Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12203 Beta vulgaris HOM05D001445 ORTHO05D001261 9.3e-33 142.9 70 100.0
EL10Ac5g12204 Beta vulgaris HOM05D001445 ORTHO05D001261 9.4e-25 116.3 64 90.6
AUR62007212 Chenopodium quinoa HOM05D001445 ORTHO05D001261 2.3e-15 85.1 50 78.0
Ah.07g199410 Amaranthus hybridus HOM05D001445 ORTHO05D001261 5.3e-12 73.9 55 61.8
Actinidia25936 Actinidia chinensis HOM05D001445 ORTHO05D001261 2.0e-11 72.0 52 61.5
Sc22g0001310 Simmondsia chinensis HOM05D001445 ORTHO05D001261 4.5e-11 70.9 50 64.0
QL12p007390 Quercus lobata HOM05D001445 ORTHO05D001261 5.9e-11 70.5 51 64.7
Actinidia03399 Actinidia chinensis HOM05D001445 ORTHO05D001261 7.7e-11 70.1 51 64.7
Potri.003G086600 Populus trichocarpa HOM05D001445 ORTHO05D001261 1.7e-10 68.9 51 60.8
Cpa.g.sc29.3 Carica papaya HOM05D001445 ORTHO05D001261 2.9e-10 68.2 55 65.5
Duzib084G0732 Durio zibethinus HOM05D001445 ORTHO05D001261 2.9e-10 68.2 59 61.0
Duzib205G1605 Durio zibethinus HOM05D001445 ORTHO05D001261 6.5e-10 67.0 59 59.3
TWI81G0239 Tripterygium wilfordii HOM05D001445 ORTHO05D001261 6.5e-10 67.0 59 62.7
PGSC0003DMG400001844 Solanum tuberosum HOM05D001445 ORTHO05D001261 8.5e-10 66.6 51 58.8
COL.COLO4_17128 Corchorus olitorius HOM05D001445 ORTHO05D001261 1.1e-09 66.2 60 55.0
Ciclev10032808m.g Citrus clementina HOM05D001445 ORTHO05D001261 1.5e-09 65.9 51 62.7
Rhsim11G0009400 Rhododendron simsii HOM05D001445 ORTHO05D001261 1.5e-09 65.9 50 62.0
Thecc.03G235400 Theobroma cacao HOM05D001445 ORTHO05D001261 1.5e-09 65.9 59 59.3
CSS0012427 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 1.9e-09 65.5 58 53.4
CAN.G572.46 Capsicum annuum HOM05D001445 ORTHO05D001261 1.9e-09 65.5 59 52.5
Dinv28905 Davidia involucrata HOM05D001445 ORTHO05D001261 1.9e-09 65.5 51 64.7
Gorai.006G215400 Gossypium raimondii HOM05D001445 ORTHO05D001261 2.5e-09 65.1 59 59.3
Gohir.D09G192500 Gossypium hirsutum HOM05D001445 ORTHO05D001261 3.2e-09 64.7 59 57.6
Lj4g0000385 Lotus japonicus HOM05D001445 ORTHO05D001261 4.2e-09 64.3 52 63.5
vmacro00361 Vaccinium macrocarpon HOM05D001445 ORTHO05D001261 4.2e-09 64.3 59 55.9
CSS0012481 Camellia sinensis var. sinensis HOM05D001445 ORTHO05D001261 5.5e-09 63.9 63 52.4
CiPaw.11G087100 Carya illinoinensis HOM05D001445 ORTHO05D001261 5.5e-09 63.9 51 64.7
Sabra03G0056300 Salix brachista HOM05D001445 ORTHO05D001261 5.5e-09 63.9 51 60.8
RcHm_v2.0_Chr7g0208011 Rosa chinensis HOM05D001445 ORTHO05D001261 7.2e-09 63.5 51 62.7
Gohir.A09G197900 Gossypium hirsutum HOM05D001445 ORTHO05D001261 9.4e-09 63.2 59 55.9
Hma1.2p1_0311F.1_g121170 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 1.2e-08 62.8 58 55.2
Atru.chr6.1791 Acer truncatum HOM05D001445 ORTHO05D001261 1.6e-08 62.4 51 58.8
Dinv25174 Davidia involucrata HOM05D001445 ORTHO05D001261 2.7e-08 61.6 51 58.8
Glyma.05G068800 Glycine max HOM05D001445 ORTHO05D001261 4.7e-08 60.8 52 57.7
Peaxi162Scf00084g00062 Petunia axillaris HOM05D001445 ORTHO05D001261 6.1e-08 60.5 51 58.8
FvH4_5g20950 Fragaria vesca HOM05D001445 ORTHO05D001261 1.0e-07 59.7 50 60.0
Glyma.17G151500 Glycine max HOM05D001445 ORTHO05D001261 1.0e-07 59.7 52 55.8
MD06G1041900 Malus domestica HOM05D001445 ORTHO05D001261 1.8e-07 58.9 51 58.8
Lj2P248T28 Lonicera japonica HOM05D001445 ORTHO05D001261 2.3e-07 58.5 43 65.1
Prupe.5G048600 Prunus persica HOM05D001445 ORTHO05D001261 2.3e-07 58.5 59 52.5
Ca_22038_v3 Cicer arietinum L. HOM05D001445 ORTHO05D001261 3.0e-07 58.2 52 57.7
Cc08_g01760 Coffea canephora HOM05D001445 ORTHO05D001261 8.8e-07 56.6 50 54.0
Hma1.2p1_0311F.1_g121180 Hydrangea macrophylla HOM05D001445 ORTHO05D001261 8.8e-07 56.6 50 54.0
Phvul.003G227700 Phaseolus vulgaris HOM05D001445 ORTHO05D001261 2.0e-06 55.5 52 53.8
Psat0s116g0280 Pisum sativum HOM05D000064 ORTHO05D001353 2.0e-06 55.5 50 58.0
VMungo0251G3442 Vigna mungo HOM05D001445 ORTHO05D001261 7.5e-06 53.5 52 50.0


User provided reference genes

Program Settings