Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12820 Beta vulgaris HOM05D007942 ORTHO05D010045 1.6e-74 282.7 145 100.0
AUR62010730 Chenopodium quinoa HOM05D007942 ORTHO05D010045 1.5e-29 133.3 89 73.0
Ah.07g196590 Amaranthus hybridus HOM05D007942 ORTHO05D010045 6.4e-28 127.9 102 64.7
Hund11441 Selenicereus undatus HOM05D007942 ORTHO05D010045 2.7e-26 122.5 96 67.7
Prupe.5G105000 Prunus persica HOM05D007942 ORTHO05D010045 3.4e-13 79.0 92 48.9
Manes.02G018400 Manihot esculenta HOM05D007942 ORTHO05D010045 1.3e-12 77.0 92 47.8
vmacro13966 Vaccinium macrocarpon HOM05D007942 ORTHO05D010045 3.8e-12 75.5 102 43.1
SalBow8G0610 Salvia bowleyana HOM05D007942 ORTHO05D010045 1.4e-11 73.6 88 48.9
CAN.G532.20 Capsicum annuum HOM05D007942 ORTHO05D010045 1.9e-11 73.2 66 54.5
GSVIVG01019402001 Vitis vinifera HOM05D007942 ORTHO05D010045 1.9e-11 73.2 92 48.9
THA.LOC104814669 Tarenaya hassleriana HOM05D007942 ORTHO05D010045 2.5e-11 72.8 79 48.1
Ciclev10023096m.g Citrus clementina HOM05D007942 ORTHO05D010045 5.5e-11 71.6 92 47.8
Gorai.004G139100 Gossypium raimondii HOM05D007942 ORTHO05D010045 9.4e-11 70.9 96 49.0
ClCG01G002420 Citrullus lanatus HOM05D007942 ORTHO05D010045 1.2e-10 70.5 92 41.3
Gohir.A08G115301 Gossypium hirsutum HOM05D007942 ORTHO05D010045 1.2e-10 70.5 96 49.0
MD06G1089100 Malus domestica HOM05D007942 ORTHO05D010045 1.2e-10 70.5 92 47.8
Nitab4.5_0000769g0190 Nicotiana tabacum HOM05D007942 ORTHO05D010045 1.6e-10 70.1 69 49.3
Atru.chr9.2136 Acer truncatum HOM05D007942 ORTHO05D010045 2.7e-10 69.3 77 48.1
QL12p032065 Quercus lobata HOM05D007942 ORTHO05D010045 3.6e-10 68.9 77 57.1
MELO3C005703.2 Cucumis melo HOM05D007942 ORTHO05D010045 4.6e-10 68.6 92 41.3
Nitab4.5_0002282g0090 Nicotiana tabacum HOM05D007942 ORTHO05D010045 7.9e-10 67.8 69 47.8
PGSC0003DMG400012189 Solanum tuberosum HOM05D007942 ORTHO05D010045 7.9e-10 67.8 65 50.8
Sopen08g029790 Solanum pennellii HOM05D007942 ORTHO05D010045 1.0e-09 67.4 65 53.8
SGA_v2.0_scaffold111G31481 Striga asiatica HOM05D007942 ORTHO05D010045 1.0e-09 67.4 82 46.3
Peaxi162Scf00074g01832 Petunia axillaris HOM05D007942 ORTHO05D010045 1.8e-09 66.6 62 51.6
Haze_08827 Corylus avellana HOM05D007942 ORTHO05D010045 2.3e-09 66.2 92 46.7
Glyma.01G221800 Glycine max HOM05D007942 ORTHO05D010045 2.3e-09 66.2 94 44.7
Solyc08g081455.1 Solanum lycopersicum HOM05D007942 ORTHO05D010045 2.3e-09 66.2 65 52.3
Eucgr.E00650 Eucalyptus grandis HOM05D007942 ORTHO05D010045 3.0e-09 65.9 84 45.2
Potri.003G131550 Populus trichocarpa HOM05D007942 ORTHO05D010045 3.9e-09 65.5 77 40.3
Dinv37608 Davidia involucrata HOM05D007942 ORTHO05D010045 6.7e-09 64.7 82 43.9
RcHm_v2.0_Chr7g0196851 Rosa chinensis HOM05D007942 ORTHO05D010045 1.5e-08 63.5 92 44.6
Aa31LG6G6680 Aethionema arabicum HOM05D007942 ORTHO05D010045 2.5e-08 62.8 75 40.0
Migut.E01201 Erythranthe guttata HOM05D007942 ORTHO05D010045 2.5e-08 62.8 89 42.7
Cc03_g15820 Coffea canephora HOM05D007942 ORTHO05D010045 3.3e-08 62.4 81 40.7
Cc08_g15120 Coffea canephora HOM05D007942 ORTHO05D010045 3.3e-08 62.4 81 40.7
Psat2g183000 Pisum sativum HOM05D007942 ORTHO05D010045 3.3e-08 62.4 65 50.8
TPR.G6630 Trifolium pratense HOM05D007942 ORTHO05D010045 3.3e-08 62.4 91 44.0
ECA240G3258 Erigeron canadensis HOM05D007942 ORTHO05D010045 4.3e-08 62.0 89 42.7
Thecc.03G284800 Theobroma cacao HOM05D007942 ORTHO05D010045 4.3e-08 62.0 66 48.5
A01p14720 Brassica napus HOM05D007942 ORTHO05D010045 5.7e-08 61.6 64 43.8
BraA01t01411Z Brassica rapa HOM05D007942 ORTHO05D010045 5.7e-08 61.6 64 43.8
DCAR_004614 Daucus carota HOM05D007942 ORTHO05D010045 7.4e-08 61.2 90 42.2
HanXRQChr13g0415991 Helianthus annuus HOM05D007942 ORTHO05D010045 7.4e-08 61.2 90 41.1
CsaV3_5G002530 Cucumis sativus L. HOM05D007942 ORTHO05D010045 1.3e-07 60.5 58 51.7
Lalb_Chr05g0211711 Lupinus albus HOM05D007942 ORTHO05D010045 1.3e-07 60.5 65 49.2
TWI81G0525 Tripterygium wilfordii HOM05D007942 ORTHO05D010045 1.7e-07 60.1 82 39.0
Aqoxy7G00242 Aquilegia oxysepala HOM05D007942 ORTHO05D010045 2.8e-07 59.3 61 50.8
BcaC09g50992 Brassica carinata HOM05D007942 ORTHO05D010045 6.3e-07 58.2 64 42.2
C01p18220 Brassica napus HOM05D007942 ORTHO05D010045 6.3e-07 58.2 64 42.2
BolC1t01748H Brassica oleracea HOM05D007942 ORTHO05D010045 6.3e-07 58.2 64 42.2
FAN18G2800 Fragaria x ananassa HOM05D007942 ORTHO05D010045 6.3e-07 58.2 92 43.5
Cpa.g.sc180.26 Carica papaya HOM05D007942 ORTHO05D010045 1.1e-06 57.4 77 44.2
Medtr5g010040 Medicago truncatula HOM05D007942 ORTHO05D010045 1.1e-06 57.4 81 42.0
Ca_24542_v3 Cicer arietinum L. HOM05D007942 ORTHO05D010045 1.8e-06 56.6 65 49.2
FvH4_5g03010 Fragaria vesca HOM05D007942 ORTHO05D010045 1.8e-06 56.6 92 43.5
BcaNung01050 Brassica carinata HOM05D007942 ORTHO05D010045 3.1e-06 55.8 64 40.6
LjContig00312_ERROPOS870357g0005136 Lotus japonicus HOM05D007942 ORTHO05D010045 3.1e-06 55.8 65 44.6
Phvul.002G159300 Phaseolus vulgaris HOM05D007942 ORTHO05D010045 5.3e-06 55.1 56 48.2
Duzib205G1349 Durio zibethinus HOM05D007942 ORTHO05D010045 6.9e-06 54.7 76 42.1
Lsat_1_v5_gn_6_85240 Lactuca sativa HOM05D007942 ORTHO05D010045 9.1e-06 54.3 93 38.7


User provided reference genes

Program Settings