Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 0.0e+00 1583.5 788 100.0
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 0.0e+00 1307.4 787 82.3
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 0.0e+00 1297.3 787 82.0
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 0.0e+00 1244.2 789 78.3
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 0.0e+00 1140.2 790 71.8
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 4.8e-303 1044.3 791 65.4
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 6.1e-274 947.6 800 59.1
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.0e-269 932.6 784 59.7
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 2.3e-268 929.1 797 58.2
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 3.1e-265 918.7 804 58.0
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 3.4e-264 915.2 803 58.4
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.4e-264 915.2 804 58.5
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 8.3e-263 910.6 796 57.9
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 4.6e-261 904.8 803 58.4
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 6.0e-261 904.4 784 58.3
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 6.0e-261 904.4 795 57.4
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.0e-260 903.7 786 58.0
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 3.9e-260 901.7 794 57.4
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 3.9e-260 901.7 792 58.6
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 7.3e-259 897.5 787 58.4
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 1.1e-257 893.6 792 57.7
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 1.8e-257 892.9 794 56.8
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 2.0e-256 889.4 797 57.1
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 2.0e-256 889.4 792 57.4
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 3.4e-256 888.6 791 57.9
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.3e-255 886.7 803 57.5
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 2.2e-255 885.9 795 56.7
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 6.4e-255 884.4 794 56.8
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 8.3e-255 884.0 796 56.0
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 2.1e-253 879.4 792 56.4
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 4.6e-253 878.2 803 56.5
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 1.5e-251 873.2 792 55.9
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 1.9e-251 872.8 796 56.3
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 7.3e-251 870.9 791 57.3
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 4.7e-250 868.2 795 55.2
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 8.1e-250 867.5 790 56.7
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 1.1e-249 867.1 787 56.8
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 1.4e-249 866.7 801 55.7
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.4e-249 866.7 792 56.3
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 4.0e-249 865.1 846 53.1
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 2.0e-248 862.8 790 56.7
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 9.9e-248 860.5 790 56.6
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 1.3e-247 860.1 794 56.7
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.2e-247 859.4 789 53.6
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 2.9e-247 859.0 790 56.5
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 3.8e-247 858.6 804 54.9
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 3.8e-247 858.6 790 56.2
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 5.4e-246 854.7 851 53.3
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.1e-245 852.8 811 54.6
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 2.5e-243 845.9 811 54.7
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 9.6e-243 844.0 801 54.8
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 1.3e-242 843.6 791 55.4
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 3.6e-242 842.0 808 53.3
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 8.1e-242 840.9 790 54.2
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 1.1e-238 830.5 812 52.1
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 7.1e-238 827.8 796 53.4
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 1.0e-236 823.9 790 52.7
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 8.7e-236 820.8 846 50.2
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 9.6e-235 817.4 792 53.0
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 2.4e-230 802.7 649 62.2
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 3.9e-228 795.4 802 52.5
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 8.7e-228 794.3 796 52.0
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 2.5e-227 792.7 805 52.4
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 1.1e-225 787.3 798 51.9
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 4.0e-225 785.4 801 51.4
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 2.0e-224 783.1 797 51.7
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 8.4e-223 777.7 803 51.1
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 3.0e-220 769.2 795 51.2
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 3.9e-220 768.8 800 50.5
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 8.7e-220 767.7 796 50.9
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 1.9e-219 766.5 796 51.1
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 9.6e-219 764.2 801 51.2
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 9.6e-219 764.2 797 50.7
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 6.2e-218 761.5 794 50.9
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 5.3e-217 758.4 803 52.7
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 1.5e-216 756.9 800 49.8
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 1.7e-215 753.4 799 50.1
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 6.5e-215 751.5 638 60.5
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 1.8e-212 743.4 759 51.8
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 5.1e-212 741.9 795 49.9
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.8e-209 733.4 797 51.2
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 2.0e-208 729.9 795 49.7
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 4.5e-208 728.8 785 49.9
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 3.2e-206 722.6 712 53.5
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 1.8e-204 716.8 834 49.2
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.8e-204 716.8 797 50.6
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 2.3e-204 716.5 781 48.1
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.6e-192 677.2 810 45.9
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 2.2e-183 646.7 647 53.5
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 1.2e-179 634.4 670 50.6
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 7.5e-179 631.7 785 46.1
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 2.2e-178 630.2 583 55.6
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 9.4e-174 614.8 805 43.4
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 6.6e-151 538.9 604 50.8
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 1.9e-142 510.8 797 40.5
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 1.5e-118 431.4 792 37.1
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 2.5e-110 404.1 790 35.2
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 1.0e-106 392.1 839 34.7
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 1.3e-90 338.6 844 31.8
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 5.1e-87 326.6 248 65.3
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 8.8e-87 325.9 299 55.2
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 1.5e-86 325.1 416 45.7
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 5.2e-79 300.1 255 59.6
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 6.5e-74 283.1 285 49.1
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 3.2e-73 280.8 285 49.5
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 3.0e-71 274.2 274 54.7
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 2.8e-69 267.7 252 52.0
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 7.5e-54 216.5 184 62.5
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.8e-44 185.3 157 59.2
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 1.1e-41 176.0 224 41.5
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 4.0e-39 167.5 207 41.1
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 2.6e-38 164.9 168 50.0
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.1e-36 159.5 279 37.6
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 7.3e-33 146.7 980 22.9
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 2.5e-25 121.7 87 66.7
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 8.1e-16 90.1 117 42.7
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 2.6e-14 85.1 165 37.0
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 2.1e-11 75.5 139 33.8
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 3.0e-10 71.6 41 73.2
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 6.2e-08 63.9 67 40.3


User provided reference genes

Program Settings