Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11283 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-39 165.6 78 100.0
EL10Ac8g19445 Beta vulgaris HOM05D000003 ORTHO05D000007 2.5e-18 95.1 90 51.1
EL10Ac5g11620 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-17 92.8 90 51.1
EL10Ac7g17199 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-17 92.8 88 52.3
EL10Ac8g19433 Beta vulgaris HOM05D000003 ORTHO05D000007 3.6e-17 91.3 90 51.1
EL10Ac7g17172 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-16 89.4 90 48.9
EL10Ac1g01948 Beta vulgaris HOM05D000003 ORTHO05D000006 2.3e-16 88.6 88 50.0
EL10Ac7g17463 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-15 86.3 90 51.1
EL10Ac9g22997 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-15 86.3 90 51.1
EL10Ac6g14081 Beta vulgaris HOM05D000003 ORTHO05D000007 1.5e-15 85.9 88 46.6
EL10Ac1g02205 Beta vulgaris HOM05D000003 ORTHO05D000007 5.7e-15 84.0 87 50.6
EL10Ac3g06546 Beta vulgaris HOM05D000003 ORTHO05D000007 5.7e-15 84.0 90 47.8
EL10Ac5g11715 Beta vulgaris HOM05D000003 ORTHO05D000007 9.8e-15 83.2 62 56.5
Nitab4.5_0003024g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.3e-14 82.8 73 52.1
EL10Ac6g14332 Beta vulgaris HOM05D000003 ORTHO05D000007 2.2e-14 82.0 85 47.1
EL10Ac6g14708 Beta vulgaris HOM05D000003 ORTHO05D000007 2.9e-14 81.6 62 56.5
EL10Ac1g01964 Beta vulgaris HOM05D000003 ORTHO05D000007 3.7e-14 81.3 60 56.7
EL10Ac4g07979 Beta vulgaris HOM05D000003 ORTHO05D000007 4.9e-14 80.9 87 48.3
EL10Ac6g13748 Beta vulgaris HOM05D000003 ORTHO05D000007 8.3e-14 80.1 90 47.8
EL10Ac7g17749 Beta vulgaris HOM05D000003 ORTHO05D000007 1.2e-12 76.3 55 58.2
EL10Ac4g09212 Beta vulgaris HOM05D000003 ORTHO05D000007 7.8e-12 73.6 86 37.2
EL10Ac1g01519 Beta vulgaris HOM05D000003 ORTHO05D000007 1.0e-11 73.2 79 46.8
Sopen07g022300 Solanum pennellii HOM05D000003 ORTHO05D000007 3.3e-10 68.2 85 36.5
EL10Ac2g03788 Beta vulgaris HOM05D000003 ORTHO05D000007 4.3e-10 67.8 70 47.1
CANSAT01G2288 Cannabis sativa HOM05D000003 ORTHO05D000006 4.3e-10 67.8 86 38.4
EL10Ac3g06400 Beta vulgaris HOM05D000003 ORTHO05D000007 7.3e-10 67.0 87 35.6
CANSAT01G0784 Cannabis sativa HOM05D000003 ORTHO05D000007 7.3e-10 67.0 86 36.0
Hund08810 Selenicereus undatus HOM05D000003 ORTHO05D000007 7.3e-10 67.0 84 36.9
CANSAT11G1056 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-09 66.2 86 36.0
CANSAT54G2456 Cannabis sativa HOM05D000003 ORTHO05D000007 1.2e-09 66.2 86 36.0
CANSAT25G3759 Cannabis sativa HOM05D000003 ORTHO05D000007 2.1e-09 65.5 86 36.0
EL10Ac1g01488 Beta vulgaris HOM05D000003 ORTHO05D000007 3.6e-09 64.7 57 50.9
CANSAT11G0988 Cannabis sativa HOM05D000003 ORTHO05D000007 3.6e-09 64.7 84 33.3
CANSAT78G1313 Cannabis sativa HOM05D000003 ORTHO05D000007 4.7e-09 64.3 84 39.3
CANSAT78G1658 Cannabis sativa HOM05D000003 ORTHO05D000007 4.7e-09 64.3 84 39.3
Nitab4.5_0002681g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.0e-09 63.5 88 30.7
Nitab4.5_0005861g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.0e-09 63.5 62 40.3
Nitab4.5_0009090g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.0e-09 63.5 82 31.7
EL10Ac6g14716 Beta vulgaris HOM05D000003 ORTHO05D000007 1.0e-08 63.2 45 60.0
Nitab4.5_0001519g0110 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.0e-08 63.2 85 30.6
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 1.4e-08 62.8 88 35.2
Hund10169 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-08 62.8 86 32.6
CANSAT56G3660 Cannabis sativa HOM05D000003 ORTHO05D000007 2.3e-08 62.0 90 31.1
CANSAT11G2162 Cannabis sativa HOM05D000003 ORTHO05D000007 4.0e-08 61.2 84 31.0
CANSAT21G0806 Cannabis sativa HOM05D000003 ORTHO05D000007 4.0e-08 61.2 84 31.0
Hund04109 Selenicereus undatus HOM05D018245 ORTHO05D000006 4.0e-08 61.2 85 32.9
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 4.0e-08 61.2 86 31.4
PGSC0003DMG400021776 Solanum tuberosum HOM05D000003 ORTHO05D000007 4.0e-08 61.2 57 43.9
Nitab4.5_0022053g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000007 5.2e-08 60.8 86 26.7
EL10Ac4g08483 Beta vulgaris HOM05D000003 ORTHO05D000007 6.8e-08 60.5 83 37.3
CANSAT01G0517 Cannabis sativa HOM05D000003 ORTHO05D000007 6.8e-08 60.5 84 31.0
CANSAT25G2441 Cannabis sativa HOM05D000003 ORTHO05D000007 6.8e-08 60.5 86 33.7
CANSAT56G0142 Cannabis sativa HOM05D000003 ORTHO05D000007 6.8e-08 60.5 84 32.1
Sopen03g013440 Solanum pennellii HOM05D000003 ORTHO05D000007 8.9e-08 60.1 86 31.4
Ah.11g039890 Amaranthus hybridus HOM05D000003 ORTHO05D000007 1.2e-07 59.7 62 33.9
CANSAT78G1995 Cannabis sativa HOM05D000003 ORTHO05D000007 1.5e-07 59.3 84 32.1
Dinv25826 Davidia involucrata HOM05D000003 ORTHO05D000007 1.5e-07 59.3 60 36.7
Ah.10g026810 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.0e-07 58.9 60 35.0
EL10Ac3g05991 Beta vulgaris HOM05D015602 ORTHO05D006373 2.0e-07 58.9 86 34.9
Dinv02179 Davidia involucrata HOM05D000003 ORTHO05D000007 2.0e-07 58.9 60 41.7
Sopen04g011860 Solanum pennellii HOM05D000003 ORTHO05D000007 2.0e-07 58.9 87 28.7
Ah.02g122310 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.6e-07 58.5 59 35.6
Ah.12g063330 Amaranthus hybridus HOM05D000003 ORTHO05D000007 2.6e-07 58.5 88 30.7
EL10As22g24223 Beta vulgaris HOM05D000003 ORTHO05D000007 2.6e-07 58.5 89 31.5
CANSAT25G2713 Cannabis sativa HOM05D000003 ORTHO05D000007 2.6e-07 58.5 90 32.2
Dinv19970 Davidia involucrata HOM05D000003 ORTHO05D000007 2.6e-07 58.5 84 34.5
Nitab4.5_0000021g0750 Nicotiana tabacum HOM05D000003 ORTHO05D000007 2.6e-07 58.5 90 27.8
CANSAT11G2544 Cannabis sativa HOM05D000003 ORTHO05D000007 3.4e-07 58.2 85 31.8
Sopen00g008520 Solanum pennellii HOM05D000003 ORTHO05D000004 3.4e-07 58.2 87 28.7
Dinv19765 Davidia involucrata HOM05D000003 ORTHO05D000007 4.4e-07 57.8 60 43.3
Dinv25290 Davidia involucrata HOM05D000003 ORTHO05D000007 4.4e-07 57.8 60 43.3
Nitab4.5_0000829g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.4e-07 57.8 58 36.2
Nitab4.5_0003434g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000007 4.4e-07 57.8 90 28.9
Peaxi162Scf01102g00016 Petunia axillaris HOM05D000003 ORTHO05D000007 5.8e-07 57.4 56 37.5
PGSC0003DMG400026698 Solanum tuberosum HOM05D000003 ORTHO05D000007 5.8e-07 57.4 90 31.1
EL10Ac7g16542 Beta vulgaris HOM05D000003 ORTHO05D000007 7.5e-07 57.0 85 42.4
AUR62037255 Chenopodium quinoa HOM05D000003 ORTHO05D000007 7.5e-07 57.0 60 40.0
Dinv01737 Davidia involucrata HOM05D000003 ORTHO05D000007 7.5e-07 57.0 60 40.0
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-07 57.0 87 28.7
Sopen05g020920 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-07 57.0 87 27.6
Sopen09g011430 Solanum pennellii HOM05D000003 ORTHO05D000004 7.5e-07 57.0 87 27.6
Dinv10031 Davidia involucrata HOM05D000003 ORTHO05D000007 9.8e-07 56.6 60 40.0
Sopen04g018180 Solanum pennellii HOM05D000003 ORTHO05D000007 9.8e-07 56.6 87 28.7
Sopen10g008120 Solanum pennellii HOM05D000003 ORTHO05D000004 9.8e-07 56.6 87 28.7
CANSAT56G3933 Cannabis sativa HOM05D000003 ORTHO05D000007 1.3e-06 56.2 86 29.1
Nitab4.5_0007274g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.3e-06 56.2 58 37.9
Sopen00g011080 Solanum pennellii HOM05D000003 ORTHO05D000006 1.3e-06 56.2 87 28.7
vmacro06198 Vaccinium macrocarpon HOM05D000522 ORTHO05D004380 1.3e-06 56.2 61 37.7
CANSAT80G2516 Cannabis sativa HOM05D000003 ORTHO05D000007 1.7e-06 55.8 61 39.3
Dinv07781 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 55.8 60 38.3
Dinv22485 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 55.8 60 35.0
Dinv39840 Davidia involucrata HOM05D000003 ORTHO05D000007 1.7e-06 55.8 83 32.5
Nitab4.5_0003396g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000007 1.7e-06 55.8 58 36.2
PSO782G0923 Papaver somniferum HOM05D002145 ORTHO05D000007 1.7e-06 55.8 87 28.7
PSO832G4581 Papaver somniferum HOM05D002145 ORTHO05D000007 1.7e-06 55.8 87 27.6
Sopen00g009320 Solanum pennellii HOM05D000003 ORTHO05D000007 2.2e-06 55.5 87 27.6
Sopen00g011480 Solanum pennellii HOM05D000003 ORTHO05D000007 2.2e-06 55.5 86 27.9
Sopen00g012500 Solanum pennellii HOM05D000003 ORTHO05D000007 2.2e-06 55.5 62 35.5
PSO063G5735 Papaver somniferum HOM05D002145 ORTHO05D000007 2.9e-06 55.1 85 27.1
Hund16135 Selenicereus undatus HOM05D003845 ORTHO05D004161 2.9e-06 55.1 58 39.7
CANSAT54G1871 Cannabis sativa HOM05D000003 ORTHO05D000007 3.7e-06 54.7 61 36.1
CANSAT54G2645 Cannabis sativa HOM05D000003 ORTHO05D000007 3.7e-06 54.7 90 28.9
Dinv18497 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-06 54.7 60 38.3
Dinv25289 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-06 54.7 60 41.7
Dinv31264 Davidia involucrata HOM05D000003 ORTHO05D000007 3.7e-06 54.7 60 36.7
CANSAT25G1407 Cannabis sativa HOM05D000003 ORTHO05D000007 4.9e-06 54.3 85 30.6
Dinv01877 Davidia involucrata HOM05D000003 ORTHO05D000007 4.9e-06 54.3 58 39.7
Sopen00g012700 Solanum pennellii HOM05D000003 ORTHO05D000006 4.9e-06 54.3 58 36.2
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-06 54.3 87 26.4
PGSC0003DMG402017944 Solanum tuberosum HOM05D000003 ORTHO05D000007 4.9e-06 54.3 87 29.9
CANSAT80G1054 Cannabis sativa HOM05D000003 ORTHO05D000007 6.4e-06 53.9 56 41.1
Dinv05825 Davidia involucrata HOM05D000003 ORTHO05D000007 6.4e-06 53.9 60 35.0
Nitab4.5_0001653g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000007 6.4e-06 53.9 90 27.8
AUR62042346 Chenopodium quinoa HOM05D000003 ORTHO05D000007 8.3e-06 53.5 84 31.0
Dinv37987 Davidia involucrata HOM05D000633 ORTHO05D000477 8.3e-06 53.5 60 36.7
Nitab4.5_0001904g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000007 8.3e-06 53.5 86 26.7


User provided reference genes

Program Settings