Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 4.8e-290 1000.7 622 100.0
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 7.5e-166 588.2 588 71.9
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 4.5e-155 552.4 611 66.1
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 7.8e-147 525.0 617 64.8
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 5.6e-145 518.8 615 63.1
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 1.7e-133 480.7 604 56.6
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 1.6e-128 464.2 638 47.8
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.6e-128 464.2 602 57.5
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 1.4e-127 461.1 608 59.0
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 3.8e-125 453.0 608 58.9
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 9.2e-124 448.4 598 58.5
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.1e-123 447.2 647 47.3
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.6e-123 446.0 632 44.9
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 3.9e-122 443.0 612 47.7
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 2.5e-121 440.3 628 48.1
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 4.3e-121 439.5 602 52.5
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 7.3e-121 438.7 637 41.6
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 7.3e-121 438.7 639 50.4
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 1.5e-118 431.0 616 55.0
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 3.4e-118 429.9 607 57.3
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 2.2e-117 427.2 604 57.0
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 2.9e-117 426.8 609 56.5
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 8.4e-117 425.2 637 46.3
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 4.6e-115 419.5 603 51.1
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 3.0e-114 416.8 616 53.9
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 6.6e-114 415.6 601 56.1
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 8.7e-114 415.2 598 55.7
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 3.3e-113 413.3 606 56.9
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 7.3e-113 412.1 606 55.4
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 3.6e-112 409.8 608 54.1
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 6.2e-112 409.1 601 52.7
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 2.6e-110 403.7 646 50.3
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.7e-109 401.0 615 53.0
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 2.4e-108 397.1 608 54.4
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 7.1e-108 395.6 598 47.3
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.6e-107 394.4 643 44.8
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.6e-107 394.4 598 53.2
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 1.6e-107 394.4 598 52.8
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 2.7e-107 393.7 596 51.0
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 8.7e-106 388.7 600 54.0
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 8.7e-106 388.7 611 52.0
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.1e-105 388.3 636 49.2
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 1.8e-103 380.9 609 54.5
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 4.0e-103 379.8 618 53.4
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 5.3e-103 379.4 604 52.8
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 5.3e-103 379.4 604 52.8
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.2e-102 378.3 567 52.4
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.7e-101 374.4 637 51.0
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 6.4e-101 372.5 626 51.6
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.1e-100 371.7 603 48.3
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 1.9e-100 370.9 606 53.8
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 3.2e-100 370.2 559 53.3
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 1.6e-99 367.9 599 45.4
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 2.1e-99 367.5 630 51.0
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 7.9e-99 365.5 620 44.2
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 1.3e-98 364.8 605 52.7
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 1.9e-97 360.9 605 50.6
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 1.9e-97 360.9 605 50.6
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 2.4e-95 354.0 605 50.2
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 3.1e-95 353.6 599 51.9
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 2.6e-94 350.5 599 51.8
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 5.8e-94 349.4 599 52.4
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 3.2e-92 343.6 480 59.0
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 9.3e-92 342.0 633 44.2
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 2.1e-91 340.9 606 50.8
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 3.5e-91 340.1 619 49.8
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 6.0e-91 339.3 584 48.1
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.0e-90 338.6 549 54.6
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 1.3e-90 338.2 480 60.0
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 3.0e-90 337.0 382 54.7
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 5.1e-90 336.3 606 43.4
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 3.3e-89 333.6 622 50.5
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.1e-87 328.6 606 50.0
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 1.4e-87 328.2 613 48.8
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 2.4e-87 327.4 617 46.8
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 3.1e-87 327.0 609 48.9
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 3.6e-83 313.5 539 51.6
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 3.0e-82 310.5 615 47.0
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 2.5e-81 307.4 614 47.7
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.5e-81 307.4 413 50.4
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.1e-76 292.0 632 37.7
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.1e-76 292.0 632 37.7
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 1.2e-75 288.5 520 47.7
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 8.8e-74 282.3 563 40.9
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 2.0e-73 281.2 627 39.1
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 6.3e-72 276.2 600 44.5
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 1.4e-71 275.0 617 46.2
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 6.5e-69 266.2 616 45.0
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 8.5e-69 265.8 599 40.1
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 2.5e-68 264.2 621 46.1
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 3.6e-67 260.4 611 44.7
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.3e-66 257.7 600 45.8
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 1.1e-65 255.4 540 45.2
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.5e-65 255.0 602 45.5
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 7.0e-63 246.1 601 39.1
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 2.0e-62 244.6 390 51.8
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 2.0e-62 244.6 619 44.1
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.0e-61 242.3 568 47.5
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 1.7e-61 241.5 617 39.7
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 3.2e-60 237.3 624 29.0
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 9.4e-60 235.7 547 45.9
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 4.2e-52 210.3 607 42.8
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 5.7e-49 199.9 524 37.2
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.4e-34 152.1 329 34.3
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 9.2e-31 139.4 331 45.9
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.2e-30 139.0 157 51.0
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 4.1e-23 114.0 157 43.9
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 3.9e-21 107.5 220 45.0
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 9.2e-15 86.3 175 33.1
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.3e-13 82.4 197 53.8
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 4.3e-12 77.4 195 29.7
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 1.4e-10 72.4 52 73.1
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 4.0e-10 70.9 52 71.2
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 3.8e-08 64.3 48 66.7
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.4e-07 62.4 89 40.4


User provided reference genes

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