Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12901 Beta vulgaris HOM05D004067 ORTHO05D004827 3.1e-44 181.4 92 100.0
AUR62010823 Chenopodium quinoa HOM05D004067 ORTHO05D004827 6.3e-29 130.6 81 77.8
MD16G1028500 Malus domestica HOM05D004067 ORTHO05D004827 3.0e-23 111.7 79 63.3
Duzib251G0172 Durio zibethinus HOM05D004067 ORTHO05D004827 2.6e-22 108.6 79 64.6
Haze_11008 Corylus avellana HOM05D004067 ORTHO05D004827 9.8e-22 106.7 79 63.3
Prupe.1G324200 Prunus persica HOM05D004067 ORTHO05D004827 9.8e-22 106.7 78 62.8
GSVIVG01011761001 Vitis vinifera HOM05D004067 ORTHO05D004827 1.3e-21 106.3 93 57.0
Ah.07g197270 Amaranthus hybridus HOM05D004067 ORTHO05D004827 2.8e-21 105.1 78 65.4
Cfa008606 Carpinus fangiana HOM05D004067 ORTHO05D004827 4.8e-21 104.4 79 62.0
TWI81G0187 Tripterygium wilfordii HOM05D004067 ORTHO05D004827 1.1e-20 103.2 87 60.9
Glyma.09G118400 Glycine max HOM05D004067 ORTHO05D004827 2.4e-20 102.1 78 61.5
Sabra06G0086800 Salix brachista HOM05D004067 ORTHO05D004827 2.4e-20 102.1 78 62.8
Nn2g15268 Nelumbo nucifera HOM05D004067 ORTHO05D004827 5.4e-20 100.9 88 58.0
Potri.006G111600 Populus trichocarpa HOM05D004067 ORTHO05D004827 5.4e-20 100.9 78 62.8
Sc04g0005490 Simmondsia chinensis HOM05D004067 ORTHO05D004827 7.0e-20 100.5 82 59.8
Duzib248G1046 Durio zibethinus HOM05D004067 ORTHO05D004827 1.2e-19 99.8 79 58.2
Phvul.009G073100 Phaseolus vulgaris HOM05D004067 ORTHO05D004827 1.2e-19 99.8 78 57.7
QL01p001776 Quercus lobata HOM05D004067 ORTHO05D004827 1.2e-19 99.8 78 60.3
VMungo1309G2882 Vigna mungo HOM05D004067 ORTHO05D004827 1.2e-19 99.8 78 57.7
MELO3C018333.2 Cucumis melo HOM05D004067 ORTHO05D004827 1.6e-19 99.4 79 59.5
TAR627G0408 Trochodendron aralioides HOM05D004067 ORTHO05D004827 2.0e-19 99.0 87 58.6
CsaV3_5G013550 Cucumis sativus L. HOM05D004067 ORTHO05D004827 2.7e-19 98.6 79 59.5
CsaV3_UNG236440 Cucumis sativus L. HOM05D004067 ORTHO05D004827 2.7e-19 98.6 79 59.5
Thecc.02G281200 Theobroma cacao HOM05D004067 ORTHO05D004827 2.7e-19 98.6 79 60.8
Actinidia36670 Actinidia chinensis HOM05D004067 ORTHO05D004827 3.5e-19 98.2 87 58.6
Gohir.A01G152600 Gossypium hirsutum HOM05D004067 ORTHO05D004827 3.5e-19 98.2 78 57.7
Gohir.D01G145500 Gossypium hirsutum HOM05D004067 ORTHO05D004827 3.5e-19 98.2 78 57.7
Gorai.002G179700 Gossypium raimondii HOM05D004067 ORTHO05D004827 3.5e-19 98.2 78 57.7
Actinidia14967 Actinidia chinensis HOM05D004067 ORTHO05D004827 5.9e-19 97.4 87 56.3
Manes.12G111500 Manihot esculenta HOM05D004067 ORTHO05D004827 5.9e-19 97.4 80 61.2
COL.COLO4_20478 Corchorus olitorius HOM05D004067 ORTHO05D004827 7.7e-19 97.1 78 59.0
Manes.12G111400 Manihot esculenta HOM05D004067 ORTHO05D004827 7.7e-19 97.1 80 60.0
Nn3g18214 Nelumbo nucifera HOM05D004067 ORTHO05D004827 7.7e-19 97.1 88 56.8
ClCG07G006240 Citrullus lanatus HOM05D004067 ORTHO05D004827 1.0e-18 96.7 79 59.5
Potri.001G156300 Populus trichocarpa HOM05D004067 ORTHO05D004827 1.0e-18 96.7 78 60.3
Rhsim09G0097800 Rhododendron simsii HOM05D004067 ORTHO05D004827 1.7e-18 95.9 87 56.3
Dinv07642 Davidia involucrata HOM05D004067 ORTHO05D004827 2.2e-18 95.5 79 58.2
Dinv12988 Davidia involucrata HOM05D004067 ORTHO05D004827 2.2e-18 95.5 79 58.2
Sed0006623 Sechium edule HOM05D004067 ORTHO05D004827 2.9e-18 95.1 87 55.2
CSS0041256 Camellia sinensis var. sinensis HOM05D004067 ORTHO05D004827 3.8e-18 94.7 87 55.2
Dinv12989 Davidia involucrata HOM05D004067 ORTHO05D004827 3.8e-18 94.7 79 58.2
Eucgr.H00672 Eucalyptus grandis HOM05D004067 ORTHO05D004827 3.8e-18 94.7 78 57.7
Cpa.g.sc65.131 Carica papaya HOM05D004067 ORTHO05D004827 6.5e-18 94.0 79 58.2
CiPaw.05G249400 Carya illinoinensis HOM05D004067 ORTHO05D004827 6.5e-18 94.0 79 57.0
arahy.Tifrunner.gnm1.ann1.KUY2JB Arachis hypogaea HOM05D004067 ORTHO05D004827 8.5e-18 93.6 92 53.3
arahy.Tifrunner.gnm1.ann1.Z6YRHE Arachis hypogaea HOM05D004067 ORTHO05D004827 8.5e-18 93.6 92 53.3
Ciclev10015653m.g Citrus clementina HOM05D004067 ORTHO05D004827 1.1e-17 93.2 78 59.0
Nitab4.5_0007576g0010 Nicotiana tabacum HOM05D004067 ORTHO05D004827 1.5e-17 92.8 79 57.0
CSS0042578 Camellia sinensis var. sinensis HOM05D004067 ORTHO05D004827 1.9e-17 92.4 87 54.0
CANSAT35G0597 Cannabis sativa HOM05D004067 ORTHO05D004827 3.2e-17 91.7 79 54.4
Lj3P873T10 Lonicera japonica HOM05D004067 ORTHO05D004827 3.2e-17 91.7 79 57.0
Nitab4.5_0001832g0050 Nicotiana tabacum HOM05D004067 ORTHO05D004827 3.2e-17 91.7 79 55.7
PGR119G1546 Punica granatum HOM05D004067 ORTHO05D004827 4.2e-17 91.3 74 58.1
SHI04655 Sapria himalayana HOM05D004067 ORTHO05D004827 4.2e-17 91.3 86 53.5
CANSAT11G0808 Cannabis sativa HOM05D004067 ORTHO05D004827 5.5e-17 90.9 79 53.2
Lj1g0003353 Lotus japonicus HOM05D004067 ORTHO05D004827 5.5e-17 90.9 80 57.5
ECA234G3105 Erigeron canadensis HOM05D004067 ORTHO05D004827 7.2e-17 90.5 78 52.6
Hma1.2p1_0346F.1_g131330 Hydrangea macrophylla HOM05D004067 ORTHO05D004827 7.2e-17 90.5 87 50.6
Hma1.2p1_0346F.1_g131336 Hydrangea macrophylla HOM05D004067 ORTHO05D004827 7.2e-17 90.5 87 50.6
Psat3g190280 Pisum sativum HOM05D004067 ORTHO05D004827 7.2e-17 90.5 80 52.5
SalBow1G2245 Salvia bowleyana HOM05D004067 ORTHO05D004827 7.2e-17 90.5 87 52.9
Lalb_Chr10g0096231 Lupinus albus HOM05D004067 ORTHO05D004827 9.5e-17 90.1 80 56.2
Ca_07073_v3 Cicer arietinum L. HOM05D004067 ORTHO05D004827 1.2e-16 89.7 80 55.0
Nitab4.5_0000742g0040 Nicotiana tabacum HOM05D004067 ORTHO05D004827 1.2e-16 89.7 79 54.4
Ca_12604_v3 Cicer arietinum L. HOM05D004067 ORTHO05D004827 2.1e-16 89.0 80 55.0
Ca_25714_v3 Cicer arietinum L. HOM05D004067 ORTHO05D004827 2.1e-16 89.0 80 55.0
THA.LOC104824143 Tarenaya hassleriana HOM05D004067 ORTHO05D004827 2.1e-16 89.0 80 57.5
Lalb_Chr25g0280641 Lupinus albus HOM05D004067 ORTHO05D004827 2.8e-16 88.6 80 56.2
FvH4_4g32390 Fragaria vesca HOM05D004067 ORTHO05D004827 3.6e-16 88.2 79 54.4
FAN12G3660 Fragaria x ananassa HOM05D004067 ORTHO05D004827 3.6e-16 88.2 79 54.4
FAN17G2802 Fragaria x ananassa HOM05D004067 ORTHO05D004827 4.7e-16 87.8 79 53.2
FAN22G1587 Fragaria x ananassa HOM05D004067 ORTHO05D004827 4.7e-16 87.8 79 53.2
Oeu059504.1 Olea europaea HOM05D004067 ORTHO05D004827 6.1e-16 87.4 87 50.6
FAN07G2052 Fragaria x ananassa HOM05D004067 ORTHO05D004827 8.0e-16 87.0 79 53.2
Lj2g0007524 Lotus japonicus HOM05D004067 ORTHO05D004827 1.0e-15 86.7 80 56.2
CDE11G1068 Ceratophyllum demersum HOM05D006533 ORTHO05D004827 1.4e-15 86.3 73 50.7
Phvul.008G019900 Phaseolus vulgaris HOM05D004067 ORTHO05D004827 1.4e-15 86.3 91 50.5
Aqoxy5G03134 Aquilegia oxysepala HOM05D004067 ORTHO05D004827 1.8e-15 85.9 84 54.8
BcaB07g30747 Brassica carinata HOM05D004067 ORTHO05D004827 1.8e-15 85.9 80 50.0
Carub.0005s0037 Capsella rubella HOM05D004067 ORTHO05D004827 1.8e-15 85.9 80 53.8
PGSC0003DMG400030500 Solanum tuberosum HOM05D004067 ORTHO05D004827 1.8e-15 85.9 91 45.1
BcaC06g31313 Brassica carinata HOM05D004067 ORTHO05D004827 2.3e-15 85.5 80 52.5
CARHR143920 Cardamine hirsuta HOM05D004067 ORTHO05D004827 2.3e-15 85.5 80 51.2
DCAR_007292 Daucus carota HOM05D004067 ORTHO05D004827 2.3e-15 85.5 74 55.4
HanXRQChr12g0377591 Helianthus annuus HOM05D004067 ORTHO05D004827 3.0e-15 85.1 79 50.6
Lsat_1_v5_gn_4_14640 Lactuca sativa HOM05D004067 ORTHO05D004827 3.0e-15 85.1 87 48.3
Medtr7g020840 Medicago truncatula HOM05D004067 ORTHO05D004827 3.0e-15 85.1 80 52.5
CAN.G849.4 Capsicum annuum HOM05D004067 ORTHO05D004827 4.0e-15 84.7 79 51.9
PGSC0003DMG400005957 Solanum tuberosum HOM05D004067 ORTHO05D004827 4.0e-15 84.7 79 49.4
BolC9t55873H Brassica oleracea HOM05D004067 ORTHO05D004827 5.2e-15 84.3 80 48.8
Migut.E00421 Erythranthe guttata HOM05D004067 ORTHO05D004827 5.2e-15 84.3 79 51.9
Psat0s1827g0080 Pisum sativum HOM05D004067 ORTHO05D004827 5.2e-15 84.3 81 50.6
Solyc04g007660.1 Solanum lycopersicum HOM05D004067 ORTHO05D004827 5.2e-15 84.3 90 45.6
SGA_v2.0_scaffold257G45678 Striga asiatica HOM05D004067 ORTHO05D004827 5.2e-15 84.3 79 53.2
Atru.chr11.1192 Acer truncatum HOM05D004067 ORTHO05D004827 6.8e-15 84.0 78 52.6
Atru.chr11.1199 Acer truncatum HOM05D004067 ORTHO05D004827 6.8e-15 84.0 78 52.6
Atru.chr11.1779 Acer truncatum HOM05D004067 ORTHO05D004827 6.8e-15 84.0 78 53.8
A09p23340 Brassica napus HOM05D004067 ORTHO05D004827 6.8e-15 84.0 93 43.0
BraA09t37935Z Brassica rapa HOM05D004067 ORTHO05D004827 6.8e-15 84.0 93 43.0
Glyma.08G257000 Glycine max HOM05D004067 ORTHO05D004827 6.8e-15 84.0 91 47.3
MSTRG.2173 Avicennia marina HOM05D004067 ORTHO05D004827 8.8e-15 83.6 87 47.1
BcaC06g34181 Brassica carinata HOM05D004067 ORTHO05D004827 8.8e-15 83.6 80 52.5
BcaC06g34189 Brassica carinata HOM05D004067 ORTHO05D004827 8.8e-15 83.6 80 52.5
C09p30090 Brassica napus HOM05D004067 ORTHO05D004827 8.8e-15 83.6 80 48.8
Medtr6g021910 Medicago truncatula HOM05D004067 ORTHO05D004827 8.8e-15 83.6 76 53.9
PSO478G1363 Papaver somniferum HOM05D004067 ORTHO05D004827 8.8e-15 83.6 73 56.2
BcaC04g21591 Brassica carinata HOM05D004067 ORTHO05D004827 1.2e-14 83.2 80 47.5
Psat0s2696g0040 Pisum sativum HOM05D004067 ORTHO05D004827 1.2e-14 83.2 81 51.9
Psat0s2696g0240 Pisum sativum HOM05D004067 ORTHO05D004827 1.2e-14 83.2 81 51.9
Psat0s4857g0040 Pisum sativum HOM05D004067 ORTHO05D004827 1.2e-14 83.2 81 51.9
Psat0s6339g0160 Pisum sativum HOM05D004067 ORTHO05D004827 1.2e-14 83.2 81 51.9
Psat0s8196g0040 Pisum sativum HOM05D004067 ORTHO05D004827 1.2e-14 83.2 81 51.9
AT2G01410 Arabidopsis thaliana HOM05D004067 ORTHO05D004827 1.5e-14 82.8 80 52.5
Sopen04g002750 Solanum pennellii HOM05D004067 ORTHO05D004827 1.5e-14 82.8 78 50.0
VMungo1383G0958 Vigna mungo HOM05D004067 ORTHO05D004827 2.0e-14 82.4 88 48.9
AL5G10370 Arabidopsis lyrata HOM05D004067 ORTHO05D004827 4.4e-14 81.3 80 50.0
Thhalv10001208m.g Eutrema salsugineum HOM05D004067 ORTHO05D004827 4.4e-14 81.3 80 51.2
Medtr3g070770 Medicago truncatula HOM05D004067 ORTHO05D004827 4.4e-14 81.3 80 50.0
Sp2g12840 Schrenkiella parvula HOM05D004067 ORTHO05D004827 5.7e-14 80.9 80 50.0
Sopen05g003980 Solanum pennellii HOM05D004067 ORTHO05D004827 5.7e-14 80.9 79 48.1
PSO017G4920 Papaver somniferum HOM05D004067 ORTHO05D004827 7.5e-14 80.5 73 52.1
Medtr1g030760 Medicago truncatula HOM05D004067 ORTHO05D004827 1.3e-13 79.7 83 50.6
Oeu045868.1 Olea europaea HOM05D004067 ORTHO05D004827 1.7e-13 79.3 79 46.8
Lj6A746T53 Lonicera japonica HOM05D004067 ORTHO05D004827 3.7e-13 78.2 79 46.8
TPR.G39266 Trifolium pratense HOM05D004067 ORTHO05D004827 3.7e-13 78.2 81 48.1
Eucgr.L01715 Eucalyptus grandis HOM05D004067 ORTHO05D004827 8.3e-13 77.0 64 57.8
MSTRG.13583 Avicennia marina HOM05D004067 ORTHO05D004827 1.1e-12 76.6 78 50.0
Psat0s2696g0160 Pisum sativum HOM05D004067 ORTHO05D004827 1.8e-12 75.9 81 48.1
TPR.G36928 Trifolium pratense HOM05D004067 ORTHO05D004827 1.8e-12 75.9 82 48.8
Aa31LG2G8540 Aethionema arabicum HOM05D004067 ORTHO05D004827 9.2e-12 73.6 80 45.0
CAN.G1298.2 Capsicum annuum HOM05D004067 ORTHO05D004827 9.2e-12 73.6 67 53.7
THA.LOC104805062 Tarenaya hassleriana HOM05D004067 ORTHO05D004827 1.2e-11 73.2 80 45.0
TAR627G0040 Trochodendron aralioides HOM05D004067 ORTHO05D004827 1.2e-11 73.2 64 54.7
Cc02_g26910 Coffea canephora HOM05D004067 ORTHO05D004827 4.5e-11 71.2 79 43.0
Ah.12g052420 Amaranthus hybridus HOM05D004067 ORTHO05D004827 8.6e-10 67.0 42 71.4
TAR629G0314 Trochodendron aralioides HOM05D004067 ORTHO05D004827 8.6e-10 67.0 50 66.0
SEGI_06567 Sequoiadendron giganteum HOM05D004067 ORTHO05D004827 1.9e-09 65.9 73 39.7
Peaxi162Scf00253g01313 Petunia axillaris HOM05D004067 ORTHO05D004827 1.8e-07 59.3 76 40.8
AagrBONN_evm.TU.Sc2ySwM_344.2330 Anthoceros agrestis HOM05D004067 ORTHO05D004827 1.5e-06 56.2 80 41.2
Psat0s4857g0120 Pisum sativum HOM05D004067 ORTHO05D004827 1.5e-06 56.2 53 50.9
Mapoly0139s0024 Marchantia polymorpha HOM05D004067 ORTHO05D004827 3.4e-06 55.1 75 36.0
ATR0053G001 Amborella trichopoda HOM05D004067 ORTHO05D004827 7.5e-06 53.9 89 34.8
MD13G1025700 Malus domestica HOM05D004067 ORTHO05D004827 7.5e-06 53.9 47 57.4


User provided reference genes

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