Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12579 Beta vulgaris HOM05D006098 ORTHO05D007470 2.7e-272 941.4 483 100.0
AUR62010477 Chenopodium quinoa HOM05D006098 ORTHO05D007470 3.9e-239 831.2 484 88.8
AUR62030416 Chenopodium quinoa HOM05D006098 ORTHO05D007470 1.1e-233 813.1 516 82.9
Ah.12g058500 Amaranthus hybridus HOM05D006098 ORTHO05D007470 2.6e-230 802.0 485 85.6
GSVIVG01036872001 Vitis vinifera HOM05D006098 ORTHO05D007470 1.1e-175 620.5 412 75.7
Dinv41811 Davidia involucrata HOM05D006098 ORTHO05D007470 1.5e-169 600.1 417 74.1
COL.COLO4_10360 Corchorus olitorius HOM05D006098 ORTHO05D007470 8.1e-168 594.3 408 75.7
Nn1g09368 Nelumbo nucifera HOM05D006098 ORTHO05D007470 9.0e-167 590.9 399 74.9
Thecc.03G318000 Theobroma cacao HOM05D006098 ORTHO05D007470 1.5e-166 590.1 392 77.0
Duzib205G1615 Durio zibethinus HOM05D006098 ORTHO05D007470 7.6e-166 587.8 392 77.0
Atru.chr8.2640 Acer truncatum HOM05D006098 ORTHO05D007470 1.7e-165 586.6 382 76.4
CSS0030969 Camellia sinensis var. sinensis HOM05D006098 ORTHO05D007470 2.9e-165 585.9 443 68.8
Cpa.g.sc71.63 Carica papaya HOM05D006098 ORTHO05D007470 8.4e-165 584.3 391 76.0
TAR629G3250 Trochodendron aralioides HOM05D006098 ORTHO05D007470 5.4e-164 581.6 391 76.0
Gorai.008G220000 Gossypium raimondii HOM05D006098 ORTHO05D007470 7.1e-164 581.3 394 76.1
Manes.15G184300 Manihot esculenta HOM05D006098 ORTHO05D007470 6.0e-163 578.2 409 72.9
Actinidia01257 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.3e-162 576.2 403 72.5
Potri.001G193400 Populus trichocarpa HOM05D006098 ORTHO05D007470 1.9e-161 573.2 410 71.2
Rhsim11G0034900 Rhododendron simsii HOM05D006098 ORTHO05D007470 5.6e-161 571.6 413 70.7
Peaxi162Scf00045g00071 Petunia axillaris HOM05D006098 ORTHO05D007470 9.6e-161 570.9 392 72.2
Gorai.004G178500 Gossypium raimondii HOM05D006098 ORTHO05D007470 1.6e-160 570.1 408 72.5
Lsat_1_v5_gn_3_19721 Lactuca sativa HOM05D006098 ORTHO05D007470 2.4e-159 566.2 448 64.5
PGSC0003DMG400018483 Solanum tuberosum HOM05D006098 ORTHO05D007470 4.0e-159 565.5 393 72.5
Oeu057164.1 Olea europaea HOM05D006098 ORTHO05D007470 5.3e-159 565.1 388 73.7
Potri.003G033300 Populus trichocarpa HOM05D006098 ORTHO05D007470 5.3e-159 565.1 390 72.8
Actinidia14735 Actinidia chinensis HOM05D006098 ORTHO05D007470 6.9e-159 564.7 408 71.1
vmacro00080 Vaccinium macrocarpon HOM05D006098 ORTHO05D007470 3.4e-158 562.4 379 75.2
Oeu042191.1 Olea europaea HOM05D006098 ORTHO05D007470 4.5e-158 562.0 391 72.4
Oeu042192.1 Olea europaea HOM05D006098 ORTHO05D007470 4.5e-158 562.0 391 72.4
Nn7g37397 Nelumbo nucifera HOM05D006098 ORTHO05D007470 1.3e-157 560.5 410 69.8
ECA246G0847 Erigeron canadensis HOM05D006098 ORTHO05D007470 2.2e-157 559.7 413 69.5
Gohir.A08G150000 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.2e-157 559.7 408 71.1
DCAR_028369 Daucus carota HOM05D006098 ORTHO05D007470 3.8e-157 558.9 374 73.5
PGR031G3371 Punica granatum HOM05D006098 ORTHO05D007470 3.8e-157 558.9 392 74.0
Cc08_g05440 Coffea canephora HOM05D006098 ORTHO05D007470 1.1e-156 557.4 458 63.5
Sopen08g001580 Solanum pennellii HOM05D006098 ORTHO05D007470 1.1e-156 557.4 372 73.9
Nitab4.5_0011712g0010 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.9e-156 556.6 458 64.8
Sabra01G0135500 Salix brachista HOM05D006098 ORTHO05D007470 4.2e-156 555.4 411 69.8
Actinidia18166 Actinidia chinensis HOM05D006098 ORTHO05D007470 7.1e-156 554.7 391 72.1
Duzib068G0239 Durio zibethinus HOM05D006098 ORTHO05D007470 7.1e-156 554.7 400 72.5
Solyc08g005560.3 Solanum lycopersicum HOM05D006098 ORTHO05D007470 2.1e-155 553.1 390 71.5
SalBow4G1396 Salvia bowleyana HOM05D006098 ORTHO05D007470 6.0e-155 551.6 414 68.4
CAN.G884.9 Capsicum annuum HOM05D006098 ORTHO05D007470 7.9e-155 551.2 463 63.9
Peaxi162Scf00053g00062 Petunia axillaris HOM05D006098 ORTHO05D007470 1.3e-154 550.4 470 62.6
Nitab4.5_0000985g0060 Nicotiana tabacum HOM05D006098 ORTHO05D007470 5.1e-154 548.5 455 64.6
Oeu046790.1 Olea europaea HOM05D006098 ORTHO05D007470 8.7e-154 547.7 372 73.4
CAN.G1026.8 Capsicum annuum HOM05D006098 ORTHO05D007470 1.5e-153 547.0 454 64.1
MBI15_g33454_MAGBIO Magnolia biondii HOM05D006098 ORTHO05D007470 2.5e-153 546.2 362 76.8
Solyc08g075520.4 Solanum lycopersicum HOM05D006098 ORTHO05D007470 3.3e-153 545.8 392 70.4
Lj8A337G13 Lonicera japonica HOM05D006098 ORTHO05D007470 7.4e-153 544.7 359 76.9
FvH4_2g37220 Fragaria vesca HOM05D006098 ORTHO05D007470 9.6e-153 544.3 410 69.3
THA.LOC104811082 Tarenaya hassleriana HOM05D006098 ORTHO05D007470 9.6e-153 544.3 412 69.9
HanXRQChr13g0411151 Helianthus annuus HOM05D006098 ORTHO05D007470 1.6e-152 543.5 412 68.9
Rhsim11G0035500 Rhododendron simsii HOM05D006098 ORTHO05D007470 2.8e-152 542.7 507 59.6
FAN20G1855 Fragaria x ananassa HOM05D006098 ORTHO05D007470 3.7e-152 542.3 410 69.5
RcHm_v2.0_Chr6g0304491 Rosa chinensis HOM05D006098 ORTHO05D007470 8.1e-152 541.2 410 69.0
FAN27G2650 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.1e-151 540.8 387 71.3
CAN.G884.14 Capsicum annuum HOM05D006098 ORTHO05D007470 3.1e-151 539.3 463 61.6
ECA240G1264 Erigeron canadensis HOM05D006098 ORTHO05D007470 1.5e-150 537.0 390 70.8
HanXRQChr17g0537231 Helianthus annuus HOM05D006098 ORTHO05D007470 4.5e-150 535.4 413 68.0
Nitab4.5_0001175g0140 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.3e-149 533.9 499 59.5
HanXRQChr03g0081041 Helianthus annuus HOM05D006098 ORTHO05D007470 2.2e-149 533.1 411 68.4
Lsat_1_v5_gn_5_57121 Lactuca sativa HOM05D006098 ORTHO05D007470 2.2e-149 533.1 424 66.5
FAN15G0890 Fragaria x ananassa HOM05D006098 ORTHO05D007470 2.9e-149 532.7 390 71.3
SGA_v2.0_scaffold111G31352 Striga asiatica HOM05D006098 ORTHO05D007470 4.9e-149 531.9 409 66.7
MSTRG.1762 Avicennia marina HOM05D006098 ORTHO05D007470 6.4e-149 531.6 371 72.8
Nitab4.5_0000898g0120 Nicotiana tabacum HOM05D006098 ORTHO05D007470 8.4e-149 531.2 403 68.0
Actinidia32783 Actinidia chinensis HOM05D006098 ORTHO05D007470 2.5e-148 529.6 402 68.4
Migut.A00537 Erythranthe guttata HOM05D006098 ORTHO05D007470 4.2e-148 528.9 402 67.2
Dinv37422 Davidia involucrata HOM05D006098 ORTHO05D007470 2.3e-146 523.1 342 77.5
ATR0568G039 Amborella trichopoda HOM05D006098 ORTHO05D007470 1.5e-145 520.4 390 69.5
Nitab4.5_0000030g0370 Nicotiana tabacum HOM05D006098 ORTHO05D007470 1.9e-145 520.0 475 60.4
Sabra03G0019100 Salix brachista HOM05D006098 ORTHO05D007470 5.6e-145 518.5 485 58.6
Gohir.D12G205100 Gossypium hirsutum HOM05D006098 ORTHO05D007470 2.8e-144 516.2 330 79.1
Gohir.A12G202400 Gossypium hirsutum HOM05D006098 ORTHO05D007470 1.4e-143 513.8 330 78.8
PSO541G2197 Papaver somniferum HOM05D006098 ORTHO05D007470 1.4e-143 513.8 408 65.4
PSO675G7908 Papaver somniferum HOM05D006098 ORTHO05D007470 4.0e-143 512.3 408 65.4
AT4G19160 Arabidopsis thaliana HOM05D006098 ORTHO05D007470 2.1e-139 500.0 387 66.4
Carub.0007s2199 Capsella rubella HOM05D006098 ORTHO05D007470 8.2e-136 488.0 388 64.2
SalBow8G2199 Salvia bowleyana HOM05D006098 ORTHO05D007470 8.2e-136 488.0 426 61.3
AL7G34930 Arabidopsis lyrata HOM05D006098 ORTHO05D007470 1.4e-135 487.3 388 64.9
CDE01G0744 Ceratophyllum demersum HOM05D006098 ORTHO05D007470 4.5e-134 482.3 412 61.7
Aa31LG6G1850 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.3e-133 480.7 395 63.5
Sp7g17860 Schrenkiella parvula HOM05D006098 ORTHO05D007470 2.8e-128 463.0 405 62.2
SEGI_14227 Sequoiadendron giganteum HOM05D006098 ORTHO05D007470 6.9e-127 458.4 405 59.3
unitig_37.g12121 Utricularia gibba HOM05D006098 ORTHO05D007470 6.9e-127 458.4 395 61.8
Thhalv10025127m.g Eutrema salsugineum HOM05D006098 ORTHO05D007470 6.5e-125 451.8 418 60.5
BcaNung04007 Brassica carinata HOM05D006098 ORTHO05D007470 1.9e-124 450.3 457 56.5
CARHR226030 Cardamine hirsuta HOM05D006098 ORTHO05D007470 2.5e-124 449.9 437 58.4
BcaC09g51434 Brassica carinata HOM05D006098 ORTHO05D007470 9.4e-124 448.0 415 61.0
C01p13160 Brassica napus HOM05D006098 ORTHO05D007470 7.9e-123 444.9 416 60.8
BolC1t01289H Brassica oleracea HOM05D006098 ORTHO05D007470 1.8e-122 443.7 415 61.0
Peaxi162Scf00876g00435 Petunia axillaris HOM05D006098 ORTHO05D007470 6.7e-122 441.8 365 63.8
BraA01t01058Z Brassica rapa HOM05D006098 ORTHO05D007470 8.2e-120 434.9 395 62.5
A01p11120 Brassica napus HOM05D006098 ORTHO05D007470 2.4e-119 433.3 408 60.3
Manes.17G016300 Manihot esculenta HOM05D006098 ORTHO05D007470 2.0e-118 430.3 402 60.4
Sopen08g024170 Solanum pennellii HOM05D006098 ORTHO05D007470 2.2e-112 410.2 315 66.3
PGSC0003DMG400016110 Solanum tuberosum HOM05D006098 ORTHO05D007470 8.2e-112 408.3 315 66.7
BcaC01g00601 Brassica carinata HOM05D006098 ORTHO05D007470 1.7e-109 400.6 432 54.6
C03p81800 Brassica napus HOM05D006098 ORTHO05D007470 4.2e-108 396.0 429 55.0
BolC3t20457H Brassica oleracea HOM05D006098 ORTHO05D007470 4.2e-108 396.0 429 55.0
A08p14200 Brassica napus HOM05D006098 ORTHO05D007470 4.0e-106 389.4 399 57.6
BraA08t33414Z Brassica rapa HOM05D006098 ORTHO05D007470 4.0e-106 389.4 399 57.6
BcaB04g18531 Brassica carinata HOM05D006098 ORTHO05D007470 4.4e-105 386.0 428 53.3
CAN.G947.35 Capsicum annuum HOM05D006098 ORTHO05D007470 2.1e-99 367.1 355 58.0
Gohir.D08G171101 Gossypium hirsutum HOM05D006098 ORTHO05D007470 4.4e-89 332.8 234 71.8
Hund11040 Selenicereus undatus HOM05D006098 ORTHO05D007470 2.2e-88 330.5 483 46.2
FAN27G0800 Fragaria x ananassa HOM05D006098 ORTHO05D007470 1.3e-80 304.7 239 68.2
MSTRG.13909 Avicennia marina HOM05D006098 ORTHO05D007470 1.1e-76 291.6 215 67.0
AagrBONN_evm.TU.Sc2ySwM_368.631 Anthoceros agrestis HOM05D006098 ORTHO05D007470 2.3e-69 267.3 362 40.9
HanXRQChr05g0158621 Helianthus annuus HOM05D006098 ORTHO05D007470 1.3e-61 241.5 159 78.0
SMO364G0549 Selaginella moellendorffii HOM05D006098 ORTHO05D007470 1.7e-56 224.6 378 36.8
Pp3c12_14620 Physcomitrium patens HOM05D006098 ORTHO05D007470 3.8e-56 223.4 393 36.4
FvH4_2g37180 Fragaria vesca HOM05D006098 ORTHO05D007470 1.3e-53 214.9 139 77.7
Rhsim11G0035700 Rhododendron simsii HOM05D006098 ORTHO05D007470 1.5e-44 184.9 414 35.7
HanXRQChr11g0344761 Helianthus annuus HOM05D006098 ORTHO05D007470 5.6e-44 183.0 126 73.8
Eucgr.D02551 Eucalyptus grandis HOM05D006098 ORTHO05D007470 2.1e-43 181.0 109 80.7
HanXRQChr09g0271561 Helianthus annuus HOM05D006098 ORTHO05D007470 2.8e-43 180.6 123 74.8
Oeu015533.1 Olea europaea HOM05D006098 ORTHO05D007470 5.4e-39 166.4 152 55.9
Oeu042198.1 Olea europaea HOM05D006098 ORTHO05D007470 1.8e-37 161.4 238 45.4
Eucgr.D02550 Eucalyptus grandis HOM05D006098 ORTHO05D007470 4.8e-35 153.3 121 60.3
Pp3c4_2130 Physcomitrium patens HOM05D006098 ORTHO05D007470 8.7e-29 132.5 320 30.0
Peaxi162Scf00527g00718 Petunia axillaris HOM05D006098 ORTHO05D007470 4.8e-27 126.7 213 38.5
HanXRQChr11g0344831 Helianthus annuus HOM05D006098 ORTHO05D007470 5.0e-24 116.7 78 73.1
RcHm_v2.0_Chr4g0402301 Rosa chinensis HOM05D006098 ORTHO05D007470 1.9e-23 114.8 126 53.2
Prupe.1G352900 Prunus persica HOM05D006098 ORTHO05D007470 5.1e-21 106.7 76 69.7
Aa31sc19G30 Aethionema arabicum HOM05D006098 ORTHO05D007470 3.7e-11 73.9 210 29.0
Cre14.g621850 Chlamydomonas reinhardtii HOM05D006098 ORTHO05D007470 1.1e-10 72.4 236 26.7
Aa31LG3G3710 Aethionema arabicum HOM05D006098 ORTHO05D007470 1.0e-08 65.9 72 48.6
Sc11g0006450 Simmondsia chinensis HOM05D007414 ORTHO05D009482 1.0e-08 65.9 259 25.5
Cc02_g30210 Coffea canephora HOM05D007414 ORTHO05D009482 1.9e-07 61.6 278 26.3
Potri.001G027600 Populus trichocarpa HOM05D007414 ORTHO05D009482 5.5e-07 60.1 384 24.2
AUR62032647 Chenopodium quinoa HOM05D007414 ORTHO05D009482 9.4e-07 59.3 270 24.4
AUR62026859 Chenopodium quinoa HOM05D007414 ORTHO05D009482 1.6e-06 58.5 270 24.1
ClCG01G007530 Citrullus lanatus HOM05D007414 ORTHO05D009482 1.6e-06 58.5 369 22.8
Nitab4.5_0004955g0030 Nicotiana tabacum HOM05D007414 ORTHO05D009482 1.6e-06 58.5 268 25.4
Ah.12g062800 Amaranthus hybridus HOM05D007414 ORTHO05D009482 2.1e-06 58.2 269 23.8
CsaV3_5G024500 Cucumis sativus L. HOM05D007414 ORTHO05D009482 2.1e-06 58.2 390 22.8
Hma1.2p1_1202F.1_g266840 Hydrangea macrophylla HOM05D007414 ORTHO05D009482 2.1e-06 58.2 378 21.7
Dinv22037 Davidia involucrata HOM05D007414 ORTHO05D009482 2.7e-06 57.8 272 24.3
Medtr3g014680 Medicago truncatula HOM05D007414 ORTHO05D009482 2.7e-06 57.8 279 23.3
Atru.chr12.1333 Acer truncatum HOM05D007414 ORTHO05D009482 3.6e-06 57.4 237 24.5
Ciclev10028543m.g Citrus clementina HOM05D007414 ORTHO05D009482 3.6e-06 57.4 236 25.8
Sabra01G0020000 Salix brachista HOM05D007414 ORTHO05D009482 6.1e-06 56.6 388 24.5


User provided reference genes

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