Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12394 Beta vulgaris HOM05D007599 ORTHO05D009548 2.9e-42 174.9 90 100.0
AUR62007084 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.9e-33 145.6 90 84.4
AUR62019947 Chenopodium quinoa HOM05D007599 ORTHO05D009548 1.9e-33 145.6 90 84.4
Sc07g0010220 Simmondsia chinensis HOM05D007599 ORTHO05D009548 1.6e-29 132.5 90 77.8
Lsat_1_v5_gn_3_11180 Lactuca sativa HOM05D007599 ORTHO05D009548 4.7e-29 131.0 90 77.8
GSVIVG01019698001 Vitis vinifera HOM05D007599 ORTHO05D009548 6.8e-28 127.1 90 75.6
Os02g0682600 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 8.9e-28 126.7 90 74.4
Oeu029803.1 Olea europaea HOM05D007599 ORTHO05D009548 2.0e-27 125.6 90 75.6
Sopen10g024670 Solanum pennellii HOM05D007599 ORTHO05D009548 5.8e-27 124.0 88 72.7
unitig_62.g23260 Utricularia gibba HOM05D007599 ORTHO05D009548 7.5e-27 123.6 88 76.1
AL2G14680 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 1.3e-26 122.9 88 68.2
Thhalv10019387m.g Eutrema salsugineum HOM05D007599 ORTHO05D009548 2.9e-26 121.7 73 76.7
HanXRQChr17g0534931 Helianthus annuus HOM05D007599 ORTHO05D009548 4.9e-26 120.9 88 72.7
Sed0012861 Sechium edule HOM05D007599 ORTHO05D009548 1.9e-25 119.0 85 75.3
Atru.chr9.1835 Acer truncatum HOM05D007599 ORTHO05D009548 3.2e-25 118.2 90 66.7
MSTRG.12224 Avicennia marina HOM05D007599 ORTHO05D009548 7.1e-25 117.1 80 78.8
Solyc08g083380.2 Solanum lycopersicum HOM05D007599 ORTHO05D009548 9.2e-25 116.7 88 70.5
ClCG01G001340 Citrullus lanatus HOM05D007599 ORTHO05D009548 2.7e-24 115.2 85 74.1
PGSC0003DMG400012109 Solanum tuberosum HOM05D007599 ORTHO05D009548 3.5e-24 114.8 88 71.6
Ciclev10023088m.g Citrus clementina HOM05D007599 ORTHO05D009548 5.1e-23 110.9 90 68.9
Mapoly0015s0046 Marchantia polymorpha HOM05D007599 ORTHO05D009548 4.3e-22 107.8 86 65.1
FAN18G2966 Fragaria x ananassa HOM05D007599 ORTHO05D009548 5.6e-22 107.5 109 54.1
AagrBONN_evm.TU.Sc2ySwM_117.1837 Anthoceros agrestis HOM05D007599 ORTHO05D009548 1.6e-21 105.9 86 62.8
MELO3C005802.2 Cucumis melo HOM05D007599 ORTHO05D009548 2.1e-21 105.5 85 69.4
CsaV3_5G001470 Cucumis sativus L. HOM05D007599 ORTHO05D009548 2.1e-21 105.5 85 69.4
FvH4_5g07140 Fragaria vesca HOM05D007599 ORTHO05D009548 3.6e-21 104.8 81 60.5
TPR.G21312 Trifolium pratense HOM05D007599 ORTHO05D009548 8.1e-21 103.6 86 61.6
Duzib084G0922 Durio zibethinus HOM05D007599 ORTHO05D009548 5.2e-20 100.9 79 65.8
FAN08G0537 Fragaria x ananassa HOM05D007599 ORTHO05D009548 5.2e-20 100.9 81 58.0
Gohir.A12G242400 Gossypium hirsutum HOM05D007599 ORTHO05D009548 1.2e-19 99.8 88 61.4
Migut.E00717 Erythranthe guttata HOM05D007599 ORTHO05D009548 4.4e-19 97.8 66 74.2
Pp3c25_10700 Physcomitrium patens HOM05D007599 ORTHO05D009548 4.4e-19 97.8 86 61.6
FAN13G2393 Fragaria x ananassa HOM05D007599 ORTHO05D009548 7.6e-19 97.1 76 59.2
Actinidia22230 Actinidia chinensis HOM05D007599 ORTHO05D009548 9.9e-19 96.7 90 62.2
Rhsim02G0254600 Rhododendron simsii HOM05D007599 ORTHO05D009548 1.7e-18 95.9 51 88.2
SGA_v2.0_scaffold88G27242 Striga asiatica HOM05D007599 ORTHO05D009548 1.7e-18 95.9 123 48.0
RcHm_v2.0_Chr7g0187811 Rosa chinensis HOM05D007599 ORTHO05D009548 2.2e-18 95.5 81 59.3
FAN08G0181 Fragaria x ananassa HOM05D007599 ORTHO05D009548 3.8e-18 94.7 142 41.5
Sabra16G0305100 Salix brachista HOM05D007599 ORTHO05D009548 1.0e-15 86.7 52 80.8
CAN.G567.112 Capsicum annuum HOM05D007599 ORTHO05D009548 1.3e-15 86.3 88 58.0
Os01g0932550 Oryza sativa ssp. japonica HOM05D007599 ORTHO05D009548 3.9e-15 84.7 51 78.4
AT1G61570 Arabidopsis thaliana HOM05D007599 ORTHO05D009548 6.6e-15 84.0 88 50.0
MCO15G174 Micromonas commoda HOM05D007599 ORTHO05D009548 8.7e-15 83.6 64 56.2
FvH4_5g10420 Fragaria vesca HOM05D007599 ORTHO05D009548 1.5e-14 82.8 81 53.1
Rhsim07G0075900 Rhododendron simsii HOM05D007599 ORTHO05D009548 2.5e-14 82.0 90 55.6
CDE11G1025 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 2.1e-13 79.0 88 51.1
Cre16.g650800 Chlamydomonas reinhardtii HOM05D007599 ORTHO05D009548 2.8e-13 78.6 85 42.4
PRCOL_00005458 Prasinoderma coloniale HOM05D007599 ORTHO05D009548 4.7e-13 77.8 74 44.6
Sp5g30310 Schrenkiella parvula HOM05D007599 ORTHO05D009548 6.2e-13 77.4 83 50.6
COL.COLO4_10843 Corchorus olitorius HOM05D007599 ORTHO05D009548 8.1e-13 77.0 87 51.7
Carub.0002s0362 Capsella rubella HOM05D007599 ORTHO05D009548 1.4e-12 76.3 90 47.8
CDE09G0527 Ceratophyllum demersum HOM05D007599 ORTHO05D009548 1.4e-12 76.3 88 47.7
CiPaw.12G074700 Carya illinoinensis HOM05D007599 ORTHO05D009548 2.4e-12 75.5 90 51.1
Duzib068G0772 Durio zibethinus HOM05D007599 ORTHO05D009548 3.1e-12 75.1 90 51.1
AagrBONN_evm.TU.Sc2ySwM_344.1292 Anthoceros agrestis HOM05D007599 ORTHO05D009548 4.0e-12 74.7 86 50.0
CANSAT21G1781 Cannabis sativa HOM05D007599 ORTHO05D009548 6.9e-12 73.9 86 50.0
Cc08_g17030 Coffea canephora HOM05D007599 ORTHO05D009548 9.0e-12 73.6 85 50.6
PSO135G0169 Papaver somniferum HOM05D007599 ORTHO05D009548 1.5e-11 72.8 90 51.1
PSO384G2353 Papaver somniferum HOM05D007599 ORTHO05D009548 1.5e-11 72.8 90 51.1
BcaC08g45594 Brassica carinata HOM05D007599 ORTHO05D009548 2.0e-11 72.4 90 47.8
FAN04G0849 Fragaria x ananassa HOM05D007599 ORTHO05D009548 2.0e-11 72.4 81 48.1
Manes.01G000403 Manihot esculenta HOM05D007599 ORTHO05D009548 2.6e-11 72.0 86 51.2
Gohir.D12G243500 Gossypium hirsutum HOM05D007599 ORTHO05D009548 1.3e-10 69.7 88 47.7
Gorai.008G260900 Gossypium raimondii HOM05D007599 ORTHO05D009548 1.3e-10 69.7 88 47.7
Manes.02G000300 Manihot esculenta HOM05D007599 ORTHO05D009548 1.3e-10 69.7 86 51.2
SHI06900 Sapria himalayana HOM05D007599 ORTHO05D009548 1.3e-10 69.7 46 65.2
C06p32780 Brassica napus HOM05D007599 ORTHO05D009548 3.8e-10 68.2 90 44.4
FAN13G0770 Fragaria x ananassa HOM05D007599 ORTHO05D009548 4.9e-10 67.8 81 46.9
AL1G56360 Arabidopsis lyrata HOM05D007599 ORTHO05D009548 8.4e-10 67.0 37 83.8
CSS0029258 Camellia sinensis var. sinensis HOM05D007599 ORTHO05D009548 1.1e-09 66.6 90 50.0
CBR_g48723 Chara braunii HOM05D007599 ORTHO05D009548 1.1e-09 66.6 86 46.5
BcaNung06629 Brassica carinata HOM05D007599 ORTHO05D009548 1.4e-09 66.2 89 43.8
TAR374G1499 Trochodendron aralioides HOM05D007599 ORTHO05D009548 1.4e-09 66.2 68 55.9
BcaC08g46942 Brassica carinata HOM05D007599 ORTHO05D009548 1.9e-09 65.9 84 45.2
C06p49140 Brassica napus HOM05D007599 ORTHO05D009548 1.9e-09 65.9 84 45.2
BolC6t38400H Brassica oleracea HOM05D007599 ORTHO05D009548 1.9e-09 65.9 90 43.3
BcaB02g07013 Brassica carinata HOM05D007599 ORTHO05D009548 2.4e-09 65.5 90 43.3
Actinidia27277 Actinidia chinensis HOM05D007599 ORTHO05D009548 4.2e-09 64.7 90 48.9
CARHR050820 Cardamine hirsuta HOM05D007599 ORTHO05D009548 4.2e-09 64.7 90 44.4
Nitab4.5_0000357g0300 Nicotiana tabacum HOM05D007599 ORTHO05D009548 4.2e-09 64.7 88 46.6
A07p29010 Brassica napus HOM05D007599 ORTHO05D009548 7.1e-09 63.9 89 42.7
BraA07t30541Z Brassica rapa HOM05D007599 ORTHO05D009548 7.1e-09 63.9 89 42.7
BolC6t39948H Brassica oleracea HOM05D001180 ORTHO05D001055 1.2e-08 63.2 82 43.9
Haze_27758 Corylus avellana HOM05D007599 ORTHO05D009548 1.6e-08 62.8 62 45.2
TWI60G1211 Tripterygium wilfordii HOM05D007599 ORTHO05D009548 4.6e-08 61.2 32 87.5
Haze_09213 Corylus avellana HOM05D007599 ORTHO05D009548 3.9e-07 58.2 86 43.0
A03p16580 Brassica napus HOM05D005222 ORTHO05D006230 8.7e-07 57.0 71 39.4
C03p19510 Brassica napus HOM05D005222 ORTHO05D006230 8.7e-07 57.0 71 39.4
BolC3t14332H Brassica oleracea HOM05D005222 ORTHO05D006230 8.7e-07 57.0 71 39.4
BraA03t10945Z Brassica rapa HOM05D005222 ORTHO05D006230 8.7e-07 57.0 71 39.4
MBI12_g00589_MAGBIO Magnolia biondii HOM05D007599 ORTHO05D009548 8.7e-07 57.0 51 56.9
Sp6g12920 Schrenkiella parvula HOM05D005222 ORTHO05D006230 4.3e-06 54.7 71 39.4


User provided reference genes

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