Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11418 Beta vulgaris HOM05D007169 ORTHO05D007243 2.8e-88 328.6 163 100.0
AUR62029615 Chenopodium quinoa HOM05D007169 ORTHO05D007243 2.6e-62 242.3 163 74.8
Ah.02g111120 Amaranthus hybridus HOM05D007169 ORTHO05D007243 2.6e-54 215.7 158 69.0
GSVIVG01008542001 Vitis vinifera HOM05D003858 ORTHO05D005878 1.1e-47 193.7 149 63.8
Cpa.g.sc13.118 Carica papaya HOM05D007169 ORTHO05D007243 2.2e-45 186.0 152 63.8
Duzib068G0521 Durio zibethinus HOM05D007169 ORTHO05D007243 3.6e-43 178.7 145 63.4
Prupe.5G151300 Prunus persica HOM05D007169 ORTHO05D007243 6.1e-43 177.9 156 60.9
Thecc.03G128900 Theobroma cacao HOM05D007169 ORTHO05D007243 1.8e-42 176.4 135 66.7
Gohir.A09G246900 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.2e-41 173.7 135 65.9
Gohir.D09G247400 Gossypium hirsutum HOM05D007169 ORTHO05D007243 1.2e-41 173.7 135 65.9
Gorai.006G271900 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.2e-41 173.7 135 65.9
CiPaw.12G042700 Carya illinoinensis HOM05D007169 ORTHO05D007243 1.5e-41 173.3 156 55.8
Eucgr.K02727 Eucalyptus grandis HOM05D007169 ORTHO05D007243 1.5e-41 173.3 141 61.7
PGR044G0546 Punica granatum HOM05D007169 ORTHO05D007243 1.5e-41 173.3 147 55.8
Manes.01G190300 Manihot esculenta HOM05D007169 ORTHO05D007243 2.6e-41 172.6 147 60.5
RhsimUnG0231000 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.4e-41 172.2 142 60.6
Sabra15G0116800 Salix brachista HOM05D007169 ORTHO05D007243 4.4e-41 171.8 154 57.8
Actinidia18344 Actinidia chinensis HOM05D007169 ORTHO05D007243 7.5e-41 171.0 150 60.0
arahy.Tifrunner.gnm1.ann1.NVZ1RT Arachis hypogaea HOM05D007169 ORTHO05D007243 7.5e-41 171.0 153 59.5
arahy.Tifrunner.gnm1.ann1.ZT3MCZ Arachis hypogaea HOM05D007169 ORTHO05D007243 7.5e-41 171.0 153 59.5
Ciclev10018838m.g Citrus clementina HOM05D003858 ORTHO05D005878 7.5e-41 171.0 156 60.3
Atru.chr9.1127 Acer truncatum HOM05D007169 ORTHO05D007243 1.3e-40 170.2 149 59.1
CSS0048648 Camellia sinensis var. sinensis HOM05D007169 ORTHO05D007243 1.3e-40 170.2 138 65.2
Phvul.009G166500 Phaseolus vulgaris HOM05D007169 ORTHO05D007243 1.3e-40 170.2 134 63.4
Potri.012G097500 Populus trichocarpa HOM05D007169 ORTHO05D007243 1.3e-40 170.2 147 62.6
Aa31LG3G6930 Aethionema arabicum HOM05D007169 ORTHO05D007243 1.7e-40 169.9 136 61.8
AL8G24630 Arabidopsis lyrata HOM05D007169 ORTHO05D007243 2.8e-40 169.1 136 60.3
Sc04g0000670 Simmondsia chinensis HOM05D007169 ORTHO05D007243 2.8e-40 169.1 159 56.0
TWI23G0849 Tripterygium wilfordii HOM05D007169 ORTHO05D007243 3.7e-40 168.7 148 60.1
Potri.015G096000 Populus trichocarpa HOM05D007169 ORTHO05D007243 6.3e-40 167.9 154 59.7
AT5G50410 Arabidopsis thaliana HOM05D007169 ORTHO05D007243 8.3e-40 167.5 136 59.6
Thhalv10014456m.g Eutrema salsugineum HOM05D007169 ORTHO05D007243 8.3e-40 167.5 136 59.6
MELO3C002358.2 Cucumis melo HOM05D007169 ORTHO05D007243 1.1e-39 167.2 153 60.8
ClCG03G003730 Citrullus lanatus HOM05D007169 ORTHO05D007243 1.4e-39 166.8 134 65.7
Carub.0008s1052 Capsella rubella HOM05D007169 ORTHO05D007243 1.8e-39 166.4 136 58.8
CsaV3_1G009620 Cucumis sativus L. HOM05D007169 ORTHO05D007243 3.1e-39 165.6 143 62.2
FAN18G0310 Fragaria x ananassa HOM05D007169 ORTHO05D007243 4.1e-39 165.2 142 61.3
Psat5g051240 Pisum sativum HOM05D007169 ORTHO05D007243 4.1e-39 165.2 146 60.3
BolC2t08225H Brassica oleracea HOM05D007169 ORTHO05D007243 5.3e-39 164.9 142 57.0
FvH4_5g08300 Fragaria vesca HOM05D007169 ORTHO05D007243 5.3e-39 164.9 134 63.4
Lsat_1_v5_gn_1_28980 Lactuca sativa HOM05D007169 ORTHO05D007243 5.3e-39 164.9 157 53.5
QL10p002966 Quercus lobata HOM05D007169 ORTHO05D007243 5.3e-39 164.9 155 56.8
FAN04G2393 Fragaria x ananassa HOM05D007169 ORTHO05D007243 7.0e-39 164.5 156 57.1
BcaC03g14651 Brassica carinata HOM05D007169 ORTHO05D007243 1.2e-38 163.7 142 56.3
A02p12790 Brassica napus HOM05D007169 ORTHO05D007243 1.2e-38 163.7 143 55.9
C02p20850 Brassica napus HOM05D007169 ORTHO05D007243 1.2e-38 163.7 142 56.3
BraA02t06336Z Brassica rapa HOM05D007169 ORTHO05D007243 1.2e-38 163.7 143 55.9
Ca_16044_v3 Cicer arietinum L. HOM05D007169 ORTHO05D007243 1.6e-38 163.3 144 60.4
THA.LOC104803148 Tarenaya hassleriana HOM05D007169 ORTHO05D007243 2.0e-38 162.9 151 57.6
Glyma.06G170200 Glycine max HOM05D007169 ORTHO05D007243 2.7e-38 162.5 150 56.0
Lj1g0026378 Lotus japonicus HOM05D007169 ORTHO05D007243 3.5e-38 162.2 144 59.0
CANSAT80G1416 Cannabis sativa HOM05D007169 ORTHO05D007243 4.5e-38 161.8 167 56.3
Peaxi162Scf00089g01624 Petunia axillaris HOM05D007169 ORTHO05D007243 4.5e-38 161.8 140 59.3
Sp6g12560 Schrenkiella parvula HOM05D007169 ORTHO05D007243 4.5e-38 161.8 151 54.3
SpUn0015_0080 Schrenkiella parvula HOM05D007169 ORTHO05D007243 4.5e-38 161.8 151 54.3
SpUn0039_0020 Schrenkiella parvula HOM05D007169 ORTHO05D007243 4.5e-38 161.8 151 54.3
TPR.G14220 Trifolium pratense HOM05D007169 ORTHO05D007243 4.5e-38 161.8 146 58.9
BcaB05g24052 Brassica carinata HOM05D007169 ORTHO05D007243 5.9e-38 161.4 149 56.4
CAN.G338.2 Capsicum annuum HOM05D007169 ORTHO05D007243 7.7e-38 161.0 140 58.6
ECA247G3219 Erigeron canadensis HOM05D007169 ORTHO05D007243 1.7e-37 159.8 139 55.4
HanXRQChr02g0034741 Helianthus annuus HOM05D007169 ORTHO05D007243 1.7e-37 159.8 155 56.1
RcHm_v2.0_Chr7g0190221 Rosa chinensis HOM05D007169 ORTHO05D007243 2.9e-37 159.1 144 58.3
Solyc03g112570.2 Solanum lycopersicum HOM05D007169 ORTHO05D007243 2.9e-37 159.1 140 56.4
PGSC0003DMG400018172 Solanum tuberosum HOM05D007169 ORTHO05D007243 3.8e-37 158.7 140 55.7
Sopen03g031630 Solanum pennellii HOM05D007169 ORTHO05D007243 6.5e-37 157.9 140 55.7
Medtr3g099350 Medicago truncatula HOM05D007169 ORTHO05D007243 5.5e-36 154.8 149 57.0
Oeu006492.1 Olea europaea HOM05D007169 ORTHO05D007243 7.2e-36 154.5 132 59.8
Cc06_g22780 Coffea canephora HOM05D007169 ORTHO05D007243 9.4e-36 154.1 138 58.0
Hma1.2p1_0014F.1_g009470 Hydrangea macrophylla HOM05D007169 ORTHO05D007243 9.4e-36 154.1 130 63.8
Sed0023866 Sechium edule HOM05D007169 ORTHO05D007243 1.2e-35 153.7 153 53.6
TAR374G1569 Trochodendron aralioides HOM05D007169 ORTHO05D007243 1.2e-35 153.7 173 47.4
SalBow5G3517 Salvia bowleyana HOM05D007169 ORTHO05D007243 1.6e-35 153.3 132 58.3
MSTRG.11390 Avicennia marina HOM05D007169 ORTHO05D007243 2.1e-35 152.9 132 59.1
SalBow5G4624 Salvia bowleyana HOM05D007169 ORTHO05D007243 2.7e-35 152.5 132 58.3
Migut.I00155 Erythranthe guttata HOM05D007169 ORTHO05D007243 6.1e-35 151.4 140 57.1
Lalb_Chr08g0237141 Lupinus albus HOM05D007169 ORTHO05D007243 1.0e-34 150.6 133 57.9
Nn3g16473 Nelumbo nucifera HOM05D007169 ORTHO05D007243 1.0e-34 150.6 144 50.7
Gorai.004G276100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.4e-34 150.2 128 60.2
MD14G1157400 Malus domestica HOM05D007169 ORTHO05D007243 5.2e-34 148.3 189 45.0
SGA_v2.0_scaffold56G20032 Striga asiatica HOM05D007169 ORTHO05D007243 6.8e-34 147.9 135 60.0
Sed0005692 Sechium edule HOM05D007169 ORTHO05D007243 4.4e-33 145.2 154 53.9
TAR371G0734 Trochodendron aralioides HOM05D007169 ORTHO05D007243 5.7e-33 144.8 145 52.4
MD06G1142100 Malus domestica HOM05D007169 ORTHO05D007243 1.3e-32 143.7 191 46.1
TAR622G0369 Trochodendron aralioides HOM05D007169 ORTHO05D007243 3.5e-30 135.6 177 42.4
Nitab4.5_0011992g0030 Nicotiana tabacum HOM05D007169 ORTHO05D007243 7.7e-30 134.4 148 52.7
unitig_0.g2530 Utricularia gibba HOM05D007169 ORTHO05D007243 1.0e-29 134.0 146 52.1
Gorai.008G206100 Gossypium raimondii HOM05D007169 ORTHO05D007243 1.3e-29 133.7 115 59.1
Cfa018798 Carpinus fangiana HOM05D007169 ORTHO05D007243 2.3e-29 132.9 116 56.9
Gohir.D12G191801 Gossypium hirsutum HOM05D007169 ORTHO05D007243 2.9e-29 132.5 115 59.1
Rhsim08G0190100 Rhododendron simsii HOM05D007169 ORTHO05D007243 3.8e-29 132.1 142 52.1
Haze_07134 Corylus avellana HOM05D007169 ORTHO05D007243 8.6e-29 131.0 116 56.0
CANSAT80G0844 Cannabis sativa HOM05D007169 ORTHO05D007243 1.1e-28 130.6 81 74.1
DCAR_021617 Daucus carota HOM05D007169 ORTHO05D007243 1.5e-28 130.2 140 49.3
VMungo1309G2045 Vigna mungo HOM05D007169 ORTHO05D007243 1.5e-28 130.2 83 72.3
Lalb_Chr23g0273701 Lupinus albus HOM05D007169 ORTHO05D007243 1.9e-28 129.8 136 50.7
Hund26053 Selenicereus undatus HOM05D007169 ORTHO05D007243 3.3e-28 129.0 102 60.8
Aqoxy3G00802 Aquilegia oxysepala HOM05D007169 ORTHO05D007243 5.5e-28 128.3 145 50.3
Dinv23144 Davidia involucrata HOM05D007169 ORTHO05D007243 9.5e-28 127.5 92 69.6
vmacro07808 Vaccinium macrocarpon HOM05D007169 ORTHO05D007243 2.8e-27 125.9 82 73.2
Medtr2g045120 Medicago truncatula HOM05D007169 ORTHO05D007243 4.7e-27 125.2 93 66.7
Medtr2g445400 Medicago truncatula HOM05D007169 ORTHO05D007243 4.7e-27 125.2 93 66.7
PSO478G3704 Papaver somniferum HOM05D007169 ORTHO05D007243 1.0e-26 124.0 188 39.4
Gohir.D08G258666 Gossypium hirsutum HOM05D007169 ORTHO05D007243 5.2e-26 121.7 70 77.1
PSO017G4677 Papaver somniferum HOM05D007169 ORTHO05D007243 6.8e-26 121.3 191 38.7
ATR0561G062 Amborella trichopoda HOM05D011398 ORTHO05D007243 1.2e-25 120.6 144 42.4
Lj5A96T48 Lonicera japonica HOM05D007169 ORTHO05D007243 7.5e-25 117.9 79 68.4
DCAR_016391 Daucus carota HOM05D007169 ORTHO05D007243 3.7e-24 115.5 91 59.3
HPP92_011766 Vanilla planifolia HOM05D007169 ORTHO05D007243 2.4e-23 112.8 146 45.2
Os08g0531200 Oryza sativa ssp. japonica HOM05D011398 ORTHO05D007243 4.1e-23 112.1 172 36.6
HPP92_011770 Vanilla planifolia HOM05D007169 ORTHO05D007243 7.8e-22 107.8 204 33.8
SEGI_24222 Sequoiadendron giganteum HOM05D007169 ORTHO05D007243 3.9e-21 105.5 69 58.0
CARHR257950 Cardamine hirsuta HOM05D007169 ORTHO05D007243 6.6e-21 104.8 135 42.2
Zm00001eb175120 Zea mays HOM05D011398 ORTHO05D007243 7.3e-20 101.3 114 43.9
FAN08G0105 Fragaria x ananassa HOM05D007169 ORTHO05D007243 1.5e-17 93.6 52 80.8
arahy.Tifrunner.gnm1.ann1.M1N3UH Arachis hypogaea HOM05D002218 ORTHO05D007243 1.9e-15 86.7 65 61.5
COL.COLO4_28120 Corchorus olitorius HOM05D007169 ORTHO05D007243 2.0e-14 83.2 133 42.9
Sabra12G0071300 Salix brachista HOM05D000677 ORTHO05D000727 7.8e-14 81.3 48 77.1
CBR_g46730 Chara braunii HOM05D011398 ORTHO05D007243 3.9e-13 79.0 77 50.6
Mapoly0022s0039 Marchantia polymorpha HOM05D011398 ORTHO05D007243 7.3e-12 74.7 72 43.1
CBR_g30247 Chara braunii HOM05D011398 ORTHO05D007243 2.8e-11 72.8 104 36.5
AagrBONN_evm.TU.Sc2ySwM_344.3697 Anthoceros agrestis HOM05D011398 ORTHO05D007243 2.4e-07 59.7 79 32.9
Pp3c9_18230 Physcomitrium patens HOM05D011398 ORTHO05D007243 4.1e-07 58.9 83 30.1


User provided reference genes

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