Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12669 Beta vulgaris HOM05D000670 ORTHO05D000529 8.1e-42 173.3 88 100.0
EL10Ac6g13290 Beta vulgaris HOM05D000670 ORTHO05D000529 3.7e-10 68.2 88 39.8
ClCG02G007480 Citrullus lanatus HOM05D000670 ORTHO05D000529 5.9e-08 60.8 72 43.1
Aa31LG6G14770 Aethionema arabicum HOM05D000670 ORTHO05D000529 2.2e-07 58.9 61 45.9
unitig_0.g487 Utricularia gibba HOM05D000670 ORTHO05D000529 2.2e-07 58.9 67 40.3
Ah.02g129260 Amaranthus hybridus HOM05D000670 ORTHO05D000529 2.9e-07 58.5 67 43.3
Cfa006808 Carpinus fangiana HOM05D000670 ORTHO05D000529 2.9e-07 58.5 82 40.2
Lj4A173G11 Lonicera japonica HOM05D000670 ORTHO05D000529 2.9e-07 58.5 82 42.7
TAR376G1164 Trochodendron aralioides HOM05D000670 ORTHO05D000529 2.9e-07 58.5 83 43.4
Duzib187G1614 Durio zibethinus HOM05D000670 ORTHO05D000529 3.8e-07 58.2 82 41.5
Gohir.A04G127906 Gossypium hirsutum HOM05D000670 ORTHO05D000529 3.8e-07 58.2 64 43.8
Hma1.2p1_0723F.1_g208820 Hydrangea macrophylla HOM05D000670 ORTHO05D000529 3.8e-07 58.2 80 41.2
Lj4A172T20 Lonicera japonica HOM05D000670 ORTHO05D000529 3.8e-07 58.2 82 42.7
Thecc.01G081400 Theobroma cacao HOM05D000670 ORTHO05D000529 3.8e-07 58.2 80 41.2
COL.COLO4_17839 Corchorus olitorius HOM05D000670 ORTHO05D000529 5.0e-07 57.8 77 41.6
MELO3C018555.2 Cucumis melo HOM05D000670 ORTHO05D000529 5.0e-07 57.8 70 41.4
CsaV3_7G007460 Cucumis sativus L. HOM05D000670 ORTHO05D000529 5.0e-07 57.8 70 42.9
Gohir.A02G147300 Gossypium hirsutum HOM05D000670 ORTHO05D000529 5.0e-07 57.8 80 40.0
Gorai.003G034700 Gossypium raimondii HOM05D000670 ORTHO05D000529 5.0e-07 57.8 80 40.0
Lalb_Chr04g0262261 Lupinus albus HOM05D000670 ORTHO05D000529 5.0e-07 57.8 84 35.7
Gohir.D03G033100 Gossypium hirsutum HOM05D000670 ORTHO05D000529 6.5e-07 57.4 80 40.0
Lj2P426T37 Lonicera japonica HOM05D000670 ORTHO05D000529 6.5e-07 57.4 69 39.1
Glyma.13G253500 Glycine max HOM05D000670 ORTHO05D000529 8.5e-07 57.0 81 37.0
Thecc.02G035300 Theobroma cacao HOM05D000670 ORTHO05D000529 8.5e-07 57.0 77 41.6
TAR376G0520 Trochodendron aralioides HOM05D000670 ORTHO05D000529 8.5e-07 57.0 83 39.8
Duzib187G1813 Durio zibethinus HOM05D000670 ORTHO05D000529 1.1e-06 56.6 80 40.0
CSS0043636 Camellia sinensis var. sinensis HOM05D000670 ORTHO05D000529 1.4e-06 56.2 84 40.5
Cpa.g.sc20.63 Carica papaya HOM05D000670 ORTHO05D000529 1.4e-06 56.2 84 38.1
COL.COLO4_11659 Corchorus olitorius HOM05D000670 ORTHO05D000529 1.4e-06 56.2 80 42.5
Sed0024556 Sechium edule HOM05D000670 ORTHO05D000529 1.4e-06 56.2 72 40.3
BcaNung00968 Brassica carinata HOM05D000670 ORTHO05D000529 1.9e-06 55.8 62 41.9
C01p01350 Brassica napus HOM05D000670 ORTHO05D000529 1.9e-06 55.8 62 41.9
BolC1t00131H Brassica oleracea HOM05D000670 ORTHO05D000529 1.9e-06 55.8 62 41.9
CSS0038366 Camellia sinensis var. sinensis HOM05D000670 ORTHO05D000529 1.9e-06 55.8 82 39.0
CARHR246240 Cardamine hirsuta HOM05D000670 ORTHO05D000529 1.9e-06 55.8 61 42.6
Haze_10360 Corylus avellana HOM05D000670 ORTHO05D000529 1.9e-06 55.8 88 38.6
FAN23G2459 Fragaria x ananassa HOM05D000670 ORTHO05D000529 1.9e-06 55.8 86 40.7
FAN28G0905 Fragaria x ananassa HOM05D000670 ORTHO05D000529 1.9e-06 55.8 87 40.2
Lalb_Chr09g0327051 Lupinus albus HOM05D000670 ORTHO05D000529 1.9e-06 55.8 76 36.8
Hund23204 Selenicereus undatus HOM05D000670 ORTHO05D000529 1.9e-06 55.8 83 38.6
MSTRG.23639 Avicennia marina HOM05D000670 ORTHO05D000529 2.5e-06 55.5 88 38.6
BraA01t00117Z Brassica rapa HOM05D000670 ORTHO05D000529 2.5e-06 55.5 62 41.9
COL.COLO4_17840 Corchorus olitorius HOM05D000670 ORTHO05D000529 2.5e-06 55.5 75 40.0
MELO3C007678.2 Cucumis melo HOM05D000670 ORTHO05D000529 2.5e-06 55.5 62 51.6
Manes.12G119700 Manihot esculenta HOM05D000670 ORTHO05D000529 2.5e-06 55.5 67 41.8
arahy.Tifrunner.gnm1.ann1.JFV18T Arachis hypogaea HOM05D000670 ORTHO05D000529 3.2e-06 55.1 64 42.2
MSTRG.3498 Avicennia marina HOM05D000670 ORTHO05D000529 3.2e-06 55.1 86 39.5
Duzib132G0333 Durio zibethinus HOM05D000670 ORTHO05D000529 3.2e-06 55.1 77 41.6
Hma1.2p1_0723F.1_g208810 Hydrangea macrophylla HOM05D000670 ORTHO05D000529 3.2e-06 55.1 83 39.8
Nitab4.5_0005609g0070 Nicotiana tabacum HOM05D000670 ORTHO05D000529 3.2e-06 55.1 80 37.5
Atru.chr6.1414 Acer truncatum HOM05D000670 ORTHO05D000529 4.2e-06 54.7 85 36.5
arahy.Tifrunner.gnm1.ann1.07ZIFT Arachis hypogaea HOM05D000670 ORTHO05D000529 4.2e-06 54.7 64 40.6
Ca_18423_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 4.2e-06 54.7 76 39.5
Ca_18438_v3 Cicer arietinum L. HOM05D000670 ORTHO05D000529 4.2e-06 54.7 76 39.5
FAN26G1869 Fragaria x ananassa HOM05D000670 ORTHO05D000529 4.2e-06 54.7 86 39.5
Gorai.012G161900 Gossypium raimondii HOM05D000670 ORTHO05D000529 4.2e-06 54.7 70 41.4
Lj8P617T7 Lonicera japonica HOM05D000670 ORTHO05D000529 4.2e-06 54.7 69 39.1
Oeu005737.2 Olea europaea HOM05D000670 ORTHO05D000529 4.2e-06 54.7 78 41.0
Aa31LG6G14760 Aethionema arabicum HOM05D000670 ORTHO05D000529 5.5e-06 54.3 66 40.9
MSTRG.3497 Avicennia marina HOM05D000670 ORTHO05D000529 5.5e-06 54.3 85 38.8
CsaV3_6G044560 Cucumis sativus L. HOM05D000670 ORTHO05D000529 5.5e-06 54.3 62 48.4
Medtr2g104650 Medicago truncatula HOM05D000670 ORTHO05D000529 5.5e-06 54.3 63 39.7
Oeu059809.2 Olea europaea HOM05D000670 ORTHO05D000529 5.5e-06 54.3 62 43.5
SGA_v2.0_scaffold149G36560 Striga asiatica HOM05D000670 ORTHO05D000529 5.5e-06 54.3 63 39.7
A01p01190 Brassica napus HOM05D000670 ORTHO05D000529 7.2e-06 53.9 62 40.3
CiPaw.05G025200 Carya illinoinensis HOM05D000670 ORTHO05D000529 7.2e-06 53.9 75 38.7
AUR62014013 Chenopodium quinoa HOM05D000670 ORTHO05D000529 7.2e-06 53.9 67 41.8
Cc06_g21690 Coffea canephora HOM05D000670 ORTHO05D000529 7.2e-06 53.9 71 38.0
Gohir.A11G049600 Gossypium hirsutum HOM05D000670 ORTHO05D000529 7.2e-06 53.9 84 35.7
SGA_v2.0_scaffold174G39230 Striga asiatica HOM05D000670 ORTHO05D000529 7.2e-06 53.9 72 38.9
TAR381G1681 Trochodendron aralioides HOM05D000670 ORTHO05D000529 7.2e-06 53.9 84 40.5
AT4G37850 Arabidopsis thaliana HOM05D000670 ORTHO05D000529 9.4e-06 53.5 86 39.5
EL10Ac8g19291 Beta vulgaris HOM05D000670 ORTHO05D000529 9.4e-06 53.5 67 35.8
BcaNung00970 Brassica carinata HOM05D000670 ORTHO05D000529 9.4e-06 53.5 61 39.3
CSS0049230 Camellia sinensis var. sinensis HOM05D000670 ORTHO05D000529 9.4e-06 53.5 80 37.5
AUR62005877 Chenopodium quinoa HOM05D000670 ORTHO05D000529 9.4e-06 53.5 88 39.8
Duzib264G0241 Durio zibethinus HOM05D000670 ORTHO05D000529 9.4e-06 53.5 81 37.0
Gohir.D01G169900 Gossypium hirsutum HOM05D000670 ORTHO05D000529 9.4e-06 53.5 64 39.1


User provided reference genes

Program Settings