Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11812 Beta vulgaris HOM05D000107 ORTHO05D000062 7.8e-64 246.9 119 100.0
AUR62029024 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.0e-23 112.1 74 70.3
AUR62040855 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.9e-23 111.7 65 78.5
AUR62041527 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.5e-22 109.0 69 72.5
AUR62018241 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-21 106.7 68 73.5
AUR62042100 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-18 96.3 58 75.9
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.8e-15 84.0 66 57.6
ECA248G0231 Erigeron canadensis HOM05D000107 ORTHO05D000062 8.8e-15 84.0 66 57.6
AUR62038390 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-14 83.6 66 54.5
AUR62038387 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-14 82.8 66 53.0
AUR62005778 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.3e-14 81.6 65 61.5
Psat5g250640 Pisum sativum HOM05D008859 ORTHO05D007166 4.3e-14 81.6 71 49.3
Sopen01g007080 Solanum pennellii HOM05D007930 ORTHO05D000062 4.3e-14 81.6 82 46.3
AUR62028444 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.7e-14 81.3 66 54.5
AUR62032945 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.7e-14 81.3 66 53.0
AUR62034026 Chenopodium quinoa HOM05D000107 ORTHO05D000062 5.7e-14 81.3 66 53.0
AUR62024349 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.4e-14 80.9 65 58.5
AUR62036640 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.4e-14 80.9 65 58.5
AUR62042513 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.4e-14 80.9 65 58.5
AUR62043742 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.4e-14 80.9 65 58.5
ECA232G1845 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.4e-14 80.9 66 56.1
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 7.4e-14 80.9 64 56.2
AUR62029908 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-13 80.1 62 54.8
AUR62036835 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-13 80.1 66 53.0
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-13 80.1 64 56.2
Sopen09g018620 Solanum pennellii HOM05D000107 ORTHO05D009932 1.3e-13 80.1 64 56.2
PGSC0003DMG400042791 Solanum tuberosum HOM05D000107 ORTHO05D012342 1.3e-13 80.1 64 56.2
AUR62014956 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.7e-13 79.7 65 58.5
Sopen12g014820 Solanum pennellii HOM05D000107 ORTHO05D000062 2.2e-13 79.3 58 60.3
AUR62018146 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.8e-13 79.0 66 51.5
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 3.7e-13 78.6 64 54.7
AUR62015626 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-13 78.2 66 51.5
AUR62040733 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.8e-13 78.2 66 51.5
Hund11086 Selenicereus undatus HOM05D009682 ORTHO05D000385 4.8e-13 78.2 65 53.8
Sopen01g006480 Solanum pennellii HOM05D000107 ORTHO05D000062 4.8e-13 78.2 58 58.6
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 4.8e-13 78.2 64 54.7
Sopen04g019100 Solanum pennellii HOM05D007930 ORTHO05D007166 6.3e-13 77.8 64 53.1
SGA_v2.0_scaffold251G45053 Striga asiatica HOM05D000107 ORTHO05D000062 6.3e-13 77.8 65 53.8
Lj2g0003377 Lotus japonicus HOM05D000107 ORTHO05D000062 8.2e-13 77.4 68 52.9
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 8.2e-13 77.4 68 52.9
Sopen02g004240 Solanum pennellii HOM05D000107 ORTHO05D000062 8.2e-13 77.4 58 58.6
Sopen11g021510 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-13 77.4 64 53.1
AUR62040356 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.1e-12 77.0 65 56.9
Sopen01g007990 Solanum pennellii HOM05D000107 ORTHO05D012342 1.1e-12 77.0 64 54.7
AUR62038913 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.4e-12 76.6 66 50.0
Sopen08g007430 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-12 76.6 64 54.7
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.4e-12 76.6 64 53.1
Sopen08g019930 Solanum pennellii HOM05D000107 ORTHO05D000062 1.8e-12 76.3 58 58.6
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 2.4e-12 75.9 64 54.7
Sopen03g027010 Solanum pennellii HOM05D000107 ORTHO05D014265 3.1e-12 75.5 58 58.6
Psat5g015840 Pisum sativum HOM05D008859 ORTHO05D007166 6.9e-12 74.3 58 55.2
Ca_13698_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 1.2e-11 73.6 59 54.2
Sopen10g012680 Solanum pennellii HOM05D000107 ORTHO05D012342 1.2e-11 73.6 64 48.4
Ah.04g158600 Amaranthus hybridus HOM05D000107 ORTHO05D000062 2.0e-11 72.8 67 49.3
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 2.0e-11 72.8 64 50.0
Sopen06g014270 Solanum pennellii HOM05D000107 ORTHO05D014265 2.6e-11 72.4 58 56.9
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 2.6e-11 72.4 55 54.5
SGA_v2.0_scaffold28G12020 Striga asiatica HOM05D000107 ORTHO05D000062 5.9e-11 71.2 56 55.4
Ah.13g065570 Amaranthus hybridus HOM05D000107 ORTHO05D000062 7.7e-11 70.9 67 47.8
Psat3g029000 Pisum sativum HOM05D000107 ORTHO05D000062 1.0e-10 70.5 73 49.3
Psat2g072600 Pisum sativum HOM05D000107 ORTHO05D000062 1.3e-10 70.1 73 50.7
AUR62041732 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.7e-10 69.7 53 52.8
Psat3g187240 Pisum sativum HOM05D000107 ORTHO05D000062 1.7e-10 69.7 73 49.3
Sopen06g007740 Solanum pennellii HOM05D000107 ORTHO05D000062 1.7e-10 69.7 64 48.4
SGA_v2.0_scaffold623G53233 Striga asiatica HOM05D000107 ORTHO05D000062 2.2e-10 69.3 56 51.8
SGA_v2.0_scaffold11G05530 Striga asiatica HOM05D000107 ORTHO05D000062 2.9e-10 68.9 56 53.6
TPR.G25563 Trifolium pratense HOM05D000107 ORTHO05D000062 2.9e-10 68.9 63 47.6
TPR.G35654 Trifolium pratense HOM05D000107 ORTHO05D000062 2.9e-10 68.9 65 52.3
SGA_v2.0_scaffold279G46790 Striga asiatica HOM05D000107 ORTHO05D000062 5.0e-10 68.2 56 51.8
Psat5g082920 Pisum sativum HOM05D008859 ORTHO05D000385 6.5e-10 67.8 65 44.6
AUR62042815 Chenopodium quinoa HOM05D000107 ORTHO05D016691 8.5e-10 67.4 43 72.1
CAN.G268.5 Capsicum annuum HOM05D034184 ORTHO05D012342 2.5e-09 65.9 70 44.3
AUR62030809 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.6e-08 63.2 43 65.1
Sopen06g013740 Solanum pennellii HOM05D000004 ORTHO05D012342 1.6e-08 63.2 57 49.1
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.6e-08 63.2 80 42.5
AUR62004862 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.1e-08 62.8 43 67.4
Sopen10g023130 Solanum pennellii HOM05D000107 ORTHO05D000062 2.7e-08 62.4 60 48.3
AUR62019517 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.6e-08 62.0 38 73.7
AUR62022417 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.7e-08 61.6 41 65.9
AUR62031350 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.7e-08 61.6 41 68.3
Sopen07g016840 Solanum pennellii HOM05D000107 ORTHO05D000062 6.1e-08 61.2 59 50.8
AUR62041034 Chenopodium quinoa HOM05D000107 ORTHO05D000385 1.4e-07 60.1 55 52.7
TWI31G1320 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.4e-07 60.1 56 48.2
Sopen10g011990 Solanum pennellii HOM05D000107 ORTHO05D000062 2.3e-07 59.3 48 54.2
Sopen12g015800 Solanum pennellii HOM05D000107 ORTHO05D012342 3.9e-07 58.5 54 48.1
Sopen11g018950 Solanum pennellii HOM05D000107 ORTHO05D000062 6.7e-07 57.8 49 53.1
TAR266G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.1e-06 57.0 62 41.9
PSO566G0060 Papaver somniferum HOM05D000107 ORTHO05D000062 1.5e-06 56.6 64 45.3
Rhsim01G0072500 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-06 56.6 73 39.7
RcHm_v2.0_Chr4g0436001 Rosa chinensis HOM05D000107 ORTHO05D000062 1.5e-06 56.6 62 40.3
AUR62040758 Chenopodium quinoa HOM05D006468 ORTHO05D006908 2.0e-06 56.2 64 43.8
AUR62033022 Chenopodium quinoa HOM05D000107 ORTHO05D000062 3.3e-06 55.5 71 42.3
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 3.3e-06 55.5 71 39.4
Sopen07g006310 Solanum pennellii HOM05D000107 ORTHO05D014265 3.3e-06 55.5 103 33.0
TAR634G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.3e-06 55.5 56 46.4
AUR62040123 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.4e-06 55.1 55 41.8
TAR344G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 4.4e-06 55.1 58 37.9
FvH4_3g32802 Fragaria vesca HOM05D000107 ORTHO05D000062 5.7e-06 54.7 54 44.4
Psat3g052720 Pisum sativum HOM05D009811 ORTHO05D007166 7.4e-06 54.3 73 45.2
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 9.7e-06 53.9 59 44.1
AUR62042259 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.7e-06 53.9 56 44.6
TAR165G0003 Trochodendron aralioides HOM05D000107 ORTHO05D000062 9.7e-06 53.9 80 38.8


User provided reference genes

Program Settings