Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12903 Beta vulgaris HOM05D007275 ORTHO05D009279 2.0e-46 188.7 96 100.0
AUR62010827 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.0e-42 174.9 96 91.7
Sc01g0010220 Simmondsia chinensis HOM05D007275 ORTHO05D009279 1.9e-36 155.6 96 81.2
Nn1g01839 Nelumbo nucifera HOM05D007275 ORTHO05D009279 2.5e-36 155.2 96 79.2
CAN.G532.107 Capsicum annuum HOM05D007275 ORTHO05D009279 5.6e-36 154.1 96 77.1
PGSC0003DMG400012158 Solanum tuberosum HOM05D007275 ORTHO05D009279 5.6e-36 154.1 96 78.1
Nitab4.5_0010144g0020 Nicotiana tabacum HOM05D007275 ORTHO05D009279 9.5e-36 153.3 96 78.1
Nn3g19047 Nelumbo nucifera HOM05D007275 ORTHO05D009279 1.2e-35 152.9 96 78.1
Actinidia22145 Actinidia chinensis HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 79.2
Dinv38844 Davidia involucrata HOM05D007275 ORTHO05D009279 2.1e-35 152.1 96 77.1
Hma1.2p1_0359F.1_g135280 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.7e-35 151.0 96 77.1
Peaxi162Scf00074g01033 Petunia axillaris HOM05D007275 ORTHO05D009279 4.7e-35 151.0 95 76.8
Manes.02G011100 Manihot esculenta HOM05D007275 ORTHO05D009279 6.1e-35 150.6 95 77.9
MD14G1123400 Malus domestica HOM05D007275 ORTHO05D009279 1.0e-34 149.8 96 76.0
Nitab4.5_0000223g0330 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.0e-34 149.8 96 76.0
GSVIVG01019513001 Vitis vinifera HOM05D007275 ORTHO05D009279 1.0e-34 149.8 96 77.1
Eucgr.D01727 Eucalyptus grandis HOM05D007275 ORTHO05D009279 3.1e-34 148.3 96 76.0
Cc08_g15930 Coffea canephora HOM05D007275 ORTHO05D009279 4.0e-34 147.9 96 75.0
Gohir.D12G236900 Gossypium hirsutum HOM05D007275 ORTHO05D009279 4.0e-34 147.9 96 77.1
Gorai.008G253500 Gossypium raimondii HOM05D007275 ORTHO05D009279 4.0e-34 147.9 96 77.1
Thecc.03G296000 Theobroma cacao HOM05D007275 ORTHO05D009279 4.0e-34 147.9 96 77.1
QL02p030913 Quercus lobata HOM05D007275 ORTHO05D009279 5.2e-34 147.5 95 74.7
Cfa012796 Carpinus fangiana HOM05D007275 ORTHO05D009279 6.8e-34 147.1 95 75.8
Potri.001G092700 Populus trichocarpa HOM05D007275 ORTHO05D009279 6.8e-34 147.1 94 76.6
Prupe.5G117300 Prunus persica HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 75.0
TAR375G1117 Trochodendron aralioides HOM05D007275 ORTHO05D009279 6.8e-34 147.1 96 76.0
Gohir.A12G235700 Gossypium hirsutum HOM05D007275 ORTHO05D009279 8.9e-34 146.7 96 76.0
Peaxi162Scf00117g01123 Petunia axillaris HOM05D007275 ORTHO05D009279 8.9e-34 146.7 96 72.9
TAR629G0721 Trochodendron aralioides HOM05D007275 ORTHO05D010861 8.9e-34 146.7 97 76.3
Solyc08g082160.3 Solanum lycopersicum HOM05D007275 ORTHO05D009279 1.2e-33 146.4 96 75.0
Sopen08g030440 Solanum pennellii HOM05D007275 ORTHO05D009279 1.2e-33 146.4 96 75.0
Ciclev10024283m.g Citrus clementina HOM05D007275 ORTHO05D009279 2.0e-33 145.6 94 74.5
Gohir.D11G024100 Gossypium hirsutum HOM05D007275 ORTHO05D009279 2.0e-33 145.6 94 75.5
Gorai.007G025800 Gossypium raimondii HOM05D007275 ORTHO05D009279 2.0e-33 145.6 94 75.5
MD06G1104700 Malus domestica HOM05D007275 ORTHO05D009279 2.0e-33 145.6 96 72.9
Sabra01G0069000 Salix brachista HOM05D007275 ORTHO05D009279 2.0e-33 145.6 94 76.6
SalBow1G5261 Salvia bowleyana HOM05D007275 ORTHO05D009279 2.6e-33 145.2 96 74.0
Gohir.A11G024400 Gossypium hirsutum HOM05D007275 ORTHO05D009279 3.4e-33 144.8 94 75.5
Haze_08628 Corylus avellana HOM05D007275 ORTHO05D009279 4.4e-33 144.4 90 77.8
Potri.003G138800 Populus trichocarpa HOM05D007275 ORTHO05D009279 4.4e-33 144.4 93 74.2
SalBow1G0766 Salvia bowleyana HOM05D007275 ORTHO05D009279 7.5e-33 143.7 96 72.9
MBI06_g46619_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D009279 9.8e-33 143.3 94 75.5
MBI06_g46730_MAGBIO Magnolia biondii HOM05D007275 ORTHO05D000022 9.8e-33 143.3 94 75.5
Nitab4.5_0000726g0090 Nicotiana tabacum HOM05D007275 ORTHO05D009279 1.3e-32 142.9 92 72.8
Sabra03G0100000 Salix brachista HOM05D007275 ORTHO05D009279 1.3e-32 142.9 93 73.1
Oeu038573.1 Olea europaea HOM05D007275 ORTHO05D009279 1.7e-32 142.5 96 70.8
arahy.Tifrunner.gnm1.ann1.IALD8X Arachis hypogaea HOM05D007275 ORTHO05D009279 3.7e-32 141.4 94 70.2
CSS0010422 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 3.7e-32 141.4 94 72.3
AUR62019826 Chenopodium quinoa HOM05D007275 ORTHO05D009279 3.7e-32 141.4 75 90.7
Phvul.002G297500 Phaseolus vulgaris HOM05D007275 ORTHO05D009279 4.9e-32 141.0 96 72.9
DCAR_005035 Daucus carota HOM05D007275 ORTHO05D009279 1.1e-31 139.8 95 71.6
COL.COLO4_10681 Corchorus olitorius HOM05D007275 ORTHO05D009279 1.4e-31 139.4 96 70.8
arahy.Tifrunner.gnm1.ann1.GQP3LI Arachis hypogaea HOM05D007275 ORTHO05D009279 1.9e-31 139.0 94 69.1
Lsat_1_v5_gn_3_10301 Lactuca sativa HOM05D007275 ORTHO05D009279 1.9e-31 139.0 94 72.3
ECA246G4125 Erigeron canadensis HOM05D007275 ORTHO05D009279 2.4e-31 138.7 91 73.6
HanXRQChr06g0166541 Helianthus annuus HOM05D007275 ORTHO05D009279 2.4e-31 138.7 92 71.7
Hma1.2p1_0229F.1_g097175 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.4e-31 138.7 93 72.0
Hma1.2p1_0229F.1_g097200 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 2.4e-31 138.7 93 72.0
RcHm_v2.0_Chr7g0195121 Rosa chinensis HOM05D007275 ORTHO05D009279 2.4e-31 138.7 96 71.9
Ah.12g052450 Amaranthus hybridus HOM05D006525 ORTHO05D007845 3.2e-31 138.3 75 88.0
CiPaw.12G084200 Carya illinoinensis HOM05D007275 ORTHO05D009279 3.2e-31 138.3 96 71.9
PGR031G2423 Punica granatum HOM05D007275 ORTHO05D009279 3.2e-31 138.3 96 69.8
Migut.A00668 Erythranthe guttata HOM05D007275 ORTHO05D009279 5.4e-31 137.5 93 72.0
Atru.chr9.2015 Acer truncatum HOM05D007275 ORTHO05D009279 9.2e-31 136.7 95 70.5
CSS0024458 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 1.2e-30 136.3 96 70.8
Dinv37542 Davidia involucrata HOM05D007275 ORTHO05D009279 2.7e-30 135.2 84 81.0
HanXRQChr17g0535191 Helianthus annuus HOM05D007275 ORTHO05D009279 3.5e-30 134.8 96 66.7
Glyma.08G022200 Glycine max HOM05D007275 ORTHO05D009279 1.3e-29 132.9 92 69.6
Lalb_Chr16g0390621 Lupinus albus HOM05D007275 ORTHO05D009279 1.7e-29 132.5 93 65.6
Aqoxy7G00131 Aquilegia oxysepala HOM05D007275 ORTHO05D009279 3.0e-29 131.7 96 66.7
Zm00001eb338790 Zea mays HOM05D007275 ORTHO05D009279 3.0e-29 131.7 97 70.1
Glyma.05G216300 Glycine max HOM05D007275 ORTHO05D009279 5.0e-29 131.0 92 68.5
Lj4g0015273 Lotus japonicus HOM05D007275 ORTHO05D009279 8.6e-29 130.2 92 68.5
TPR.G3422 Trifolium pratense HOM05D007275 ORTHO05D009279 8.6e-29 130.2 96 64.6
TWI60G1254 Tripterygium wilfordii HOM05D007275 ORTHO05D009279 1.1e-28 129.8 92 69.6
CANSAT21G2355 Cannabis sativa HOM05D007275 ORTHO05D009279 4.3e-28 127.9 94 66.0
FvH4_5g04420 Fragaria vesca HOM05D007275 ORTHO05D009279 5.6e-28 127.5 97 67.0
FAN08G0060 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.6e-28 127.5 96 66.7
FAN18G1142 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.6e-28 127.5 97 67.0
FAN18G2266 Fragaria x ananassa HOM05D007275 ORTHO05D009279 5.6e-28 127.5 97 67.0
ClCG07G014960 Citrullus lanatus HOM05D007275 ORTHO05D009279 1.1e-26 123.2 87 66.7
FvH4_3g01740 Fragaria vesca HOM05D007275 ORTHO05D009279 2.3e-26 122.1 97 64.9
Medtr8g099385 Medicago truncatula HOM05D007275 ORTHO05D009279 6.8e-26 120.6 93 61.3
unitig_748.g8124 Utricularia gibba HOM05D007275 ORTHO05D009279 2.6e-25 118.6 90 67.8
CDE10G0124 Ceratophyllum demersum HOM05D007275 ORTHO05D009279 9.8e-25 116.7 82 65.9
CsaV3_4G006490 Cucumis sativus L. HOM05D007275 ORTHO05D009279 3.7e-24 114.8 93 60.2
FAN13G1788 Fragaria x ananassa HOM05D007275 ORTHO05D009279 4.9e-24 114.4 125 52.8
MELO3C032816.2 Cucumis melo HOM05D007275 ORTHO05D009279 6.4e-24 114.0 87 64.4
Nitab4.5_0007661g0010 Nicotiana tabacum HOM05D007275 ORTHO05D009279 6.4e-24 114.0 85 64.7
ATR0320G041 Amborella trichopoda HOM05D007275 ORTHO05D009279 1.9e-23 112.5 90 63.3
Oeu063532.1 Olea europaea HOM05D007275 ORTHO05D009279 2.4e-23 112.1 84 65.5
Hma1.2p1_2596F.1_g325120 Hydrangea macrophylla HOM05D007275 ORTHO05D009279 4.1e-23 111.3 69 78.3
CDE10G0242 Ceratophyllum demersum HOM05D000974 ORTHO05D002201 5.4e-23 110.9 84 63.1
BcaNung01088 Brassica carinata HOM05D007275 ORTHO05D009279 9.2e-23 110.2 94 55.3
BcaNung01089 Brassica carinata HOM05D007275 ORTHO05D009279 2.1e-22 109.0 94 54.3
Sed0004885 Sechium edule HOM05D007275 ORTHO05D009279 2.7e-22 108.6 88 62.5
BcaC09g50944 Brassica carinata HOM05D007275 ORTHO05D009279 1.0e-21 106.7 94 53.2
A01p15130 Brassica napus HOM05D007275 ORTHO05D009279 1.0e-21 106.7 94 53.2
C01p19030 Brassica napus HOM05D007275 ORTHO05D009279 1.0e-21 106.7 94 53.2
BolC1t01829H Brassica oleracea HOM05D007275 ORTHO05D009279 1.0e-21 106.7 94 53.2
Duzib068G1121 Durio zibethinus HOM05D007275 ORTHO05D009279 2.3e-21 105.5 71 77.5
CSS0026606 Camellia sinensis var. sinensis HOM05D007275 ORTHO05D009279 6.6e-21 104.0 68 69.1
Psat7g026480 Pisum sativum HOM05D007275 ORTHO05D009279 3.3e-20 101.7 92 56.5
Rhsim02G0242000 Rhododendron simsii HOM05D007275 ORTHO05D009279 1.2e-19 99.8 67 76.1
SEGI_25349 Sequoiadendron giganteum HOM05D007275 ORTHO05D009279 2.6e-17 92.0 94 45.7
FAN04G0348 Fragaria x ananassa HOM05D007275 ORTHO05D009279 1.2e-14 83.2 97 50.5
Thhalv10027148m.g Eutrema salsugineum HOM05D007275 ORTHO05D009279 2.5e-12 75.5 67 53.7
Lalb_Chr16g0390631 Lupinus albus HOM05D007275 ORTHO05D009279 9.6e-12 73.6 50 64.0
Aqoxy2G01184 Aquilegia oxysepala HOM05D000015 ORTHO05D009146 3.5e-06 55.1 103 38.8


User provided reference genes

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