Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 3.8e-248 861.3 516 100.0
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 4.9e-147 525.4 415 68.7
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 5.1e-136 488.8 375 76.3
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.2e-132 477.6 520 56.2
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 4.5e-124 449.1 509 52.1
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 5.5e-122 442.2 522 57.5
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.2e-121 441.0 501 52.1
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 2.7e-121 439.9 413 59.3
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 6.1e-121 438.7 521 51.2
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 7.9e-121 438.3 419 63.2
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 3.9e-120 436.0 401 62.8
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 5.1e-120 435.6 523 50.9
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 6.7e-120 435.3 417 58.0
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 1.1e-119 434.5 523 50.7
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.0e-119 433.7 526 56.5
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 2.0e-119 433.7 521 55.5
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 5.7e-119 432.2 519 56.6
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 9.7e-119 431.4 516 51.4
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 9.7e-119 431.4 501 51.5
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 1.3e-118 431.0 517 56.7
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 1.7e-118 430.6 413 64.6
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 2.8e-118 429.9 403 66.3
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 3.7e-118 429.5 517 52.4
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 6.3e-118 428.7 414 62.3
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 1.1e-117 427.9 501 54.5
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 1.1e-117 427.9 523 56.0
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.4e-117 427.6 393 59.5
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 3.1e-117 426.4 517 56.3
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 3.5e-116 422.9 396 61.6
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 4.5e-116 422.5 412 57.8
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 7.7e-116 421.8 413 57.1
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 1.3e-115 421.0 397 65.2
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 2.2e-115 420.2 392 66.3
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 2.9e-115 419.9 418 63.4
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 8.5e-115 418.3 393 62.8
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.1e-114 417.9 413 56.9
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 1.9e-114 417.2 413 57.4
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 3.2e-114 416.4 413 63.4
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 5.5e-114 415.6 426 62.4
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 5.5e-114 415.6 392 59.2
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 7.2e-114 415.2 424 63.7
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 7.2e-114 415.2 421 58.9
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 9.4e-114 414.8 517 57.8
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 4.7e-113 412.5 396 65.9
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 1.0e-112 411.4 516 51.6
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.4e-112 411.0 413 55.4
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 1.4e-112 411.0 397 65.0
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 5.2e-112 409.1 392 59.2
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 6.7e-112 408.7 413 58.1
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 6.7e-112 408.7 392 57.4
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 8.8e-112 408.3 405 57.3
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 1.1e-111 407.9 393 60.6
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.5e-111 407.5 439 57.2
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 1.5e-111 407.5 391 60.1
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 2.0e-111 407.1 507 51.1
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 2.0e-111 407.1 392 64.5
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 5.7e-111 405.6 413 59.6
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 7.4e-111 405.2 398 61.3
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 9.7e-111 404.8 413 58.6
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.7e-111 404.8 396 55.8
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 9.7e-111 404.8 396 55.6
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 9.7e-111 404.8 414 59.7
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.3e-110 404.4 495 55.6
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 3.7e-110 402.9 413 59.3
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 4.8e-110 402.5 403 65.0
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 1.1e-109 401.4 392 57.7
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 1.8e-109 400.6 392 66.3
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 2.4e-109 400.2 439 51.7
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 4.1e-109 399.4 398 59.0
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 5.3e-109 399.1 402 55.2
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 7.0e-109 398.7 403 66.3
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 9.1e-109 398.3 493 55.8
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 1.2e-108 397.9 398 64.3
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 1.2e-108 397.9 397 65.5
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.0e-108 397.1 412 54.6
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 2.0e-108 397.1 390 63.8
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 2.6e-108 396.7 392 58.2
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 2.6e-108 396.7 392 68.4
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 3.5e-108 396.4 414 53.6
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.5e-108 396.0 432 52.3
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 4.5e-108 396.0 392 64.5
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 4.5e-108 396.0 397 57.2
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 5.9e-108 395.6 397 65.7
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 5.9e-108 395.6 397 65.2
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 5.9e-108 395.6 397 65.7
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 1.3e-107 394.4 402 59.2
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 1.3e-107 394.4 402 59.2
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.3e-107 394.4 417 53.2
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 1.7e-107 394.0 392 60.2
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 2.2e-107 393.7 402 58.5
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 2.2e-107 393.7 402 58.5
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.5e-107 392.1 505 47.5
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 8.5e-107 391.7 403 53.8
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.1e-106 391.3 402 59.5
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 2.5e-106 390.2 392 59.9
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 2.5e-106 390.2 344 66.0
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.2e-106 389.8 401 65.3
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 3.2e-106 389.8 401 64.6
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 1.6e-105 387.5 392 62.2
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 6.1e-105 385.6 365 66.3
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 1.8e-104 384.0 396 61.9
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 8.3e-102 375.2 397 53.4
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.8e-101 374.0 397 52.6
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 5.9e-100 369.0 389 53.7
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 3.8e-99 366.3 416 54.6
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 5.0e-99 365.9 395 55.4
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 1.5e-98 364.4 398 57.0
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.5e-98 364.4 374 61.2
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.2e-96 355.9 402 56.7
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 8.8e-96 355.1 402 56.2
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 4.8e-94 349.4 403 47.6
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 4.8e-94 349.4 480 46.7
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 3.1e-93 346.7 426 54.9
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.1e-93 345.1 410 55.9
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 2.9e-91 340.1 428 52.3
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 3.8e-91 339.7 452 49.8
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 4.7e-89 332.8 394 48.5
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 4.1e-85 319.7 390 53.3
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 4.5e-84 316.2 376 50.3
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 8.6e-83 312.0 372 47.6
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.1e-82 311.6 162 87.0
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 6.1e-81 305.8 391 44.5
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 1.0e-80 305.1 189 77.2
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 1.4e-80 304.7 375 51.5
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.2e-76 291.6 388 44.1
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.9e-74 284.3 361 44.6
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 2.7e-68 263.8 335 48.7
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 5.8e-63 246.1 142 81.7
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.9e-53 214.5 111 85.6
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 4.6e-52 209.9 106 87.7
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 1.7e-51 208.0 392 46.7
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 8.7e-51 205.7 398 43.2
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 4.8e-49 199.9 288 43.8
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 6.4e-46 189.5 113 73.5
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.0e-44 183.0 169 55.6
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 1.8e-40 171.4 89 84.3
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 1.0e-35 155.6 394 30.7
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.3e-33 148.7 398 34.7
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 6.5e-30 136.3 131 60.3
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 5.5e-29 133.3 291 33.3
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 3.1e-24 117.5 118 55.9
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 4.6e-20 103.6 74 67.6
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 8.5e-14 82.8 42 85.7
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.0e-11 75.9 81 46.9


User provided reference genes

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