Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 7.8e-180 633.6 313 100.0
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 1.7e-105 386.7 316 65.5
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 1.8e-104 383.3 316 64.2
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 3.5e-103 379.0 316 63.9
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 6.1e-84 315.1 300 57.3
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 5.0e-78 295.4 292 52.7
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 4.3e-77 292.4 291 52.6
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 7.3e-77 291.6 286 53.5
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 9.5e-77 291.2 280 53.2
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 1.2e-76 290.8 289 52.9
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 2.8e-76 289.7 288 51.4
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.8e-76 289.7 291 51.9
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 1.1e-75 287.7 308 49.0
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 1.8e-75 287.0 291 51.5
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 3.1e-75 286.2 307 50.5
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 3.1e-75 286.2 303 52.1
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 1.5e-74 283.9 282 52.8
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 2.0e-74 283.5 280 53.6
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 2.6e-74 283.1 293 51.2
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 5.8e-74 282.0 320 49.4
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 1.3e-73 280.8 283 50.2
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 1.7e-73 280.4 289 50.5
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 1.7e-73 280.4 290 51.0
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 1.7e-73 280.4 284 51.4
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 1.7e-73 280.4 284 51.4
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 3.7e-73 279.3 285 50.9
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 3.7e-73 279.3 284 51.4
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 4.9e-73 278.9 280 52.1
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 3.2e-72 276.2 283 50.9
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 9.2e-72 274.6 283 49.8
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 1.6e-71 273.9 311 47.9
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 2.1e-71 273.5 274 51.8
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 6.0e-71 271.9 283 50.9
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 6.0e-71 271.9 278 51.4
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 1.3e-70 270.8 273 50.5
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 2.3e-70 270.0 295 49.2
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 2.3e-70 270.0 308 47.1
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 2.3e-70 270.0 285 49.8
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 6.6e-70 268.5 308 46.8
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 8.6e-70 268.1 280 48.6
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 1.5e-69 267.3 286 50.0
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 3.3e-69 266.2 304 48.0
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 5.6e-69 265.4 286 51.0
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 7.3e-69 265.0 283 50.9
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 9.5e-69 264.6 296 48.6
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 1.2e-68 264.2 296 49.0
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 1.6e-68 263.8 280 50.0
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 1.6e-68 263.8 296 48.3
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 1.6e-68 263.8 273 49.8
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 2.1e-68 263.5 296 48.6
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 2.1e-68 263.5 279 50.9
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 4.7e-68 262.3 283 48.4
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 8.1e-68 261.5 277 49.8
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 8.1e-68 261.5 260 51.5
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 1.1e-67 261.2 286 50.3
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 1.4e-67 260.8 326 45.1
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 2.3e-67 260.0 275 49.5
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 5.2e-67 258.8 276 47.5
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 1.2e-66 257.7 276 47.1
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 2.0e-66 256.9 276 49.6
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 4.4e-66 255.8 260 52.7
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 4.4e-66 255.8 286 49.0
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 5.8e-66 255.4 292 48.6
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 5.8e-66 255.4 275 48.0
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 1.7e-65 253.8 275 48.7
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 2.2e-65 253.4 260 51.5
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 2.9e-65 253.1 297 45.5
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 2.9e-65 253.1 363 40.2
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 4.9e-65 252.3 282 50.0
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 1.4e-64 250.8 289 48.1
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 2.1e-63 246.9 257 49.0
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 2.1e-63 246.9 257 49.0
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 3.5e-63 246.1 285 47.4
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 4.6e-63 245.7 285 47.0
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 6.0e-63 245.4 299 45.5
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 7.8e-63 245.0 285 47.0
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 7.8e-63 245.0 285 47.0
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 7.8e-63 245.0 285 47.0
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 7.8e-63 245.0 295 45.4
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 3.0e-62 243.0 283 48.8
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 3.9e-62 242.7 285 47.4
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 3.9e-62 242.7 284 47.9
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 5.1e-62 242.3 285 46.7
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 8.6e-62 241.5 309 45.0
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 2.5e-61 240.0 281 45.9
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 3.3e-61 239.6 309 43.4
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 3.3e-61 239.6 282 47.2
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 4.3e-61 239.2 286 46.2
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 4.3e-61 239.2 313 44.4
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 5.6e-61 238.8 257 49.0
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 7.3e-61 238.4 281 47.3
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 3.6e-60 236.1 312 41.0
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 3.6e-60 236.1 282 46.5
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 6.2e-60 235.3 284 46.5
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 2.4e-59 233.4 282 44.3
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 1.3e-57 227.6 277 45.1
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 6.4e-57 225.3 255 46.3
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 8.4e-57 224.9 254 46.5
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 4.2e-56 222.6 256 46.1
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 5.4e-56 222.2 294 43.5
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 6.0e-55 218.8 255 45.1
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 3.0e-54 216.5 286 44.4
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.9e-53 213.8 275 40.4
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 4.3e-53 212.6 290 39.3
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 9.6e-53 211.5 223 48.4
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 8.1e-52 208.4 288 40.3
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 1.5e-50 204.1 308 37.7
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 6.6e-46 188.7 291 37.5
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.1e-45 188.0 297 36.7
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 2.5e-45 186.8 253 41.1
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 2.0e-42 177.2 314 37.9
Cpa.g.sc39.45 Carica papaya HOM05D006780 ORTHO05D008455 2.5e-32 143.7 130 52.3
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 2.6e-26 123.6 271 27.3
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 7.6e-26 122.1 246 29.7
CSS0031860 Camellia sinensis var. sinensis HOM05D001955 ORTHO05D001917 2.2e-17 94.0 82 51.2
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 1.2e-15 88.2 260 26.9
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 1.2e-15 88.2 223 26.0
Os10g0569000 Oryza sativa ssp. japonica HOM05D006780 ORTHO05D008455 2.2e-12 77.4 104 39.4


User provided reference genes

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