Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12905 Beta vulgaris HOM05D004439 ORTHO05D005670 2.7e-274 948.0 457 100.0
AUR62019828 Chenopodium quinoa HOM05D004439 ORTHO05D005670 3.4e-232 808.1 461 84.2
AUR62010830 Chenopodium quinoa HOM05D004439 ORTHO05D005670 8.3e-231 803.5 457 84.2
Hund11394 Selenicereus undatus HOM05D004439 ORTHO05D005670 1.2e-226 789.6 457 82.9
Sc01g0010250 Simmondsia chinensis HOM05D004439 ORTHO05D005670 1.2e-226 789.6 458 80.6
TAR629G1063 Trochodendron aralioides HOM05D004439 ORTHO05D005670 1.1e-225 786.6 457 80.3
Cfa023584 Carpinus fangiana HOM05D004439 ORTHO05D005670 6.8e-225 783.9 457 79.4
Duzib205G1996 Durio zibethinus HOM05D004439 ORTHO05D005670 4.1e-222 774.6 457 78.3
CSS0017274 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 3.5e-221 771.5 457 77.9
CSS0021285 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 3.5e-221 771.5 457 77.9
vmacro13901 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 3.5e-221 771.5 457 78.6
Dinv38840 Davidia involucrata HOM05D004439 ORTHO05D005670 4.6e-221 771.2 457 79.2
Ah.12g052480 Amaranthus hybridus HOM05D004439 ORTHO05D005670 6.0e-221 770.8 467 80.9
CANSAT21G0267 Cannabis sativa HOM05D004439 ORTHO05D005670 2.3e-220 768.8 457 79.6
Gohir.D12G237200 Gossypium hirsutum HOM05D004439 ORTHO05D005670 3.0e-220 768.5 457 77.2
Thecc.03G296500 Theobroma cacao HOM05D004439 ORTHO05D005670 3.0e-220 768.5 457 77.9
COL.COLO4_10686 Corchorus olitorius HOM05D004439 ORTHO05D005670 3.9e-220 768.1 471 76.9
Gorai.008G253800 Gossypium raimondii HOM05D004439 ORTHO05D005670 1.9e-219 765.8 457 77.0
Duzib084G1213 Durio zibethinus HOM05D004439 ORTHO05D005670 3.3e-219 765.0 464 76.9
Atru.chr9.2010 Acer truncatum HOM05D004439 ORTHO05D005670 1.2e-218 763.1 457 78.8
Nn2g14269 Nelumbo nucifera HOM05D004439 ORTHO05D005670 2.1e-218 762.3 451 78.9
TWI81G0104 Tripterygium wilfordii HOM05D004439 ORTHO05D005670 1.8e-217 759.2 457 77.7
CiPaw.11G122200 Carya illinoinensis HOM05D004439 ORTHO05D005670 8.9e-217 756.9 460 77.6
MBI07_g27257_MAGBIO Magnolia biondii HOM05D004439 ORTHO05D005670 2.6e-216 755.4 457 76.6
GSVIVG01019518001 Vitis vinifera HOM05D004439 ORTHO05D005670 1.3e-215 753.1 448 79.0
Prupe.5G117700 Prunus persica HOM05D004439 ORTHO05D005670 5.4e-214 747.7 459 76.5
QL02p030851 Quercus lobata HOM05D004439 ORTHO05D005670 5.4e-214 747.7 459 76.7
Ciclev10020115m.g Citrus clementina HOM05D004439 ORTHO05D005670 1.2e-213 746.5 457 77.0
Manes.11G128600 Manihot esculenta HOM05D004439 ORTHO05D005670 3.5e-213 745.0 453 76.4
Potri.003G104700 Populus trichocarpa HOM05D004439 ORTHO05D005670 3.9e-212 741.5 457 76.4
Peaxi162Scf00074g01028 Petunia axillaris HOM05D004439 ORTHO05D005670 5.1e-212 741.1 457 76.8
Sopen08g030490 Solanum pennellii HOM05D004439 ORTHO05D005670 1.1e-211 740.0 458 75.8
vmacro05785 Vaccinium macrocarpon HOM05D004439 ORTHO05D005670 1.8e-209 732.6 444 77.3
Solyc08g082200.3 Solanum lycopersicum HOM05D004439 ORTHO05D005670 2.4e-209 732.3 458 75.1
CsaV3_5G039570 Cucumis sativus L. HOM05D004439 ORTHO05D005670 3.4e-208 728.4 457 76.1
Eucgr.E00854 Eucalyptus grandis HOM05D004439 ORTHO05D005670 3.4e-208 728.4 461 73.5
CAN.G532.113 Capsicum annuum HOM05D004439 ORTHO05D005670 3.8e-207 724.9 458 73.8
MD06G1105400 Malus domestica HOM05D004439 ORTHO05D005670 4.2e-206 721.5 447 76.3
MSTRG.1809 Avicennia marina HOM05D004439 ORTHO05D005670 1.2e-205 719.9 457 73.3
Cc08_g15970 Coffea canephora HOM05D004439 ORTHO05D005670 4.6e-205 718.0 458 74.7
RcHm_v2.0_Chr7g0195041 Rosa chinensis HOM05D004439 ORTHO05D005670 4.6e-205 718.0 446 75.3
SalBow1G1193 Salvia bowleyana HOM05D004439 ORTHO05D005670 4.6e-205 718.0 455 74.1
Rhsim07G0082800 Rhododendron simsii HOM05D004439 ORTHO05D005670 7.8e-205 717.2 438 76.5
Lalb_Chr16g0376971 Lupinus albus HOM05D004439 ORTHO05D005670 1.3e-204 716.5 450 74.4
Sed0005226 Sechium edule HOM05D004439 ORTHO05D005670 1.1e-203 713.4 457 74.6
Migut.A00663 Erythranthe guttata HOM05D004439 ORTHO05D005670 1.5e-203 713.0 457 74.0
Lj1g0018659 Lotus japonicus HOM05D004439 ORTHO05D005670 1.5e-203 713.0 427 77.8
Aqoxy5G04196 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 1.9e-203 712.6 457 74.2
Phvul.009G207100 Phaseolus vulgaris HOM05D004439 ORTHO05D005670 1.9e-203 712.6 427 77.5
arahy.Tifrunner.gnm1.ann1.X9M6Z3 Arachis hypogaea HOM05D004439 ORTHO05D005670 7.3e-203 710.7 458 72.7
arahy.Tifrunner.gnm1.ann1.FA9VAL Arachis hypogaea HOM05D004439 ORTHO05D005670 2.1e-202 709.1 458 72.5
VMungo0647G0731 Vigna mungo HOM05D004439 ORTHO05D005670 6.2e-202 707.6 427 77.0
Glyma.02G286600 Glycine max HOM05D004439 ORTHO05D005670 8.1e-202 707.2 428 76.9
arahy.Tifrunner.gnm1.ann1.URL0E3 Arachis hypogaea HOM05D004439 ORTHO05D005670 1.1e-201 706.8 458 72.3
FvH4_5g04460 Fragaria vesca HOM05D004439 ORTHO05D005670 1.1e-201 706.8 439 75.2
Nitab4.5_0001231g0030 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.1e-201 706.8 464 72.4
Ca_15083_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 2.4e-201 705.7 427 76.6
DCAR_006321 Daucus carota HOM05D004439 ORTHO05D005670 2.4e-201 705.7 453 74.4
Medtr3g062490 Medicago truncatula HOM05D004439 ORTHO05D005670 4.0e-201 704.9 427 76.3
Psat5g147560 Pisum sativum HOM05D004439 ORTHO05D005670 4.5e-200 701.4 427 75.9
Lsat_1_v5_gn_6_12240 Lactuca sativa HOM05D004439 ORTHO05D005670 5.8e-200 701.0 433 76.0
FAN18G4375 Fragaria x ananassa HOM05D004439 ORTHO05D005670 9.9e-200 700.3 466 71.5
FAN18G2355 Fragaria x ananassa HOM05D004439 ORTHO05D005670 2.7e-197 692.2 467 70.9
ATR0320G020 Amborella trichopoda HOM05D004439 ORTHO05D005670 6.0e-197 691.0 451 71.0
HanXRQChr05g0138501 Helianthus annuus HOM05D004439 ORTHO05D005670 6.0e-197 691.0 457 72.6
Ca_15072_v3 Cicer arietinum L. HOM05D004439 ORTHO05D005670 3.0e-196 688.7 453 71.7
unitig_92.g28124 Utricularia gibba HOM05D004439 ORTHO05D005670 3.0e-196 688.7 452 71.7
arahy.Tifrunner.gnm1.ann1.B833UN Arachis hypogaea HOM05D004439 ORTHO05D005670 3.9e-196 688.3 473 69.3
FAN13G1146 Fragaria x ananassa HOM05D004439 ORTHO05D005670 6.7e-196 687.6 438 73.3
HanXRQChr06g0184201 Helianthus annuus HOM05D004439 ORTHO05D005670 1.9e-195 686.0 457 72.4
FAN04G2433 Fragaria x ananassa HOM05D004439 ORTHO05D005670 1.3e-194 683.3 458 70.5
Lj8C209T4 Lonicera japonica HOM05D004439 ORTHO05D005670 2.1e-194 682.6 394 79.4
Cpa.g.sc79.44 Carica papaya HOM05D004439 ORTHO05D005670 2.8e-194 682.2 438 74.0
THA.LOC104809335 Tarenaya hassleriana HOM05D004439 ORTHO05D005670 3.6e-194 681.8 473 68.5
FAN08G0613 Fragaria x ananassa HOM05D004439 ORTHO05D005670 8.1e-194 680.6 459 70.6
Carub.0007s3348 Capsella rubella HOM05D004439 ORTHO05D005670 4.0e-193 678.3 457 67.4
AL7G47340 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.3e-191 673.3 458 68.6
Actinidia27332 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.7e-191 672.9 457 71.3
Sp7g00230 Schrenkiella parvula HOM05D004439 ORTHO05D005670 2.2e-191 672.5 459 67.5
ECA233G4302 Erigeron canadensis HOM05D004439 ORTHO05D005670 2.9e-191 672.2 458 71.4
SGA_v2.0_scaffold305G47954 Striga asiatica HOM05D004439 ORTHO05D005670 2.9e-191 672.2 494 66.0
Thhalv10027750m.g Eutrema salsugineum HOM05D004439 ORTHO05D005670 8.4e-191 670.6 458 69.0
AT5G41880 Arabidopsis thaliana HOM05D004439 ORTHO05D005670 3.2e-190 668.7 458 67.7
CARHR212680 Cardamine hirsuta HOM05D004439 ORTHO05D005670 1.6e-189 666.4 459 67.8
A04p15000 Brassica napus HOM05D004439 ORTHO05D005670 1.3e-188 663.3 461 67.0
Aqoxy1G01152 Aquilegia oxysepala HOM05D004439 ORTHO05D005670 6.7e-188 661.0 408 76.5
BraA04t17145Z Brassica rapa HOM05D004439 ORTHO05D005670 1.1e-187 660.2 461 66.6
BcaC02g08908 Brassica carinata HOM05D004439 ORTHO05D005670 1.6e-186 656.4 459 66.2
PSO384G1647 Papaver somniferum HOM05D004439 ORTHO05D005670 2.8e-186 655.6 461 69.0
BcaB02g07872 Brassica carinata HOM05D004439 ORTHO05D005670 1.1e-185 653.7 461 67.0
C04p49290 Brassica napus HOM05D004439 ORTHO05D005670 1.4e-185 653.3 461 66.2
BolC4t26514H Brassica oleracea HOM05D004439 ORTHO05D005670 1.4e-185 653.3 461 66.2
CDE02G4298 Ceratophyllum demersum HOM05D004439 ORTHO05D005670 2.6e-184 649.0 464 66.6
PSO339G0633 Papaver somniferum HOM05D004439 ORTHO05D005670 7.6e-184 647.5 462 69.0
C06p20300 Brassica napus HOM05D004439 ORTHO05D005670 4.2e-182 641.7 461 66.2
Sabra03G0071700 Salix brachista HOM05D004439 ORTHO05D005670 5.5e-182 641.3 488 65.6
Oeu063530.1 Olea europaea HOM05D004439 ORTHO05D005670 3.9e-180 635.2 395 75.7
Gohir.A12G236000 Gossypium hirsutum HOM05D004439 ORTHO05D005670 6.7e-180 634.4 368 78.5
Lj8A194T41 Lonicera japonica HOM05D004439 ORTHO05D005670 1.8e-177 626.3 384 76.0
HPP92_001766 Vanilla planifolia HOM05D004439 ORTHO05D005670 3.4e-176 622.1 456 66.0
BcaB06g27677 Brassica carinata HOM05D004439 ORTHO05D005670 1.0e-175 620.5 469 63.5
HPP92_001588 Vanilla planifolia HOM05D004439 ORTHO05D005670 3.6e-173 612.1 450 65.8
Mapoly0061s0010 Marchantia polymorpha HOM05D004439 ORTHO05D005670 1.0e-172 610.5 449 65.5
A07p20990 Brassica napus HOM05D004439 ORTHO05D005670 3.1e-169 599.0 489 60.1
Aa31LG9G280 Aethionema arabicum HOM05D004439 ORTHO05D005670 1.1e-166 590.5 424 65.8
Nitab4.5_0008661g0010 Nicotiana tabacum HOM05D004439 ORTHO05D005670 1.2e-165 587.0 443 66.4
BcaC08g44563 Brassica carinata HOM05D004439 ORTHO05D005670 2.1e-165 586.3 403 68.2
DCAR_029884 Daucus carota HOM05D004439 ORTHO05D005670 2.7e-165 585.9 380 75.0
Haze_08623 Corylus avellana HOM05D004439 ORTHO05D005670 1.4e-164 583.6 420 67.1
ClCG08G001530 Citrullus lanatus HOM05D004439 ORTHO05D005670 1.8e-164 583.2 540 57.6
Rhsim09G0008900 Rhododendron simsii HOM05D004439 ORTHO05D005670 1.1e-163 580.5 473 61.3
Pp3c9_1070 Physcomitrium patens HOM05D004439 ORTHO05D005670 1.9e-158 563.1 444 59.9
CBR_g51004 Chara braunii HOM05D004439 ORTHO05D005670 1.5e-155 553.5 436 58.5
CBR_g30932 Chara braunii HOM05D004439 ORTHO05D005670 1.7e-154 550.1 435 59.1
AagrBONN_evm.TU.Sc2ySwM_117.2781 Anthoceros agrestis HOM05D004439 ORTHO05D005670 5.9e-152 541.6 438 59.4
arahy.Tifrunner.gnm1.ann1.4X43I0 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.4e-145 519.6 351 69.5
BcaNung06856 Brassica carinata HOM05D004439 ORTHO05D005670 1.7e-138 496.9 482 54.6
TPR.G13893 Trifolium pratense HOM05D004439 ORTHO05D005670 3.1e-137 492.7 427 57.1
SHI03128 Sapria himalayana HOM05D004439 ORTHO05D005670 1.7e-130 470.3 464 53.0
Glyma.14G028200 Glycine max HOM05D004439 ORTHO05D005670 1.6e-128 463.8 290 75.5
Lj2A169G40 Lonicera japonica HOM05D004439 ORTHO05D005670 7.3e-126 454.9 334 68.3
Zm00001eb346380 Zea mays HOM05D004439 ORTHO05D005670 2.9e-122 443.0 290 72.8
SMO361G0316 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.8e-121 440.3 347 61.1
SMO361G0219 Selaginella moellendorffii HOM05D004439 ORTHO05D005670 1.2e-120 437.6 347 60.5
CSS0041217 Camellia sinensis var. sinensis HOM05D004439 ORTHO05D005670 6.6e-119 431.8 488 52.5
arahy.Tifrunner.gnm1.ann1.JNH9P6 Arachis hypogaea HOM05D004439 ORTHO05D005670 2.5e-118 429.9 412 56.6
MD14G1127500 Malus domestica HOM05D004439 ORTHO05D005670 1.9e-113 413.7 273 71.1
Cre07.g312350 Chlamydomonas reinhardtii HOM05D004439 ORTHO05D005670 8.6e-111 404.8 376 52.1
PRCOL_00003494 Prasinoderma coloniale HOM05D004439 ORTHO05D005670 2.5e-94 350.1 450 42.0
RcHm_v2.0_Chr6g0245381 Rosa chinensis HOM05D004439 ORTHO05D005670 1.2e-93 347.8 212 73.6
Cfa025390 Carpinus fangiana HOM05D004439 ORTHO05D005670 5.2e-92 342.4 441 42.0
RcHm_v2.0_Chr5g0068871 Rosa chinensis HOM05D004439 ORTHO05D005670 2.1e-88 330.5 280 61.8
RcHm_v2.0_Chr6g0245391 Rosa chinensis HOM05D004439 ORTHO05D005670 6.2e-85 318.9 213 72.8
TPR.G191 Trifolium pratense HOM05D004439 ORTHO05D005670 1.0e-71 275.0 178 73.6
MELO3C027184.2 Cucumis melo HOM05D004439 ORTHO05D005670 2.3e-55 220.7 119 82.4
TPR.G9934 Trifolium pratense HOM05D004439 ORTHO05D005670 2.3e-55 220.7 230 56.1
PSO063G0793 Papaver somniferum HOM05D004439 ORTHO05D005670 1.9e-54 217.6 182 58.2
SEGI_14966 Sequoiadendron giganteum HOM05D004439 ORTHO05D005670 1.7e-53 214.5 194 54.6
AL3G52130 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.7e-45 188.0 241 47.7
MELO3C031246.2 Cucumis melo HOM05D004439 ORTHO05D005670 4.8e-45 186.4 157 60.5
AL1G55640 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 2.4e-44 184.1 239 47.7
PGSC0003DMG400012290 Solanum tuberosum HOM05D004439 ORTHO05D005670 2.7e-40 170.6 234 41.0
Os05g0358200 Oryza sativa ssp. japonica HOM05D004439 ORTHO05D005670 4.1e-36 156.8 85 80.0
TPR.G9939 Trifolium pratense HOM05D004439 ORTHO05D005670 2.0e-35 154.5 197 44.7
MD14G1127600 Malus domestica HOM05D004439 ORTHO05D005670 2.6e-35 154.1 109 67.9
TPR.G3794 Trifolium pratense HOM05D004439 ORTHO05D005670 6.1e-32 142.9 94 72.3
AL2G23180 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.4e-31 141.7 239 41.0
AL1G44430 Arabidopsis lyrata HOM05D004439 ORTHO05D005670 1.2e-24 118.6 85 69.4
MD06G1072700 Malus domestica HOM05D004439 ORTHO05D005670 1.7e-21 108.2 62 79.0
SEGI_35904 Sequoiadendron giganteum HOM05D004439 ORTHO05D000007 1.2e-19 102.1 135 40.0
Lj2A169G39 Lonicera japonica HOM05D004439 ORTHO05D005670 5.0e-18 96.7 71 62.0
TPR.G22107 Trifolium pratense HOM05D004439 ORTHO05D005670 8.6e-18 95.9 70 67.1
Actinidia27323 Actinidia chinensis HOM05D004439 ORTHO05D005670 2.6e-14 84.3 80 60.0
Actinidia22721 Actinidia chinensis HOM05D004439 ORTHO05D057326 5.6e-09 66.6 64 59.4
Actinidia27324 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.6e-08 65.1 36 80.6
Ah.02g112160 Amaranthus hybridus HOM05D015883 ORTHO05D005553 3.6e-08 63.9 42 73.8
Actinidia27321 Actinidia chinensis HOM05D004439 ORTHO05D005670 1.8e-07 61.6 38 71.1


User provided reference genes

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