Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 3.7e-189 664.8 362 100.0
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 2.3e-106 389.8 359 61.8
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 8.1e-96 354.8 303 67.0
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.1e-95 354.4 303 67.0
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 3.1e-87 326.2 384 53.4
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 7.1e-76 288.5 401 45.6
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 5.1e-74 282.3 395 44.8
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 8.7e-74 281.6 391 47.3
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 1.5e-73 280.8 390 45.9
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.6e-72 277.3 389 46.8
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 2.8e-72 276.6 423 45.2
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.8e-71 273.9 352 45.7
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.4e-71 273.5 396 47.2
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 3.1e-71 273.1 349 48.1
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 1.5e-70 270.8 362 44.8
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.0e-70 270.4 343 47.2
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 5.8e-70 268.9 351 44.4
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 7.6e-70 268.5 362 44.2
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 1.0e-69 268.1 397 43.3
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 4.9e-69 265.8 399 42.6
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 7.1e-68 261.9 387 48.3
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 7.1e-68 261.9 346 46.2
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 2.7e-67 260.0 393 43.8
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 4.6e-67 259.2 341 44.3
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 7.9e-67 258.5 345 45.5
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 3.0e-66 256.5 392 43.1
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 5.1e-66 255.8 390 44.6
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.5e-65 254.2 340 42.9
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 1.5e-65 254.2 385 46.5
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 1.5e-65 254.2 385 46.5
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 1.9e-65 253.8 340 43.2
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 3.3e-65 253.1 343 45.5
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 9.7e-65 251.5 390 43.3
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.6e-64 250.8 337 46.6
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.6e-64 250.8 340 42.6
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.8e-63 247.3 394 41.9
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 5.3e-63 245.7 345 46.1
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 9.0e-63 245.0 342 44.2
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.2e-62 244.6 346 42.2
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 4.5e-62 242.7 339 44.5
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 7.6e-62 241.9 395 40.8
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 7.6e-62 241.9 401 40.6
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 2.9e-61 240.0 391 42.5
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 3.8e-61 239.6 341 44.6
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 6.5e-61 238.8 343 42.3
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.1e-60 238.0 344 44.8
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.4e-60 237.7 341 44.6
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 2.5e-60 236.9 400 41.5
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 3.2e-60 236.5 344 41.6
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 4.2e-60 236.1 354 42.7
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 9.3e-60 235.0 339 45.4
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.6e-59 234.2 342 44.4
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 2.1e-59 233.8 337 43.9
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 2.1e-59 233.8 337 43.9
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 2.1e-59 233.8 341 45.2
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 4.6e-59 232.6 339 40.7
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 7.9e-59 231.9 341 44.3
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 2.3e-58 230.3 343 44.9
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 3.0e-58 229.9 339 43.1
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 8.8e-58 228.4 339 40.1
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.5e-57 227.6 360 42.8
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 4.3e-57 226.1 349 43.3
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 9.7e-57 224.9 345 44.3
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 1.7e-56 224.2 339 43.7
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 1.7e-56 224.2 389 41.9
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 4.8e-56 222.6 338 43.2
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 8.2e-56 221.9 338 43.2
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 8.2e-56 221.9 363 41.6
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.4e-55 220.3 340 40.0
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 3.1e-55 219.9 348 40.2
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 5.3e-55 219.2 430 39.3
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 1.5e-54 217.6 349 42.1
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.0e-54 217.2 332 43.1
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 1.3e-53 214.5 431 37.1
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 1.9e-52 210.7 277 46.6
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 9.4e-52 208.4 337 40.1
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 2.1e-51 207.2 380 39.7
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 4.7e-51 206.1 383 37.6
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 7.9e-51 205.3 356 39.3
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 1.5e-49 201.1 350 39.1
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 2.2e-48 197.2 389 36.8
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 4.8e-48 196.1 334 38.9
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 4.1e-47 193.0 390 35.1
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 5.3e-47 192.6 326 40.8
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 6.9e-47 192.2 375 38.1
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 7.7e-46 188.7 337 37.7
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 1.3e-45 188.0 337 38.6
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 6.5e-45 185.7 342 38.0
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 6.5e-45 185.7 359 35.7
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 3.2e-44 183.3 395 36.2
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 3.2e-44 183.3 395 36.2
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 7.2e-44 182.2 270 44.1
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 7.2e-44 182.2 343 35.9
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 3.6e-43 179.9 337 37.1
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 4.7e-43 179.5 301 40.9
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 4.7e-43 179.5 457 35.7
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 8.0e-43 178.7 336 36.6
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 2.3e-42 177.2 351 37.9
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 3.9e-42 176.4 402 35.6
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 6.7e-42 175.6 164 59.1
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 3.3e-41 173.3 298 42.3
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 2.2e-40 170.6 348 35.1
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 8.2e-40 168.7 347 36.6
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.8e-39 167.5 301 40.2
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 3.5e-38 163.3 265 43.8
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 1.7e-37 161.0 399 35.1
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 3.0e-34 150.2 259 39.4
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 1.2e-33 148.3 262 40.5
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.8e-32 143.7 273 37.4
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.8e-32 143.7 273 37.4
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.8e-32 143.7 273 37.4
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.6e-30 137.9 279 36.6
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.6e-30 137.9 279 36.6
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 6.5e-29 132.5 301 35.9
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 4.2e-28 129.8 379 33.5
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 1.8e-15 87.8 138 43.5
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 2.4e-15 87.4 222 31.5
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 3.1e-15 87.0 72 61.1
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 7.0e-15 85.9 44 81.8
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.5e-12 78.2 89 47.2
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 4.0e-10 70.1 347 26.5
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 1.7e-08 64.7 290 23.8
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 8.3e-08 62.4 374 25.9
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 2.0e-06 57.8 276 25.4
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.0e-06 57.8 60 53.3


User provided reference genes

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