Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 9.8e-40 166.4 87 100.0
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 1.1e-25 119.8 87 75.9
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 1.8e-25 119.0 81 79.0
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 6.8e-25 117.1 88 73.9
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 1.2e-21 106.3 76 75.0
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 2.7e-21 105.1 75 70.7
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 2.3e-20 102.1 88 63.6
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 2.3e-20 102.1 84 64.3
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 3.0e-20 101.7 87 65.5
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 6.6e-20 100.5 75 66.7
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 1.5e-19 99.4 84 65.5
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 1.9e-19 99.0 75 66.7
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 1.6e-18 95.9 78 66.7
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 2.1e-18 95.5 84 63.1
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 2.1e-18 95.5 75 65.3
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 2.1e-18 95.5 86 61.6
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 2.8e-18 95.1 79 67.1
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 3.6e-18 94.7 77 63.6
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 4.7e-18 94.4 73 71.2
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 6.2e-18 94.0 77 62.3
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 6.2e-18 94.0 73 65.8
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 6.2e-18 94.0 74 70.3
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 1.1e-17 93.2 66 72.7
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 1.8e-17 92.4 72 65.3
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 2.4e-17 92.0 79 60.8
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 2.4e-17 92.0 78 61.5
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 5.2e-17 90.9 77 62.3
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 5.2e-17 90.9 78 62.8
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 6.8e-17 90.5 72 65.3
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 8.9e-17 90.1 89 61.8
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 1.2e-16 89.7 77 59.7
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 1.2e-16 89.7 77 61.0
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 2.0e-16 89.0 83 62.7
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 4.4e-16 87.8 72 69.4
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 9.9e-16 86.7 74 59.5
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 9.9e-16 86.7 74 58.1
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 1.3e-15 86.3 74 59.5
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.7e-15 85.9 74 62.2
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 2.9e-15 85.1 71 64.8
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 8.4e-15 83.6 60 68.3
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 8.4e-15 83.6 60 68.3
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 8.4e-15 83.6 73 61.6
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.1e-14 83.2 77 59.7
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 1.1e-14 83.2 67 65.7
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 1.4e-14 82.8 73 63.0
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.9e-14 82.4 73 63.0
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 5.4e-14 80.9 70 58.6
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 9.2e-14 80.1 78 60.3
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 1.2e-13 79.7 72 61.1
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 1.2e-13 79.7 73 61.6
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 1.3e-12 76.3 84 53.6
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 2.3e-12 75.5 83 59.0
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 2.3e-12 75.5 84 56.0
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 3.9e-12 74.7 78 59.0
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 5.1e-12 74.3 79 59.5
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 1.1e-11 73.2 75 61.3
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 2.5e-11 72.0 75 60.0
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 2.5e-11 72.0 70 58.6
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 3.3e-11 71.6 75 60.0
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 3.3e-11 71.6 80 55.0
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 9.6e-11 70.1 78 55.1
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 9.6e-11 70.1 78 55.1
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 9.6e-11 70.1 45 75.6
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 3.6e-10 68.2 84 54.8
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 4.8e-10 67.8 78 53.8
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 4.8e-10 67.8 62 58.1
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 4.8e-10 67.8 46 65.2
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 8.1e-10 67.0 72 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 4.0e-09 64.7 61 55.7
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 6.9e-09 63.9 64 56.2
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 8.4e-07 57.0 44 63.6


User provided reference genes

Program Settings