Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 1.3e-68 263.8 246 100.0
Ah.07g200600 Amaranthus hybridus HOM05D006310 ORTHO05D007768 4.0e-38 162.5 156 69.9
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 2.1e-18 97.1 160 50.0
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 4.8e-15 85.9 194 46.4
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 2.4e-14 83.6 193 36.8
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 7.6e-13 78.6 174 36.8
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 9.9e-13 78.2 199 43.7
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 1.3e-12 77.8 183 35.5
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 2.2e-12 77.0 173 39.3
Medtr5g029910 Medicago truncatula HOM05D006310 ORTHO05D007768 8.4e-12 75.1 175 34.9
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 3.2e-11 73.2 184 33.7
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 3.2e-11 73.2 203 36.0
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 3.2e-11 73.2 196 29.6
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 5.5e-11 72.4 202 32.7
Psat2g137200 Pisum sativum HOM05D006310 ORTHO05D007768 9.3e-11 71.6 171 35.1
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 1.2e-10 71.2 162 32.1
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 1.2e-10 71.2 195 43.1
AUR62007306 Chenopodium quinoa HOM05D031544 ORTHO05D001847 1.6e-10 70.9 74 63.5
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 2.1e-10 70.5 194 34.0
AUR62018697 Chenopodium quinoa HOM05D006310 ORTHO05D007768 2.7e-10 70.1 32 100.0
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 2.7e-10 70.1 176 32.4
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 3.5e-10 69.7 193 33.2
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 4.6e-10 69.3 199 31.2
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 7.9e-10 68.6 195 28.7
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 7.9e-10 68.6 166 33.7
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 1.0e-09 68.2 183 35.0
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.3e-09 67.8 202 35.1
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 1.3e-09 67.8 37 81.1
MELO3C003424.2 Cucumis melo HOM05D006310 ORTHO05D007768 1.8e-09 67.4 168 36.3
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 3.0e-09 66.6 43 72.1
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 3.0e-09 66.6 41 73.2
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 3.0e-09 66.6 195 28.2
Ca_25198_v3 Cicer arietinum L. HOM05D006310 ORTHO05D007768 3.9e-09 66.2 175 32.6
Glyma.09G205800 Glycine max HOM05D006310 ORTHO05D007768 3.9e-09 66.2 176 31.2
Actinidia09184 Actinidia chinensis HOM05D006310 ORTHO05D007768 5.1e-09 65.9 180 31.1
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 6.7e-09 65.5 176 33.0
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 6.7e-09 65.5 176 33.0
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 6.7e-09 65.5 186 35.5
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 6.7e-09 65.5 197 32.5
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 6.7e-09 65.5 184 35.3
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 6.7e-09 65.5 41 70.7
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 6.7e-09 65.5 175 32.6
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 8.7e-09 65.1 168 38.1
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 8.7e-09 65.1 178 34.8
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 8.7e-09 65.1 204 29.4
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 8.7e-09 65.1 42 69.0
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 8.7e-09 65.1 171 33.3
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 8.7e-09 65.1 171 33.9
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 8.7e-09 65.1 42 71.4
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 8.7e-09 65.1 42 69.0
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 1.1e-08 64.7 184 32.6
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 1.1e-08 64.7 108 37.0
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 1.5e-08 64.3 169 33.7
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 1.5e-08 64.3 207 38.2
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 1.9e-08 63.9 207 33.3
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 1.9e-08 63.9 207 33.3
A01p09980 Brassica napus HOM05D006310 ORTHO05D007768 2.5e-08 63.5 164 37.8
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 2.5e-08 63.5 193 30.1
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 4.3e-08 62.8 194 37.6
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 4.3e-08 62.8 202 30.2
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 5.6e-08 62.4 233 30.0
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 7.4e-08 62.0 191 36.6
FAN08G3522 Fragaria x ananassa HOM05D006310 ORTHO05D007768 7.4e-08 62.0 171 33.3
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 7.4e-08 62.0 206 32.5
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 7.4e-08 62.0 177 31.6
BcaC09g51583 Brassica carinata HOM05D006310 ORTHO05D007768 9.6e-08 61.6 164 42.7
C01p11780 Brassica napus HOM05D006310 ORTHO05D007768 9.6e-08 61.6 164 42.1
BolC1t01140H Brassica oleracea HOM05D006310 ORTHO05D007768 9.6e-08 61.6 164 44.5
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 9.6e-08 61.6 43 65.1
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 9.6e-08 61.6 183 39.9
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 9.6e-08 61.6 182 31.3
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 1.3e-07 61.2 42 59.5
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 1.3e-07 61.2 216 28.7
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 1.6e-07 60.8 188 34.0
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 1.6e-07 60.8 186 38.2
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 1.6e-07 60.8 203 36.5
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 1.6e-07 60.8 199 29.1
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 1.6e-07 60.8 216 31.0
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.6e-07 60.8 40 67.5
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.6e-07 60.8 203 31.0
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 1.6e-07 60.8 39 71.8
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 1.6e-07 60.8 41 65.9
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 2.1e-07 60.5 185 36.8
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 2.1e-07 60.5 191 36.1
BraA01t00942Z Brassica rapa HOM05D006310 ORTHO05D007768 2.1e-07 60.5 168 45.2
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.1e-07 60.5 35 71.4
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 2.1e-07 60.5 196 32.1
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 2.1e-07 60.5 41 65.9
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 2.8e-07 60.1 35 68.6
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 2.8e-07 60.1 203 31.0
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 4.8e-07 59.3 35 74.3
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 4.8e-07 59.3 192 40.1
FAN04G1670 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.8e-07 59.3 171 32.7
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 4.8e-07 59.3 187 32.6
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 6.2e-07 58.9 191 39.3
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 6.2e-07 58.9 222 28.4
Phvul.002G140000 Phaseolus vulgaris HOM05D006310 ORTHO05D007768 6.2e-07 58.9 41 63.4
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 6.2e-07 58.9 39 69.2
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 6.2e-07 58.9 39 69.2
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 8.1e-07 58.5 190 35.8
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 8.1e-07 58.5 42 64.3
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 1.4e-06 57.8 176 36.9
Eucgr.E00268 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.4e-06 57.8 41 63.4
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 1.4e-06 57.8 37 73.0
Eucgr.E00267 Eucalyptus grandis HOM05D006310 ORTHO05D007768 1.8e-06 57.4 42 61.9
SEGI_00832 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 1.8e-06 57.4 35 68.6
SGA_v2.0_scaffold20G09266 Striga asiatica HOM05D006310 ORTHO05D007768 1.8e-06 57.4 171 32.2
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 2.4e-06 57.0 34 73.5
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 3.1e-06 56.6 193 31.1
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 5.3e-06 55.8 42 57.1
SEGI_05061 Sequoiadendron giganteum HOM05D006310 ORTHO05D007768 6.9e-06 55.5 35 62.9
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 9.0e-06 55.1 157 29.3
Migut.E00791 Erythranthe guttata HOM05D006310 ORTHO05D007768 9.0e-06 55.1 185 42.2


User provided reference genes

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