Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11614 Beta vulgaris HOM05D007528 ORTHO05D008503 1.6e-157 559.3 268 100.0
Dinv14550 Davidia involucrata HOM05D007528 ORTHO05D008503 6.5e-66 255.0 207 61.4
QL11p009983 Quercus lobata HOM05D007528 ORTHO05D008503 5.5e-65 251.9 224 58.5
Manes.09G073900 Manihot esculenta HOM05D007528 ORTHO05D008503 9.3e-65 251.1 204 62.3
Cpa.g.sc33.188 Carica papaya HOM05D007528 ORTHO05D008503 3.5e-64 249.2 230 57.8
HanXRQChr04g0125621 Helianthus annuus HOM05D007528 ORTHO05D008503 4.6e-64 248.8 258 51.2
GSVIVG01025860001 Vitis vinifera HOM05D007528 ORTHO05D008503 5.1e-63 245.4 216 57.9
AL4G39090 Arabidopsis lyrata HOM05D007528 ORTHO05D008503 1.9e-62 243.4 207 56.5
Nn7g37298 Nelumbo nucifera HOM05D007528 ORTHO05D008503 5.7e-62 241.9 198 60.1
SalBow6G5282 Salvia bowleyana HOM05D007528 ORTHO05D008503 5.7e-62 241.9 252 50.4
THA.LOC104803254 Tarenaya hassleriana HOM05D007528 ORTHO05D008503 1.3e-61 240.7 196 59.7
Thecc.05G128400 Theobroma cacao HOM05D007528 ORTHO05D008503 1.3e-61 240.7 190 60.5
A04p31360 Brassica napus HOM05D007528 ORTHO05D008503 1.6e-61 240.4 249 50.6
CSS0027135 Camellia sinensis var. sinensis HOM05D007528 ORTHO05D008503 1.6e-61 240.4 197 62.4
BraA04t18594Z Brassica rapa HOM05D007528 ORTHO05D008503 4.8e-61 238.8 207 57.0
SalBow6G5858 Salvia bowleyana HOM05D007528 ORTHO05D008503 4.8e-61 238.8 212 55.7
TWI63G0885 Tripterygium wilfordii HOM05D007528 ORTHO05D008503 4.8e-61 238.8 217 55.8
Duzib093G0275 Durio zibethinus HOM05D007528 ORTHO05D008503 6.3e-61 238.4 207 56.0
TAR623G0014 Trochodendron aralioides HOM05D007528 ORTHO05D008503 6.3e-61 238.4 254 52.0
Thhalv10017145m.g Eutrema salsugineum HOM05D007528 ORTHO05D008503 8.2e-61 238.0 195 57.4
Gorai.002G231000 Gossypium raimondii HOM05D007528 ORTHO05D008503 8.2e-61 238.0 194 59.8
Atru.chr8.936 Acer truncatum HOM05D007528 ORTHO05D008503 1.1e-60 237.7 208 55.3
ECA236G1579 Erigeron canadensis HOM05D007528 ORTHO05D008503 1.4e-60 237.3 191 61.3
Gohir.D01G187600 Gossypium hirsutum HOM05D007528 ORTHO05D008503 1.4e-60 237.3 194 59.3
vmacro12911 Vaccinium macrocarpon HOM05D007528 ORTHO05D008503 1.4e-60 237.3 257 50.6
AT2G41120 Arabidopsis thaliana HOM05D007528 ORTHO05D008503 2.4e-60 236.5 206 55.8
MBI13_g02396_MAGBIO Magnolia biondii HOM05D007528 ORTHO05D008503 2.4e-60 236.5 179 64.2
CANSAT21G0864 Cannabis sativa HOM05D007528 ORTHO05D008503 5.3e-60 235.3 204 58.8
C04p68770 Brassica napus HOM05D007528 ORTHO05D008503 6.9e-60 235.0 207 55.6
BolC4t28382H Brassica oleracea HOM05D007528 ORTHO05D008503 6.9e-60 235.0 207 55.6
Carub.0004s2343 Capsella rubella HOM05D007528 ORTHO05D008503 6.9e-60 235.0 205 56.1
Oeu032951.1 Olea europaea HOM05D007528 ORTHO05D008503 6.9e-60 235.0 179 61.5
Potri.006G025200 Populus trichocarpa HOM05D007528 ORTHO05D008503 6.9e-60 235.0 187 60.4
Ciclev10012580m.g Citrus clementina HOM05D007528 ORTHO05D008503 9.0e-60 234.6 206 56.3
DCAR_013508 Daucus carota HOM05D007528 ORTHO05D008503 1.2e-59 234.2 195 62.6
Eucgr.A02169 Eucalyptus grandis HOM05D007528 ORTHO05D008503 1.2e-59 234.2 200 58.5
MD12G1013500 Malus domestica HOM05D007528 ORTHO05D008503 1.2e-59 234.2 180 63.3
Sp4g23430 Schrenkiella parvula HOM05D007528 ORTHO05D008503 1.2e-59 234.2 252 50.4
PGR042G1749 Punica granatum HOM05D007528 ORTHO05D008503 1.5e-59 233.8 205 57.6
RcHm_v2.0_Chr3g0495771 Rosa chinensis HOM05D007528 ORTHO05D008503 2.6e-59 233.0 204 55.9
Gohir.A01G197400 Gossypium hirsutum HOM05D007528 ORTHO05D008503 3.4e-59 232.6 194 58.8
arahy.Tifrunner.gnm1.ann1.ARK2IX Arachis hypogaea HOM05D007528 ORTHO05D008503 4.5e-59 232.3 193 59.6
MSTRG.19743 Avicennia marina HOM05D007528 ORTHO05D008503 5.9e-59 231.9 211 56.4
Lsat_1_v5_gn_8_83941 Lactuca sativa HOM05D007528 ORTHO05D008503 5.9e-59 231.9 178 61.8
arahy.Tifrunner.gnm1.ann1.ZMQ31P Arachis hypogaea HOM05D007528 ORTHO05D008503 7.7e-59 231.5 179 62.6
Nitab4.5_0000382g0060 Nicotiana tabacum HOM05D007528 ORTHO05D008503 7.7e-59 231.5 238 52.1
COL.COLO4_08087 Corchorus olitorius HOM05D007528 ORTHO05D008503 1.0e-58 231.1 194 55.7
Migut.J01598 Erythranthe guttata HOM05D007528 ORTHO05D008503 1.0e-58 231.1 183 59.0
Lj2A414T28 Lonicera japonica HOM05D007528 ORTHO05D008503 1.0e-58 231.1 204 57.4
Sabra06G0018500 Salix brachista HOM05D007528 ORTHO05D008503 1.0e-58 231.1 247 49.8
Cc06_g21080 Coffea canephora HOM05D007528 ORTHO05D008503 1.3e-58 230.7 203 57.6
Haze_09241 Corylus avellana HOM05D007528 ORTHO05D006305 2.2e-58 229.9 217 53.9
Lj1g0006388 Lotus japonicus HOM05D007528 ORTHO05D008503 2.9e-58 229.6 258 49.2
FvH4_1g29750 Fragaria vesca HOM05D007528 ORTHO05D008503 8.5e-58 228.0 204 55.9
Lalb_Chr22g0358311 Lupinus albus HOM05D007528 ORTHO05D008503 8.5e-58 228.0 255 49.4
ClCG10G016790 Citrullus lanatus HOM05D007528 ORTHO05D008503 1.4e-57 227.3 235 50.6
FAN28G2175 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.9e-57 226.9 205 55.6
PGSC0003DMG400019757 Solanum tuberosum HOM05D007528 ORTHO05D008503 2.5e-57 226.5 196 56.1
FAN26G0883 Fragaria x ananassa HOM05D007528 ORTHO05D008503 3.2e-57 226.1 204 55.9
PSO729G0248 Papaver somniferum HOM05D007528 ORTHO05D008503 9.4e-57 224.6 222 53.6
Peaxi162Scf00183g00712 Petunia axillaris HOM05D007528 ORTHO05D008503 9.4e-57 224.6 204 55.4
Ca_08340_v3 Cicer arietinum L. HOM05D007528 ORTHO05D008503 1.6e-56 223.8 179 60.3
Aa31LG3G960 Aethionema arabicum HOM05D007528 ORTHO05D008503 2.1e-56 223.4 207 52.2
CDE04G0261 Ceratophyllum demersum HOM05D007528 ORTHO05D008503 2.1e-56 223.4 182 57.7
CsaV3_3G039560 Cucumis sativus L. HOM05D007528 ORTHO05D008503 2.1e-56 223.4 233 48.1
Phvul.001G109000 Phaseolus vulgaris HOM05D007528 ORTHO05D008503 2.7e-56 223.0 184 58.7
ATR0307G122 Amborella trichopoda HOM05D007528 ORTHO05D008503 6.1e-56 221.9 193 57.5
TPR.G23704 Trifolium pratense HOM05D007528 ORTHO05D008503 7.9e-56 221.5 179 59.8
BcaNung05626 Brassica carinata HOM05D007528 ORTHO05D008503 1.0e-55 221.1 260 48.1
Medtr7g088210 Medicago truncatula HOM05D007528 ORTHO05D008503 1.0e-55 221.1 180 60.6
Glyma.19G123400 Glycine max HOM05D007528 ORTHO05D008503 3.0e-55 219.5 179 57.5
Solyc03g044630.2 Solanum lycopersicum HOM05D007528 ORTHO05D008503 3.0e-55 219.5 196 54.1
Psat3g082960 Pisum sativum HOM05D007528 ORTHO05D008503 2.5e-54 216.5 208 55.8
Aqoxy2G00067 Aquilegia oxysepala HOM05D007528 ORTHO05D008503 9.7e-54 214.5 196 54.6
SEGI_20851 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 3.1e-52 209.5 198 54.5
Sed0015046 Sechium edule HOM05D007528 ORTHO05D008503 9.1e-52 208.0 210 51.0
CARHR136210 Cardamine hirsuta HOM05D007528 ORTHO05D008503 1.0e-50 204.5 248 46.0
Prupe.7G017900 Prunus persica HOM05D007528 ORTHO05D008503 1.9e-49 200.3 139 66.9
Mapoly0168s0009 Marchantia polymorpha HOM05D007528 ORTHO05D008503 3.2e-49 199.5 181 53.0
Os11g0130200 Oryza sativa ssp. japonica HOM05D007528 ORTHO05D008503 3.9e-47 192.6 209 47.8
Pp3c21_6860 Physcomitrium patens HOM05D007528 ORTHO05D008503 6.7e-47 191.8 249 44.2
Zm00001eb195960 Zea mays HOM05D007528 ORTHO05D008503 6.7e-47 191.8 191 51.3
SMO266G0100 Selaginella moellendorffii HOM05D007528 ORTHO05D008503 1.1e-46 191.0 175 51.4
AagrBONN_evm.TU.Sc2ySwM_344.4238 Anthoceros agrestis HOM05D007528 ORTHO05D008503 1.3e-42 177.6 244 39.8
Rhsim10G0151800 Rhododendron simsii HOM05D007528 ORTHO05D008503 2.1e-40 170.2 119 67.2
CiPaw.13G169300 Carya illinoinensis HOM05D007528 ORTHO05D008503 4.7e-40 169.1 129 60.5
CBR_g37627 Chara braunii HOM05D007528 ORTHO05D008503 3.9e-39 166.0 231 41.1
FAN19G0638 Fragaria x ananassa HOM05D007528 ORTHO05D008503 1.7e-34 150.6 128 57.0
BcaC02g12850 Brassica carinata HOM05D007528 ORTHO05D008503 1.8e-31 140.6 164 45.7
CAN.G1129.33 Capsicum annuum HOM05D007528 ORTHO05D008503 2.0e-30 137.1 123 54.5
Sopen03g008910 Solanum pennellii HOM05D007528 ORTHO05D008503 8.3e-29 131.7 123 52.8
Glyma.03G119100 Glycine max HOM05D007528 ORTHO05D008503 2.6e-22 110.2 123 45.5
unitig_21.g20663 Utricularia gibba HOM05D007528 ORTHO05D008503 7.0e-20 102.1 180 37.2
VMungo1383G2363 Vigna mungo HOM05D007528 ORTHO05D008503 7.5e-14 82.0 51 70.6
Glyma.03G119000 Glycine max HOM05D007528 ORTHO05D008503 1.4e-12 77.8 126 40.5
SEGI_18622 Sequoiadendron giganteum HOM05D007528 ORTHO05D008503 1.4e-12 77.8 74 52.7
FAN23G1305 Fragaria x ananassa HOM05D007528 ORTHO05D029410 1.9e-09 67.4 99 40.4
Hma1.2p1_1327F.1_g275910 Hydrangea macrophylla HOM05D007528 ORTHO05D008503 2.1e-08 63.9 71 50.7
Cfa011867 Carpinus fangiana HOM05D007528 ORTHO05D008503 3.1e-07 60.1 67 44.8
Pp3s30_790 Physcomitrium patens HOM05D002374 ORTHO05D003594 5.8e-06 55.8 92 35.9


User provided reference genes

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