D007361 ORTHO05D009239 4.8e-27 125.2 89 64.0
SEGI_33878 Sequoiadendron giganteum HOM05D007361 ORTHO05D009239 6.3e-27 124.8 136 48.5
BcaC08g44581 Brassica carinata HOM05D007361 ORTHO05D009239 8.2e-27 124.4 77 71.4
C06p20480 Brassica napus HOM05D007361 ORTHO05D009239 8.2e-27 124.4 77 71.4
BolC6t37229H Brassica oleracea HOM05D000331 ORTHO05D000732 8.2e-27 124.4 77 71.4
BcaC02g08893 Brassica carinata HOM05D007361 ORTHO05D009239 1.1e-26 124.0 69 78.3
C04p49390 Brassica napus HOM05D007361 ORTHO05D009239 1.1e-26 124.0 69 78.3
CSS0025387 Camellia sinensis var. sinensis HOM05D007361 ORTHO05D009239 1.1e-26 124.0 68 82.4
CDE10G0162 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.1e-26 124.0 78 69.2
Aa31LG9G130 Aethionema arabicum HOM05D007361 ORTHO05D009239 1.4e-26 123.6 95 63.2
CARHR212500 Cardamine hirsuta HOM05D007361 ORTHO05D009239 1.4e-26 123.6 90 62.2
CDE10G0255 Ceratophyllum demersum HOM05D007361 ORTHO05D009239 1.4e-26 123.6 78 69.2
Ca_17469_v3 Cicer arietinum L. HOM05D007361 ORTHO05D009239 1.4e-26 123.6 92 62.0
Lj2C163G16 Lonicera japonica HOM05D005144 ORTHO05D006112 1.4e-26 123.6 67 83.6
Nitab4.5_0000798g0080 Nicotiana tabacum HOM05D007361 ORTHO05D009239 1.4e-26 123.6 84 72.6
BcaB02g07865 Brassica carinata HOM05D007361 ORTHO05D009239 1.8e-26 123.2 77 71.4
Migut.E01281 Erythranthe guttata HOM05D007361 ORTHO05D009239 1.8e-26 123.2 69 78.3
TPR.G3427 Trifolium pratense HOM05D007361 ORTHO05D009239 1.8e-26 123.2 93 62.4
unitig_0.g323 Utricularia gibba HOM05D007361 ORTHO05D009239 1.8e-26 123.2 74 71.6
BolC4t26525H Brassica oleracea HOM05D000331 ORTHO05D000732 2.4e-26 122.9 69 76.8
Peaxi162Scf00074g00624 Petunia axillaris HOM05D007361 ORTHO05D009239 3.1e-26 122.5 102 61.8
Sp7g00060 Schrenkiella parvula HOM05D007361 ORTHO05D009239 3.1e-26 122.5 90 63.3
SGA_v2.0_scaffold111G31398 Striga asiatica HOM05D007361 ORTHO05D009239 4.1e-26 122.1 73 75.3
DCAR_006523 Daucus carota HOM05D007361 ORTHO05D009239 5.3e-26 121.7 87 65.5
SalBow8G1606 Salvia bowleyana HOM05D007361 ORTHO05D009239 9.1e-26 120.9 67 79.1
MSTRG.1799 Avicennia marina HOM05D007361 ORTHO05D009239 2.6e-25 119.4 88 63.6
ECA246G3595 Erigeron canadensis HOM05D007361 ORTHO05D009239 2.6e-25 119.4 99 57.6
Rhsim02G0246000 Rhododendron simsii HOM05D007361 ORTHO05D009239 5.9e-25 118.2 89 64.0
HanXRQChr17g0534961 Helianthus annuus HOM05D007361 ORTHO05D009239 1.0e-24 117.5 78 67.9
Solyc08g082570.4 Solanum lycopersicum HOM05D007361 ORTHO05D009239 1.0e-24 117.5 102 59.8
Sopen08g030820 Solanum pennellii HOM05D007361 ORTHO05D009239 1.0e-24 117.5 105 59.0
PGSC0003DMG400012265 Solanum tuberosum HOM05D007361 ORTHO05D009239 1.7e-24 116.7 91 64.8
A04p15160 Brassica napus HOM05D007361 ORTHO05D009239 2.2e-24 116.3 70 74.3
CAN.G567.14 Capsicum annuum HOM05D007361 ORTHO05D009239 2.9e-24 115.9 93 63.4
AagrBONN_evm.TU.Sc2ySwM_362.1194 Anthoceros agrestis HOM05D007361 ORTHO05D009239 5.5e-23 111.7 72 66.7
Mapoly0039s0013 Marchantia polymorpha HOM05D007361 ORTHO05D009239 9.4e-23 110.9 79 62.0
Pp3c20_23090 Physcomitrium patens HOM05D007361 ORTHO05D009239 3.6e-22 109.0 84 57.1
SMO340G0222 Selaginella moellendorffii HOM05D007361 ORTHO05D009239 4.7e-22 108.6 69 65.2
Lsat_1_v5_gn_3_11260 Lactuca sativa HOM05D007361 ORTHO05D009239 9.7e-20 100.9 56 75.0
CBR_g8730 Chara braunii HOM05D003343 ORTHO05D003787 1.8e-18 96.7 64 64.1
Cre02.g074100 Chlamydomonas reinhardtii HOM05D007361 ORTHO05D009239 3.6e-14 82.4 66 50.0
MCO14G090 Micromonas commoda HOM05D007361 ORTHO05D009239 3.0e-13 79.3 63 52.4
PRCOL_00001131 Prasinoderma coloniale HOM05D007361 ORTHO05D009239 1.5e-07 60.5 53 45.3


User provided reference genes

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