Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11937 Beta vulgaris HOM05D004500 ORTHO05D005775 3.9e-117 424.9 220 100.0
EL10Ac4g10085 Beta vulgaris HOM05D004500 ORTHO05D005775 6.2e-91 337.8 209 86.6
AUR62000221 Chenopodium quinoa HOM05D004500 ORTHO05D005775 3.8e-72 275.4 210 71.4
AUR62006566 Chenopodium quinoa HOM05D004500 ORTHO05D005775 2.1e-70 269.6 209 70.3
Hund07422 Selenicereus undatus HOM05D004500 ORTHO05D005775 3.9e-61 238.8 203 62.6
Gohir.D09G105200 Gossypium hirsutum HOM05D004500 ORTHO05D005775 2.1e-54 216.5 206 55.8
Gorai.006G122400 Gossypium raimondii HOM05D004500 ORTHO05D005775 2.1e-54 216.5 206 55.8
Cfa009915 Carpinus fangiana HOM05D004500 ORTHO05D005775 3.6e-54 215.7 198 58.1
Sc09g0001130 Simmondsia chinensis HOM05D004500 ORTHO05D005775 3.9e-53 212.2 198 57.6
Duzib168G0672 Durio zibethinus HOM05D004500 ORTHO05D005775 5.2e-53 211.8 198 56.1
QL01p016442 Quercus lobata HOM05D004500 ORTHO05D005775 5.2e-53 211.8 198 55.6
Rhsim13G0205000 Rhododendron simsii HOM05D004500 ORTHO05D005775 8.8e-53 211.1 201 56.7
GSVIVG01037358001 Vitis vinifera HOM05D004500 ORTHO05D005775 8.8e-53 211.1 192 57.8
Oeu061692.5 Olea europaea HOM05D004500 ORTHO05D005775 1.5e-52 210.3 202 55.0
COL.COLO4_06618 Corchorus olitorius HOM05D004500 ORTHO05D005775 5.7e-52 208.4 206 53.4
Hma1.2p1_0460F.1_g157660 Hydrangea macrophylla HOM05D004500 ORTHO05D005775 7.4e-52 208.0 207 55.6
Migut.D00681 Erythranthe guttata HOM05D004500 ORTHO05D005775 9.7e-52 207.6 205 53.2
Dinv22199 Davidia involucrata HOM05D004500 ORTHO05D005775 1.7e-51 206.8 197 56.3
RcHm_v2.0_Chr5g0051931 Rosa chinensis HOM05D004500 ORTHO05D005775 2.8e-51 206.1 191 53.4
Actinidia06989 Actinidia chinensis HOM05D004500 ORTHO05D005775 4.8e-51 205.3 209 56.9
TWI75G0701 Tripterygium wilfordii HOM05D004500 ORTHO05D005775 4.8e-51 205.3 196 54.6
Nitab4.5_0002026g0160 Nicotiana tabacum HOM05D004500 ORTHO05D005775 8.2e-51 204.5 209 53.1
arahy.Tifrunner.gnm1.ann1.VEQ9JC Arachis hypogaea HOM05D004500 ORTHO05D005775 1.1e-50 204.1 199 54.3
CiPaw.13G147900 Carya illinoinensis HOM05D004500 ORTHO05D005775 1.1e-50 204.1 197 55.8
CANSAT54G2073 Cannabis sativa HOM05D004500 ORTHO05D005775 1.4e-50 203.8 206 53.9
Lsat_1_v5_gn_5_70881 Lactuca sativa HOM05D004500 ORTHO05D005775 1.4e-50 203.8 204 54.9
Peaxi162Scf00029g02523 Petunia axillaris HOM05D004500 ORTHO05D005775 1.8e-50 203.4 201 53.7
Aqoxy1G00409 Aquilegia oxysepala HOM05D004500 ORTHO05D005775 3.1e-50 202.6 195 54.9
ECA233G3879 Erigeron canadensis HOM05D004500 ORTHO05D005775 4.1e-50 202.2 185 55.7
MBI19_g07497_MAGBIO Magnolia biondii HOM05D004500 ORTHO05D005775 5.3e-50 201.8 211 53.6
Sopen11g024300 Solanum pennellii HOM05D004500 ORTHO05D005775 5.3e-50 201.8 209 53.1
TPR.G16395 Trifolium pratense HOM05D004500 ORTHO05D005775 5.3e-50 201.8 196 56.1
Potri.001G274500 Populus trichocarpa HOM05D004500 ORTHO05D005775 7.0e-50 201.4 209 53.1
Ciclev10014018m.g Citrus clementina HOM05D004500 ORTHO05D005775 9.1e-50 201.1 190 53.2
Manes.02G138300 Manihot esculenta HOM05D004500 ORTHO05D005775 9.1e-50 201.1 190 54.7
SGA_v2.0_scaffold29G12209 Striga asiatica HOM05D004500 ORTHO05D005775 9.1e-50 201.1 207 51.7
MD03G1157000 Malus domestica HOM05D004500 ORTHO05D005775 1.2e-49 200.7 194 53.1
TAR623G1318 Trochodendron aralioides HOM05D004500 ORTHO05D005775 1.2e-49 200.7 191 55.0
arahy.Tifrunner.gnm1.ann1.G3VBDM Arachis hypogaea HOM05D004500 ORTHO05D005775 1.6e-49 200.3 190 54.7
Eucgr.J00673 Eucalyptus grandis HOM05D004500 ORTHO05D005775 1.6e-49 200.3 201 52.7
SalBow6G2693 Salvia bowleyana HOM05D004500 ORTHO05D005775 2.6e-49 199.5 209 50.7
CAN.G1050.5 Capsicum annuum HOM05D004500 ORTHO05D005775 3.5e-49 199.1 209 53.6
Medtr5g089000 Medicago truncatula HOM05D004500 ORTHO05D005775 3.5e-49 199.1 196 55.1
Nn7g36895 Nelumbo nucifera HOM05D004500 ORTHO05D005775 3.5e-49 199.1 185 54.6
Nitab4.5_0000492g0190 Nicotiana tabacum HOM05D004500 ORTHO05D005775 4.5e-49 198.7 209 52.2
Solyc11g062320.2 Solanum lycopersicum HOM05D004500 ORTHO05D005775 5.9e-49 198.4 207 52.7
MSTRG.21337 Avicennia marina HOM05D004500 ORTHO05D005775 1.3e-48 197.2 209 50.2
Glyma.14G036800 Glycine max HOM05D004500 ORTHO05D005775 1.3e-48 197.2 197 54.3
Psat0s2305g0080 Pisum sativum HOM05D004500 ORTHO05D005775 1.7e-48 196.8 197 53.8
HanXRQChr12g0380331 Helianthus annuus HOM05D004500 ORTHO05D005775 2.2e-48 196.4 197 53.8
Carub.0004s0721 Capsella rubella HOM05D004500 ORTHO05D005775 3.8e-48 195.7 204 52.0
Thhalv10011180m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 5.0e-48 195.3 202 51.0
FAN21G1747 Fragaria x ananassa HOM05D004500 ORTHO05D005775 5.0e-48 195.3 191 52.9
Phvul.008G203200 Phaseolus vulgaris HOM05D004500 ORTHO05D005775 8.5e-48 194.5 205 52.2
AT2G26780 Arabidopsis thaliana HOM05D004500 ORTHO05D005775 1.1e-47 194.1 201 50.7
FvH4_3g28920 Fragaria vesca HOM05D004500 ORTHO05D005775 1.1e-47 194.1 191 52.9
FAN11G1622 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.1e-47 194.1 191 52.9
Prupe.4G270300 Prunus persica HOM05D004500 ORTHO05D005775 1.1e-47 194.1 209 51.2
THA.LOC104800461 Tarenaya hassleriana HOM05D004500 ORTHO05D005775 1.1e-47 194.1 199 51.3
VMungo0647G1179 Vigna mungo HOM05D004500 ORTHO05D005775 1.1e-47 194.1 200 52.0
Ca_06188_v3 Cicer arietinum L. HOM05D004500 ORTHO05D005775 1.5e-47 193.7 196 52.6
Lalb_Chr10g0106121 Lupinus albus HOM05D004500 ORTHO05D005775 1.5e-47 193.7 202 52.5
RcHm_v2.0_Chr5g0051871 Rosa chinensis HOM05D004500 ORTHO05D005775 1.5e-47 193.7 209 50.2
FAN21G2043 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.9e-47 193.4 192 52.1
A08p01100 Brassica napus HOM05D004500 ORTHO05D005775 4.2e-47 192.2 192 52.1
CARHR118960 Cardamine hirsuta HOM05D004500 ORTHO05D005775 4.2e-47 192.2 205 51.2
AL4G19970 Arabidopsis lyrata HOM05D004500 ORTHO05D005775 5.5e-47 191.8 209 49.3
BraA08t32166Z Brassica rapa HOM05D004500 ORTHO05D005775 5.5e-47 191.8 192 51.6
LjContig00564g0025272 Lotus japonicus HOM05D004500 ORTHO05D005775 9.4e-47 191.0 195 52.8
Sp1g40640 Schrenkiella parvula HOM05D004500 ORTHO05D005775 9.4e-47 191.0 198 49.5
FAN25G3650 Fragaria x ananassa HOM05D004500 ORTHO05D005775 1.2e-46 190.7 191 52.4
MELO3C014542.2 Cucumis melo HOM05D004500 ORTHO05D005775 4.7e-46 188.7 191 51.3
ClCG02G022670 Citrullus lanatus HOM05D004500 ORTHO05D005775 1.0e-45 187.6 204 50.5
CsaV3_6G038790 Cucumis sativus L. HOM05D004500 ORTHO05D005775 1.0e-45 187.6 191 50.8
BcaB04g17016 Brassica carinata HOM05D004500 ORTHO05D005775 1.4e-45 187.2 198 52.0
CSS0026558 Camellia sinensis var. sinensis HOM05D004500 ORTHO05D005775 1.4e-45 187.2 198 54.0
Sabra16G0169000 Salix brachista HOM05D004500 ORTHO05D005775 1.4e-45 187.2 213 50.7
C03p92100 Brassica napus HOM05D004500 ORTHO05D005775 5.2e-45 185.3 191 50.3
BolC3t21527H Brassica oleracea HOM05D004500 ORTHO05D005775 5.2e-45 185.3 191 50.3
Sed0001243 Sechium edule HOM05D004500 ORTHO05D005775 8.8e-45 184.5 187 51.9
Atru.chr3.2856 Acer truncatum HOM05D004500 ORTHO05D005775 1.5e-44 183.7 196 49.0
Haze_23272 Corylus avellana HOM05D004500 ORTHO05D005775 3.3e-44 182.6 196 52.6
Atru.chr3.2854 Acer truncatum HOM05D004500 ORTHO05D005775 5.7e-44 181.8 196 48.0
Aa31LG5G9010 Aethionema arabicum HOM05D004500 ORTHO05D005775 1.3e-43 180.6 208 48.1
CDE02G1339 Ceratophyllum demersum HOM05D004500 ORTHO05D005775 3.7e-43 179.1 191 52.4
Zm00001eb196280 Zea mays HOM05D004500 ORTHO05D005775 5.3e-42 175.3 200 47.5
Cc01_g06520 Coffea canephora HOM05D004500 ORTHO05D005775 5.9e-41 171.8 230 44.8
Os11g0137300 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 1.7e-40 170.2 201 47.8
ATR0307G114 Amborella trichopoda HOM05D004500 ORTHO05D005775 2.3e-37 159.8 183 45.9
SEGI_37322 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 2.2e-35 153.3 188 43.6
vmacro04083 Vaccinium macrocarpon HOM05D004500 ORTHO05D005775 1.9e-31 140.2 152 52.0
unitig_578.g16660 Utricularia gibba HOM05D004500 ORTHO05D005775 1.2e-30 137.5 187 41.2
BcaC01g01445 Brassica carinata HOM05D004500 ORTHO05D005775 1.0e-29 134.4 149 49.7
AagrBONN_evm.TU.Sc2ySwM_117.694 Anthoceros agrestis HOM05D004500 ORTHO05D005775 2.4e-26 123.2 185 38.4
SMO228G0054 Selaginella moellendorffii HOM05D004500 ORTHO05D005775 2.4e-26 123.2 190 40.5
PSO339G2400 Papaver somniferum HOM05D004500 ORTHO05D005775 1.0e-24 117.9 127 54.3
Pp3c1_28010 Physcomitrium patens HOM05D004500 ORTHO05D005775 1.3e-24 117.5 192 35.4
Os12g0148400 Oryza sativa ssp. japonica HOM05D004500 ORTHO05D005775 8.6e-24 114.8 212 36.3
EL10Ac5g12062 Beta vulgaris HOM05D004500 ORTHO05D005775 1.2e-22 110.9 60 93.3
Mapoly0009s0155 Marchantia polymorpha HOM05D004500 ORTHO05D005775 1.6e-22 110.5 181 38.1
CBR_g37490 Chara braunii HOM05D004500 ORTHO05D005775 2.6e-20 103.2 204 33.8
PRCOL_00001646 Prasinoderma coloniale HOM05D004500 ORTHO05D005775 1.0e-16 91.3 181 33.1
Cre04.g217935 Chlamydomonas reinhardtii HOM05D004500 ORTHO05D005775 5.0e-16 89.0 138 41.3
SEGI_00784 Sequoiadendron giganteum HOM05D004500 ORTHO05D005775 1.9e-15 87.0 84 48.8
EL10Ac7g17277 Beta vulgaris HOM05D044539 ORTHO05D027017 4.3e-15 85.9 64 73.4
Thhalv10012226m.g Eutrema salsugineum HOM05D004500 ORTHO05D005775 4.3e-15 85.9 163 38.7
EL10Ac3g06052 Beta vulgaris HOM05D002442 ORTHO05D005775 2.8e-14 83.2 44 90.9
Gohir.A09G108566 Gossypium hirsutum HOM05D004500 ORTHO05D005775 3.6e-14 82.8 63 61.9
HPP92_022829 Vanilla planifolia HOM05D004500 ORTHO05D005775 6.2e-14 82.0 81 50.6
MCO04G062 Micromonas commoda HOM05D004500 ORTHO05D005775 4.4e-12 75.9 196 29.6
Lj1C1068G17 Lonicera japonica HOM05D004500 ORTHO05D009839 2.4e-10 70.1 44 68.2
HPP92_022828 Vanilla planifolia HOM05D004500 ORTHO05D005775 2.1e-06 57.0 95 44.2


User provided reference genes

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