Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 1.9e-47 192.2 98 100.0
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 2.5e-44 181.8 98 95.9
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 7.4e-44 180.3 98 94.9
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 3.7e-43 177.9 98 93.9
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 5.0e-40 167.5 97 88.7
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.7e-38 161.8 97 84.5
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.0e-37 158.3 97 82.5
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 1.1e-36 156.4 96 81.2
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 1.1e-36 156.4 96 82.3
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 4.3e-36 154.5 94 81.9
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 8.2e-35 150.2 96 76.0
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 5.3e-34 147.5 97 74.2
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.5e-33 146.0 96 71.9
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 1.5e-33 146.0 96 72.9
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 5.9e-33 144.1 97 73.2
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 5.9e-33 144.1 98 73.5
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 5.9e-33 144.1 95 72.6
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.0e-32 143.3 96 71.9
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 1.3e-32 142.9 96 70.8
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.3e-32 142.9 96 70.8
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.3e-32 142.9 98 71.4
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 1.7e-32 142.5 96 70.8
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 3.8e-32 141.4 95 72.6
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 5.0e-32 141.0 96 72.9
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 5.0e-32 141.0 96 70.8
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 6.5e-32 140.6 96 71.9
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 8.5e-32 140.2 95 72.6
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 8.5e-32 140.2 96 69.8
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 1.1e-31 139.8 97 73.2
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 1.1e-31 139.8 98 70.4
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.4e-31 139.4 97 69.1
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.9e-31 139.0 96 68.8
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.9e-31 139.0 96 69.8
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 1.9e-31 139.0 96 70.8
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 1.9e-31 139.0 96 70.8
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 2.5e-31 138.7 95 70.5
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 2.5e-31 138.7 98 68.4
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 3.2e-31 138.3 95 69.5
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 3.2e-31 138.3 96 69.8
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 4.2e-31 137.9 95 71.6
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.5e-31 137.5 96 67.7
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 5.5e-31 137.5 95 73.7
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 9.4e-31 136.7 97 69.1
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.6e-30 136.0 95 68.4
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 1.6e-30 136.0 95 68.4
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 1.6e-30 136.0 95 71.6
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 2.1e-30 135.6 95 71.6
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 2.7e-30 135.2 96 70.8
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 3.6e-30 134.8 97 71.1
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 4.7e-30 134.4 96 69.8
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 4.7e-30 134.4 101 67.3
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 6.1e-30 134.0 93 68.8
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 7.9e-30 133.7 95 68.4
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 1.0e-29 133.3 98 68.4
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 1.0e-29 133.3 97 68.0
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 1.8e-29 132.5 95 66.3
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 2.3e-29 132.1 96 64.6
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 2.3e-29 132.1 95 66.3
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 3.0e-29 131.7 95 66.3
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 3.9e-29 131.3 97 67.0
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 5.1e-29 131.0 97 68.0
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 5.1e-29 131.0 95 67.4
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 6.7e-29 130.6 100 65.0
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 8.8e-29 130.2 96 68.8
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 8.8e-29 130.2 97 69.1
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 8.8e-29 130.2 95 68.4
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.1e-28 129.8 95 66.3
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.1e-28 129.8 97 64.9
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 1.1e-28 129.8 93 68.8
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.5e-28 129.4 99 66.7
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 1.5e-28 129.4 97 68.0
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.5e-28 129.4 99 65.7
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 2.0e-28 129.0 92 68.5
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 2.0e-28 129.0 99 65.7
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 2.6e-28 128.6 96 68.8
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 2.6e-28 128.6 98 66.3
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 7.4e-28 127.1 95 67.4
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 9.7e-28 126.7 95 66.3
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 9.7e-28 126.7 101 62.4
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.3e-27 126.3 121 54.5
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.7e-27 125.9 95 64.2
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.7e-27 125.9 100 62.0
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.7e-27 125.9 97 68.0
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.7e-27 125.9 97 68.0
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 2.2e-27 125.6 101 62.4
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 2.2e-27 125.6 95 66.3
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 2.8e-27 125.2 95 67.4
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 3.7e-27 124.8 99 63.6
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 3.7e-27 124.8 113 57.5
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.8e-27 124.4 97 67.0
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 4.8e-27 124.4 97 67.0
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 6.3e-27 124.0 97 64.9
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 6.3e-27 124.0 97 64.9
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 8.2e-27 123.6 95 67.4
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 8.2e-27 123.6 95 68.4
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 8.2e-27 123.6 95 68.4
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 8.2e-27 123.6 95 67.4
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 8.2e-27 123.6 95 66.3
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 8.2e-27 123.6 97 66.0
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 1.1e-26 123.2 95 68.4
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 1.8e-26 122.5 95 66.3
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 1.8e-26 122.5 97 64.9
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 1.8e-26 122.5 98 61.2
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 3.1e-26 121.7 95 67.4
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 5.3e-26 120.9 97 66.0
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 7.0e-26 120.6 97 63.9
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 9.1e-26 120.2 95 65.3
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 9.1e-26 120.2 95 65.3
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 9.1e-26 120.2 95 65.3
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 1.2e-25 119.8 95 64.2
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.5e-25 119.4 95 64.2
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 7.7e-25 117.1 96 62.5
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 2.9e-24 115.2 95 63.2
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 8.5e-24 113.6 98 59.2
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 8.0e-22 107.1 97 60.8
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.4e-21 106.3 96 55.2
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 2.3e-21 105.5 99 55.6
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 2.0e-20 102.4 74 68.9
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 1.8e-18 95.9 95 51.6
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 9.1e-18 93.6 85 56.5
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 1.6e-17 92.8 96 54.2
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 4.5e-17 91.3 97 52.6
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.0e-16 90.1 95 49.5
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.9e-15 85.9 95 45.3
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 1.2e-14 83.2 94 42.6
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 8.0e-14 80.5 61 62.3
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 3.4e-12 75.1 72 54.2
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 6.3e-11 70.9 95 36.8
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 9.1e-10 67.0 59 54.2
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 7.7e-09 63.9 59 49.2
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 7.7e-09 63.9 61 52.5
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 5.0e-08 61.2 59 52.5
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 5.0e-08 61.2 61 52.5
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 7.2e-07 57.4 97 42.3
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 1.6e-06 56.2 65 44.6


User provided reference genes

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