Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12596 Beta vulgaris HOM05D006619 ORTHO05D008351 5.1e-108 394.4 201 100.0
EL10Ac5g12595 Beta vulgaris HOM05D006619 ORTHO05D008351 5.8e-51 204.9 272 48.2
AUR62017411 Chenopodium quinoa HOM05D006619 ORTHO05D008351 4.6e-40 168.7 262 42.0
AUR62010492 Chenopodium quinoa HOM05D006619 ORTHO05D008351 1.5e-38 163.7 258 41.1
Sc07g0008130 Simmondsia chinensis HOM05D006619 ORTHO05D008351 1.1e-30 137.5 258 38.8
Ah.12g058350 Amaranthus hybridus HOM05D006619 ORTHO05D008351 2.4e-28 129.8 265 35.8
GSVIVG01036901001 Vitis vinifera HOM05D006619 ORTHO05D008351 7.6e-27 124.8 300 32.3
Lsat_1_v5_gn_3_19920 Lactuca sativa HOM05D006619 ORTHO05D008351 9.9e-27 124.4 238 34.5
Prupe.5G014600 Prunus persica HOM05D006619 ORTHO05D008351 9.9e-27 124.4 282 32.6
Ciclev10001580m.g Citrus clementina HOM05D006619 ORTHO05D008351 3.2e-25 119.4 273 33.3
Hund14312 Selenicereus undatus HOM05D006619 ORTHO05D008351 3.2e-25 119.4 263 33.8
TAR629G0027 Trochodendron aralioides HOM05D006619 ORTHO05D008351 1.2e-24 117.5 303 31.4
MD06G1011900 Malus domestica HOM05D006619 ORTHO05D008351 1.6e-24 117.1 296 31.4
Glyma.01G152500 Glycine max HOM05D006619 ORTHO05D008351 2.7e-24 116.3 262 30.5
Glyma.09G217700 Glycine max HOM05D006619 ORTHO05D008351 6.0e-24 115.2 262 31.7
Manes.17G002400 Manihot esculenta HOM05D006619 ORTHO05D008351 6.0e-24 115.2 289 31.1
Solyc08g075150.3 Solanum lycopersicum HOM05D006619 ORTHO05D008351 7.8e-24 114.8 294 31.0
PSO017G2194 Papaver somniferum HOM05D006619 ORTHO05D008351 1.3e-23 114.0 295 32.2
Dinv37439 Davidia involucrata HOM05D006619 ORTHO05D008351 1.7e-23 113.6 296 31.8
HanXRQChr06g0173221 Helianthus annuus HOM05D006619 ORTHO05D008351 3.0e-23 112.8 266 31.2
Potri.004G234300 Populus trichocarpa HOM05D006619 ORTHO05D008351 3.0e-23 112.8 265 31.7
Lj2g0025157 Lotus japonicus HOM05D006619 ORTHO05D008351 3.9e-23 112.5 260 30.8
Atru.chr6.2146 Acer truncatum HOM05D006619 ORTHO05D008351 5.1e-23 112.1 104 55.8
FAN13G0980 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.9e-22 110.2 276 30.8
Lalb_Chr05g0215221 Lupinus albus HOM05D006619 ORTHO05D008351 1.9e-22 110.2 271 28.4
Thecc.03G321400 Theobroma cacao HOM05D006619 ORTHO05D008351 3.3e-22 109.4 306 29.4
Nn1g09329 Nelumbo nucifera HOM05D006619 ORTHO05D008351 4.3e-22 109.0 167 37.7
Nitab4.5_0000236g0060 Nicotiana tabacum HOM05D006619 ORTHO05D008351 4.3e-22 109.0 272 30.5
PSO170G1900 Papaver somniferum HOM05D006619 ORTHO05D008351 5.6e-22 108.6 99 57.6
Peaxi162Scf00014g02116 Petunia axillaris HOM05D006619 ORTHO05D008351 7.3e-22 108.2 289 30.1
FAN04G1190 Fragaria x ananassa HOM05D006619 ORTHO05D008351 9.6e-22 107.8 96 55.2
Medtr5g025800 Medicago truncatula HOM05D006619 ORTHO05D008351 9.6e-22 107.8 272 29.0
TPR.G7876 Trifolium pratense HOM05D006619 ORTHO05D008351 9.6e-22 107.8 271 29.2
Rhsim07G0140900 Rhododendron simsii HOM05D006619 ORTHO05D008351 1.2e-21 107.5 303 31.0
Duzib084G0833 Durio zibethinus HOM05D006619 ORTHO05D008351 1.6e-21 107.1 301 28.9
Nitab4.5_0000975g0010 Nicotiana tabacum HOM05D006619 ORTHO05D008351 1.6e-21 107.1 270 30.4
Psat0s808g0080 Pisum sativum HOM05D006619 ORTHO05D008351 1.6e-21 107.1 269 28.6
Sabra01G0179200 Salix brachista HOM05D006619 ORTHO05D008351 1.6e-21 107.1 289 29.4
COL.COLO4_16736 Corchorus olitorius HOM05D006619 ORTHO05D008351 2.8e-21 106.3 279 30.1
FvH4_5g24810 Fragaria vesca HOM05D006619 ORTHO05D008351 4.7e-21 105.5 101 53.5
FAN18G2839 Fragaria x ananassa HOM05D006619 ORTHO05D008351 4.7e-21 105.5 101 53.5
Lj8A366T23 Lonicera japonica HOM05D006619 ORTHO05D008351 4.7e-21 105.5 285 31.6
Phvul.002G123000 Phaseolus vulgaris HOM05D006619 ORTHO05D008351 4.7e-21 105.5 244 31.6
RcHm_v2.0_Chr7g0215151 Rosa chinensis HOM05D006619 ORTHO05D008351 4.7e-21 105.5 83 61.4
Sopen08g023780 Solanum pennellii HOM05D006619 ORTHO05D008351 1.1e-20 104.4 100 54.0
FAN08G1468 Fragaria x ananassa HOM05D006619 ORTHO05D008351 1.4e-20 104.0 101 54.5
Gohir.A08G148300 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.4e-20 104.0 284 28.2
Gohir.D08G169400 Gossypium hirsutum HOM05D006619 ORTHO05D008351 1.4e-20 104.0 284 28.2
Gorai.004G176600 Gossypium raimondii HOM05D006619 ORTHO05D008351 1.4e-20 104.0 284 28.2
CANSAT35G0271 Cannabis sativa HOM05D006619 ORTHO05D008351 2.4e-20 103.2 85 61.2
TWI60G1390 Tripterygium wilfordii HOM05D006619 ORTHO05D008351 3.1e-20 102.8 293 29.7
Eucgr.D02571 Eucalyptus grandis HOM05D006619 ORTHO05D008351 4.0e-20 102.4 140 40.0
PGR031G2471 Punica granatum HOM05D006619 ORTHO05D008351 4.0e-20 102.4 84 59.5
Haze_08039 Corylus avellana HOM05D006619 ORTHO05D008351 5.3e-20 102.1 242 30.6
Haze_08049 Corylus avellana HOM05D006619 ORTHO05D008351 5.3e-20 102.1 242 30.6
PGSC0003DMG400020810 Solanum tuberosum HOM05D006619 ORTHO05D008351 6.9e-20 101.7 100 51.0
ATR0568G188 Amborella trichopoda HOM05D006619 ORTHO05D008351 9.0e-20 101.3 254 31.5
arahy.Tifrunner.gnm1.ann1.7E2RQS Arachis hypogaea HOM05D006619 ORTHO05D008351 9.0e-20 101.3 230 30.9
arahy.Tifrunner.gnm1.ann1.TY5C82 Arachis hypogaea HOM05D006619 ORTHO05D008351 9.0e-20 101.3 230 30.9
Cfa012616 Carpinus fangiana HOM05D006619 ORTHO05D008351 9.0e-20 101.3 270 31.1
VMungo1215G3049 Vigna mungo HOM05D006619 ORTHO05D008351 9.0e-20 101.3 225 33.3
CSS0018284 Camellia sinensis var. sinensis HOM05D006619 ORTHO05D008351 1.5e-19 100.5 81 60.5
Ca_25054_v3 Cicer arietinum L. HOM05D006619 ORTHO05D008351 1.5e-19 100.5 135 42.2
Lalb_Chr16g0380481 Lupinus albus HOM05D006619 ORTHO05D008351 2.6e-19 99.8 278 28.1
ECA246G4124 Erigeron canadensis HOM05D006619 ORTHO05D008351 1.7e-18 97.1 269 28.6
CiPaw.11G070000 Carya illinoinensis HOM05D006619 ORTHO05D008351 2.2e-18 96.7 279 30.8
Manes.15G190475 Manihot esculenta HOM05D006619 ORTHO05D008351 2.2e-18 96.7 90 54.4
DCAR_004540 Daucus carota HOM05D006619 ORTHO05D008351 2.9e-18 96.3 102 49.0
SEGI_11154 Sequoiadendron giganteum HOM05D006619 ORTHO05D008351 3.8e-18 95.9 99 52.5
Oeu045949.2 Olea europaea HOM05D006619 ORTHO05D008351 4.9e-18 95.5 92 50.0
Actinidia18172 Actinidia chinensis HOM05D006619 ORTHO05D008351 6.4e-18 95.1 91 49.5
Migut.E01382 Erythranthe guttata HOM05D006619 ORTHO05D008351 1.1e-17 94.4 252 27.4
ClCG11G016190 Citrullus lanatus HOM05D006619 ORTHO05D008351 2.4e-17 93.2 142 41.5
Sed0005654 Sechium edule HOM05D006619 ORTHO05D008351 5.4e-17 92.0 153 37.9
MELO3C010535.2 Cucumis melo HOM05D006619 ORTHO05D008351 1.6e-16 90.5 135 40.7
Aqoxy3G01986 Aquilegia oxysepala HOM05D006619 ORTHO05D008351 2.1e-16 90.1 92 51.1
CsaV3_4G014810 Cucumis sativus L. HOM05D006619 ORTHO05D008351 2.1e-16 90.1 147 40.8
QL12p003333 Quercus lobata HOM05D006619 ORTHO05D008351 2.1e-16 90.1 111 44.1
Sed0000478 Sechium edule HOM05D006619 ORTHO05D008351 4.6e-16 89.0 152 36.2
SGA_v2.0_scaffold121G33054 Striga asiatica HOM05D006619 ORTHO05D008351 3.9e-15 85.9 210 29.5
HPP92_015143 Vanilla planifolia HOM05D000346 ORTHO05D004932 1.9e-14 83.6 200 32.5
Cpa.g.sc137.4 Carica papaya HOM05D006619 ORTHO05D008351 2.5e-14 83.2 92 44.6
SHI32758 Sapria himalayana HOM05D006619 ORTHO05D008351 2.1e-13 80.1 202 32.2
THA.LOC104811203 Tarenaya hassleriana HOM05D006619 ORTHO05D008351 2.8e-13 79.7 301 26.2
Duzib205G1329 Durio zibethinus HOM05D006619 ORTHO05D008351 6.2e-13 78.6 84 50.0
Carub.0008s0284 Capsella rubella HOM05D006619 ORTHO05D008351 1.8e-12 77.0 109 43.1
SalBow1G1985 Salvia bowleyana HOM05D006619 ORTHO05D008351 1.8e-12 77.0 133 40.6
AL8G13490 Arabidopsis lyrata HOM05D006619 ORTHO05D008351 3.1e-12 76.3 91 40.7
AT5G45310 Arabidopsis thaliana HOM05D006619 ORTHO05D008351 3.1e-12 76.3 87 42.5
CARHR176830 Cardamine hirsuta HOM05D006619 ORTHO05D008351 4.0e-12 75.9 136 33.1
Cc08_g06080 Coffea canephora HOM05D006619 ORTHO05D008351 4.0e-12 75.9 96 43.8
A09p21640 Brassica napus HOM05D006619 ORTHO05D008351 6.9e-12 75.1 87 42.5
BraA09t37763Z Brassica rapa HOM05D006619 ORTHO05D008351 6.9e-12 75.1 87 42.5
SalBow8G3333 Salvia bowleyana HOM05D006619 ORTHO05D008351 6.9e-12 75.1 133 39.8
BcaB07g30899 Brassica carinata HOM05D006619 ORTHO05D008351 1.2e-11 74.3 87 41.4
BcaC04g21786 Brassica carinata HOM05D006619 ORTHO05D008351 1.2e-11 74.3 87 41.4
C09p27640 Brassica napus HOM05D006619 ORTHO05D008351 1.2e-11 74.3 87 41.4
BolC9t55627H Brassica oleracea HOM05D006619 ORTHO05D008351 1.2e-11 74.3 87 41.4
CDE01G0342 Ceratophyllum demersum HOM05D006619 ORTHO05D008351 1.2e-11 74.3 271 25.8
Sp2g10250 Schrenkiella parvula HOM05D006619 ORTHO05D008351 1.5e-11 73.9 87 41.4
Thhalv10001132m.g Eutrema salsugineum HOM05D006619 ORTHO05D008351 2.0e-11 73.6 87 40.2
Aa31LG9G7710 Aethionema arabicum HOM05D006619 ORTHO05D008351 3.4e-11 72.8 127 37.0
Hund28917 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.4e-09 66.6 60 61.7
Hund28918 Selenicereus undatus HOM05D006619 ORTHO05D008351 2.4e-09 66.6 60 61.7
SMO367G0687 Selaginella moellendorffii HOM05D003392 ORTHO05D003801 3.2e-09 66.2 70 50.0
AagrBONN_evm.TU.Sc2ySwM_117.1666 Anthoceros agrestis HOM05D006619 ORTHO05D008351 4.2e-09 65.9 81 42.0
AagrBONN_evm.TU.Sc2ySwM_344.2089 Anthoceros agrestis HOM05D006619 ORTHO05D008351 5.4e-09 65.5 81 40.7
Pp3c25_50 Physcomitrium patens HOM05D006619 ORTHO05D008351 5.4e-09 65.5 95 42.1
Dinv09413 Davidia involucrata HOM05D006619 ORTHO05D008351 1.3e-07 60.8 84 47.6
QL12p003340 Quercus lobata HOM05D006619 ORTHO05D008351 1.3e-07 60.8 88 43.2


User provided reference genes

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