Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 0.0e+00 2808.9 1407 100.0
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 0.0e+00 1559.7 1408 61.7
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 0.0e+00 1456.8 1357 60.4
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 0.0e+00 1437.9 1359 58.7
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 0.0e+00 1421.8 1359 58.1
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 0.0e+00 1332.8 1358 55.5
Ah.07g196520 Amaranthus hybridus HOM05D006627 ORTHO05D007753 5.6e-286 988.4 1381 46.8
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 2.8e-261 906.4 1420 42.7
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 1.4e-188 664.8 1451 36.0
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 1.0e-109 402.9 1527 30.1
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 2.2e-109 401.7 1525 30.4
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 1.1e-108 399.4 1577 29.0
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 1.6e-107 395.6 1455 30.8
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 3.6e-107 394.4 1378 30.0
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 3.0e-106 391.3 1573 29.8
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 2.4e-103 381.7 1508 29.6
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 1.1e-100 372.9 1523 29.8
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 6.3e-96 357.1 1524 29.4
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 3.6e-91 341.3 1498 29.0
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 3.2e-79 301.6 1399 27.9
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 8.9e-66 256.9 1566 26.8
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 1.0e-61 243.4 1453 26.1
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 7.3e-60 237.3 1341 25.4
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 2.6e-57 228.8 1452 26.0
Dinv37613 Davidia involucrata HOM05D006627 ORTHO05D007753 1.1e-55 223.4 1478 24.6
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 6.2e-51 207.6 1415 25.1
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 8.4e-48 197.2 1414 25.0
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 7.1e-47 194.1 1470 25.6
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 2.4e-39 169.1 1462 26.1
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.1e-38 166.0 456 33.8
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 6.0e-38 164.5 1408 24.7
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 1.3e-37 163.3 1408 24.9
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.9e-37 161.8 1406 25.0
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.9e-36 159.5 1405 24.5
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 1.3e-35 156.8 1370 25.5
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 6.2e-35 154.5 1385 24.5
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.2e-35 154.1 1401 24.6
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 8.2e-35 154.1 1417 24.8
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 3.1e-34 152.1 1401 24.6
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.0e-33 149.4 1409 24.7
FAN01G2627 Fragaria x ananassa HOM05D006627 ORTHO05D007753 5.8e-33 147.9 1381 24.6
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 3.2e-31 142.1 1459 25.2
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 3.0e-29 135.6 1357 23.6
Atru.chr9.2147 Acer truncatum HOM05D006627 ORTHO05D007753 1.1e-28 133.7 1200 22.7
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 2.5e-28 132.5 1060 25.3
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 6.3e-27 127.9 1414 24.3
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 2.4e-26 125.9 1445 23.5
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 5.3e-26 124.8 1415 24.0
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 2.6e-25 122.5 1103 23.9
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 2.6e-25 122.5 1387 24.9
MD01G1207000 Malus domestica HOM05D006627 ORTHO05D007753 1.0e-24 120.6 1487 24.5
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 2.2e-24 119.4 190 43.7
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.2e-24 119.4 1448 23.3
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 5.0e-24 118.2 331 33.8
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 5.0e-24 118.2 331 33.8
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 5.0e-24 118.2 1364 24.1
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 5.0e-24 118.2 1410 23.6
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 1.4e-23 116.7 1406 23.4
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 2.7e-22 112.5 584 26.4
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 1.3e-21 110.2 355 31.8
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 2.3e-21 109.4 351 31.6
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 1.9e-20 106.3 751 24.6
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 1.9e-20 106.3 751 24.6
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 4.3e-20 105.1 530 27.9
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 5.7e-20 104.8 764 23.7
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 2.2e-19 102.8 738 24.3
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 3.7e-19 102.1 330 30.9
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 4.8e-19 101.7 578 26.6
Sabra04G0052500 Salix brachista HOM05D006627 ORTHO05D007753 6.3e-19 101.3 1437 23.8
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 5.3e-18 98.2 1325 23.5
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.5e-17 96.7 333 32.7
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 4.5e-17 95.1 342 29.8
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 4.5e-17 95.1 1366 23.7
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 4.5e-17 95.1 1426 23.6
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 1.3e-16 93.6 383 31.1
Lj1C1004T5 Lonicera japonica HOM05D006627 ORTHO05D007753 1.3e-16 93.6 210 36.7
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 1.7e-16 93.2 349 32.4
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 5.0e-16 91.7 345 29.6
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 6.5e-16 91.3 366 33.6
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 4.2e-15 88.6 1375 23.4
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 7.2e-15 87.8 318 29.9
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 7.2e-15 87.8 336 28.3
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 1.2e-14 87.0 1377 23.7
CARHR233080 Cardamine hirsuta HOM05D008661 ORTHO05D010872 1.6e-14 86.7 335 29.3
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 6.1e-14 84.7 1467 23.2
SalBow4G0794 Salvia bowleyana HOM05D006627 ORTHO05D007753 7.9e-14 84.3 1371 22.8
Carub.0238s0001 Capsella rubella HOM05D008661 ORTHO05D010872 1.0e-13 84.0 351 29.1
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 1.4e-13 83.6 349 30.4
Carub.0007s1533 Capsella rubella HOM05D008661 ORTHO05D010872 1.1e-12 80.5 342 27.2
ECA233G3260 Erigeron canadensis HOM05D001089 ORTHO05D000920 3.3e-12 79.0 407 28.0
Potri.004G079000 Populus trichocarpa HOM05D006627 ORTHO05D007753 7.4e-12 77.8 1437 23.5
PGSC0003DMG400010123 Solanum tuberosum HOM05D006627 ORTHO05D007753 9.7e-12 77.4 1298 22.3
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 1.3e-11 77.0 324 29.9
AL8G26990 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 2.8e-11 75.9 336 29.2
Dinv35244 Davidia involucrata HOM05D006627 ORTHO05D007753 3.7e-11 75.5 224 33.0
Potri.017G142600 Populus trichocarpa HOM05D006627 ORTHO05D007753 3.7e-11 75.5 1409 23.3
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 3.7e-11 75.5 341 28.2
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 1.4e-10 73.6 1425 23.9
CARHR233070 Cardamine hirsuta HOM05D008661 ORTHO05D010872 1.8e-10 73.2 334 30.2
Hma1.2p1_0327F.1_g126380 Hydrangea macrophylla HOM05D006627 ORTHO05D007753 2.4e-10 72.8 518 27.4
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 1.2e-09 70.5 308 29.9
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 1.2e-09 70.5 308 29.9
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.5e-09 70.1 194 35.1
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 2.0e-09 69.7 310 29.0
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 2.0e-09 69.7 310 29.0
CDE07G1237 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 2.0e-09 69.7 645 22.9
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 2.0e-09 69.7 1393 23.3
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 2.6e-09 69.3 1533 22.4
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 4.5e-09 68.6 305 27.9
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 7.7e-09 67.8 1499 22.3
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 1.7e-08 66.6 310 28.7
Lsat_1_v5_gn_3_6981 Lactuca sativa HOM05D006627 ORTHO05D007753 1.7e-08 66.6 126 36.5
AT5G52530 Arabidopsis thaliana HOM05D008661 ORTHO05D010872 2.2e-08 66.2 331 28.1
BcaB03g12481 Brassica carinata HOM05D008661 ORTHO05D010872 2.9e-08 65.9 526 24.5
BcaB03g12479 Brassica carinata HOM05D008661 ORTHO05D010872 5.0e-08 65.1 324 29.9
MSTRG.8718 Avicennia marina HOM05D006627 ORTHO05D007753 1.1e-07 63.9 1391 23.1
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 2.5e-07 62.8 1357 23.1
Carub.0008s1265 Capsella rubella HOM05D008661 ORTHO05D010872 3.2e-07 62.4 197 33.5
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 5.5e-07 61.6 782 22.0
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 1.6e-06 60.1 1305 22.1
HPP92_028524 Vanilla planifolia HOM05D061474 ORTHO05D007753 4.7e-06 58.5 236 30.5
HPP92_028535 Vanilla planifolia HOM05D061474 ORTHO05D007753 4.7e-06 58.5 236 30.5
HanXRQChr09g0252481 Helianthus annuus HOM05D029832 ORTHO05D007753 6.1e-06 58.2 262 29.8
Sp6g14700 Schrenkiella parvula HOM05D008661 ORTHO05D010872 8.0e-06 57.8 320 26.9


User provided reference genes

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